HHsearch 1.5 NAME c2i0nA_ FAM FILE c2i0nA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2i0nA_.a3m DATE Thu Mar 11 11:44:06 2010 LENG 80 match states, 80 columns in multiple alignment FILT 108 out of 3196 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4470 0.6774 SEQ >ss_dssp CCSCCCCCCCCEEEESSCBCCCSSSSCCBCSSEEEEEEEESSSSSEEEEEETTEEEEEEGGGEEEESSCCCCCCCCCCCC >sa_dssp EEEEEDEEEBDCACAEDDBECEEEECACBEEDCBACBDEDDEEEDDBDADBEEDEBBACDEBBDDCEECEECEDEEEEEE >ss_pred CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEHHEEEECCCCCCCCCCCCCCC >ss_conf 98888877875899950307888876336179889996651677458998279859987410899168887687755899 >Consensus xxPxxxxxxxxxxxalydyxaxxxxeLsxxxGdxixVxxxxxxxwwxxxxxxgxxGxxPxxyvxxxxxxxxxxxpxxPxx >c2i0nA_ MGPLGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILLSDVPPPQPVHPVA >UniRef50_C4Q9E4(689-754:1611) Expressed protein n=1 Tax=Schistosoma mansoni RepID=C4Q9E4_SCHMA E=2e-05 s/c=0.76 id=17% cov=80% ------------ATVVHEFRAKKSNELDLVVHETVVLLNNEPQNGWIKVRslIDGNEGLVPISYLKLSSMDVPKHNS----- >UniRef50_UPI00016E7F1D(11-88:805) UPI00016E7F1D related cluster n=3 Tax=Takifugu rubripes RepID=UPI00016E7F1D E=7e-05 s/c=0.62 id=21% cov=89% ----GVPSRTVVLEAQYDYNyrANDGRQVCIREGERFILLKKTNADWWQVRRIGAASKakplYVPATYVTEV-SIAPIPSP----- >UniRef50_Q4RDD5(12-84:84) Chromosome undetermined SCAF16820, whole genome shotgun sequence. (Fragment) n=11 Tax=Euteleostomi RepID=Q4RDD5_TETNG E=1e-05 s/c=0.70 id=19% cov=92% -GSCTAPFPARHFVVVRPHTAQAEGEVNLYKGDRVKVLS-IGEGGFWEGSTRGLVGWFPADCVEETPSKASEERS----- >UniRef50_C5DE45(27-97:1025) KLTH0C06182p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DE45_LACTC E=0.0004 s/c=0.65 id=18% cov=84% ---LGSISSGPLYITITEYSKRMEDELDMKPGDKIQVitdDEEYNDGWYYGRNLRtNEEGLYPKVFTQEISKP----------- >UniRef50_C3Y473(421-495:1604) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y473_BRAFL E=3e-06 s/c=0.70 id=21% cov=89% --------SGKYARALFEFEPSVEADIRLVPDQLYRIIRVVDKDWMEVQDEAGQAGVCPASYLHIMDGSykdshTPAPSETQP-- >UniRef50_UPI000186F14A(229-296:348) Peroxisomal membrane protein PEX13, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F14A E=0.0002 s/c=0.69 id=18% cov=78% -----AEQPGSLGIGMYDFYAASNQELSISSQQKLMIAPKkfqptDCPGWILACNENSKIGLVPSNYIGIL-------------- >UniRef50_C0S8D2(5-85:1388) Cytokinesis protein Cyk3 n=4 Tax=Onygenales RepID=C0S8D2_PARBP E=2e-06 s/c=0.66 id=20% cov=99% -APVLPTRFPCWCQAVYSWGGETKRDLGFVEGDLIECLNAGDGSWWTGRLRRNkrMVGVFPSNFVKVLGDDfAPGSRSISPM- >UniRef50_P40073(296-367:367) Protein SSU81 n=10 Tax=Saccharomycetaceae RepID=SSU81_YEAST E=4e-05 s/c=0.69 id=21% cov=89% ---IGDDNFIYKAKALYPydADDDDAYEISFEQNEILQVSDIEGR-WWKARRANGETGIIPSNYVQLIDGPEEMHR------ >UniRef50_Q4RZ53(301-372:376) Chromosome 7 SCAF14966, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RZ53_TETNG E=0.0008 s/c=0.62 id=16% cov=91% --PPVPPQVEEEFYTIADFQTTIPDGISFQAGVKVEVIEK-NASGWWYIQIDDKEGWAPATFIDKYKKTSNALRP----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2599 * 2236 959 * * * * * * 3206 * * 1 0 * * * * * * 3659 0 0 G 2 2210 * * * * 1373 * * * * * * * * 4247 1535 * * * * 2 0 * * * * * * 4925 0 0 P 3 * * * * * * * * * * * * 118 * * 4548 4816 * * * 3 0 * * * * * * 5655 0 0 L 4 3517 4181 * 4995 4657 4822 * 2765 * 1936 5206 * 3612 * * * 3645 3482 5013 4907 4 44 5049 * 0 * * * 6143 1000 0 G 5 3910 * 5255 4031 * 1386 * * * 5410 * 5280 2787 5109 4581 3200 4055 5077 * * 5 0 * * * * * * 6459 0 0 S 6 2128 * 3697 3582 * 5415 * 5178 3750 4547 5009 * 2999 5104 * 2261 5819 5018 * * 6 0 * * * * * * 6651 0 0 P 7 4592 * 4029 2467 * 5797 * 4602 3917 4904 * * 1307 * * 5828 3444 4500 * * 7 35 5383 * 1000 1000 * * 6920 1093 0 E 8 4182 * 2933 2996 6168 4039 * * 3480 6232 * 4686 4479 2343 6197 2852 4602 5770 * 5760 8 0 * * * * * * 6989 0 0 F 9 5425 * * 2921 3151 4620 * 5448 3610 * * 4175 3508 4090 3150 2880 4926 3480 * 6189 9 0 * * * * * * 7056 0 0 A 10 2773 * 6063 3016 6260 3115 5937 5465 4358 4777 5193 6450 3661 3515 4338 3280 4157 4864 * 6113 10 61 5520 5650 0 * * * 7095 1689 0 K 11 * 5295 5680 2999 5450 6477 * * 2914 4539 6093 4588 2585 4047 2952 3668 3992 5547 * 4490 11 13 6748 * 3000 193 * 0 7040 1000 1101 Y 12 * * * 6221 3276 * 3180 3687 4098 2904 5489 * * 3487 3843 6223 5231 3145 5461 2772 12 93 4726 5348 1216 812 0 * 6985 2209 1101 A 13 1858 3660 * * 4033 3474 6026 6191 6659 4328 5700 * * * * * * 1641 * 3937 13 15 6616 * 2585 263 0 * 7001 1000 1137 R 14 * * * 4102 * * * 3175 3107 5556 * * * 3175 1830 * 4160 2156 * 5538 14 13 * 6805 * * * * 7069 0 0 A 15 800 4118 * * * 5373 * * * * 5097 * * * * 5772 3981 2100 * * 15 0 * * * * 0 * 7085 0 1000 L 16 6860 6706 * 6531 6364 * * 2371 3918 1261 5359 * * 4157 6000 5171 4265 3234 * * 16 13 6750 * 1000 1000 * * 7083 1000 0 K 17 3670 6514 6560 6842 2572 * 3397 * 4494 * 6600 6029 * 5520 4390 * 5886 5858 5027 1238 17 12 6951 * 1000 1000 * * 7083 1000 0 D 18 3538 * 1244 4478 * 5312 6364 * 6824 6500 * 3762 3334 6061 4402 3124 4656 * * * 18 24 6918 6969 1000 1000 * * 7083 1000 0 Y 19 5940 * * * 1419 * 4343 * * * * * * * 6467 * * * 4445 991 19 66 4476 * 1494 632 0 * 7098 2953 1000 N 20 5443 * 3382 2522 * 6014 5687 4692 3758 5189 6903 3189 4867 4220 3984 4710 3281 3224 * 6071 20 25 5867 * 1000 1000 * * 7100 1000 0 V 21 1247 * 5946 6904 * 3169 * * 4547 6177 * 6261 2237 * 6938 3361 4893 6486 * 6507 21 25 5835 * 2138 372 * * 7100 1752 0 S 22 3852 * 3935 3198 * 4218 6177 * 3483 * 6909 4198 6242 2776 2795 3418 3204 5477 * 6831 22 30 5585 * 2797 224 * * 7100 1645 0 D 23 4397 * 2676 3916 5644 2743 3975 6577 4934 6879 4924 3260 * 4187 5057 2794 4213 6443 * 6226 23 36 5909 6926 1905 448 * * 7100 1706 0 T 24 3698 6592 2887 2357 6583 4675 5071 6253 3858 * * 4201 2166 4871 6254 4279 5054 6094 * * 24 20 7216 7143 0 * * 0 7101 1000 1000 S 25 5056 6248 1611 3160 * 3176 5054 6716 4178 6818 * 3312 6021 4558 4930 5548 3754 * * 5937 25 0 * * * * 955 1047 7105 0 1811 L 26 6173 * 2477 808 * 5677 5575 6582 * 4688 * * * 3309 * * 5468 * * 5509 26 82 4182 * 1195 828 0 * 7101 2771 1000 L 27 * 5104 * * * * * 2877 * 485 4521 * * * * * * 3706 * * 27 0 * * * * * * 7100 0 0 P 28 4504 4660 4271 3502 * 4491 6219 * 5305 * * 3337 3451 * 5175 1453 3467 5700 * * 28 0 * * * * * * 7100 0 0 F 29 5911 * * * 1375 * * 3065 * 1566 5287 * * * * * * 3122 * * 29 0 * * * * * * 7100 0 0 K 30 4826 6261 3999 2953 6242 6587 4797 4792 2509 4393 * 5472 7106 4232 2758 3593 5651 3325 * 7035 30 0 * * * * * * 7100 0 0 R 31 3002 * * 2404 * * 6590 5785 1750 5344 * * 4388 4093 3829 6071 5497 3035 * * 31 11 7104 * 0 * * * 7100 1000 0 N 32 5872 * 3237 6261 * 383 5957 * * * * 4127 * 6071 6841 * * * * * 32 0 * * * * * * 7100 0 0 D 33 5389 * 944 2016 * 6542 * * 5259 * * * * 2884 * 7112 6815 5582 * * 33 0 * * * * * * 7100 0 0 I 34 5219 * 6929 5126 5380 * 5464 2285 3154 3027 6597 * 4636 5820 3817 6529 3618 2621 6581 4476 34 0 * * * * * * 7100 0 0 I 35 * * * * 4802 * * 1439 * 1627 4951 * * * * * * 2326 * 4657 35 8 * 7556 * * * * 7100 0 0 T 36 5341 6701 4247 3069 4411 * 4965 3387 4400 3855 5418 5789 * 4277 3515 6595 2861 3673 5903 3659 36 45 5035 * 766 1279 0 * 7105 2297 1000 I 37 6590 5116 * 6893 * * * 2232 * 2419 * 5997 * * * 6590 * 925 * * 37 78 4759 5988 3259 159 * * 7100 2670 0 T 38 5998 5982 5834 4203 4415 6729 4078 2248 * 1830 6917 6537 6556 5223 7251 4785 3593 3701 * 5042 38 14 * 6732 * * 0 * 7098 0 1806 F 39 4382 6338 3340 2130 6482 3601 * * 3690 5192 6833 3839 4606 4184 4077 3363 5308 4647 * 5826 39 95 7072 4150 0 * 0 * 7095 1000 1000 K 40 4181 6481 3996 3402 6661 * 6161 4212 1995 * 5213 6711 5174 3009 3147 4411 4891 4958 5630 6224 40 84 5283 5026 1751 509 320 2330 7042 1760 3232 D 41 4809 6493 2851 3054 * 4823 4794 4254 4575 5838 5476 6197 4133 4128 5185 2449 4340 4145 6702 4854 41 83 4599 6090 1543 606 0 * 7055 2657 2681 Q 42 5004 5463 1884 3772 * 3148 4546 * 6728 * * 2558 3755 4183 * 3409 6029 6569 * 5793 42 49 5317 6948 1180 840 0 * 7081 2166 1000 E 43 4586 * 2131 3220 * 3294 5750 * 3758 * 6625 2914 3178 4462 5168 4209 5328 * * 5448 43 77 5247 5303 1292 757 0 * 7103 2112 1000 N 44 * * 2104 3417 * 1809 * * 5044 * * 3449 5210 5062 4267 4200 * * 3418 6691 44 38 5735 7160 0 * 0 * 7095 1858 2107 K 45 6281 4933 5091 4299 * 2266 * 6588 6483 * 6565 * 5929 7105 6175 5626 5650 * 871 6664 45 101 4717 5086 1584 586 0 * 7103 2571 1000 W 46 6710 4892 6613 5706 3723 5585 * 4842 6845 4279 5659 * * 5989 6321 6441 5828 5841 942 3052 46 0 * * * * 0 * 7105 0 2472 F 47 3945 6568 6829 3488 3493 4934 * 4617 3887 3342 4433 7129 * 5867 4768 4557 4175 5335 2619 3246 47 38 5854 6867 0 * * * 7100 1604 0 M 48 2842 4662 6371 3563 5277 1948 * * 4239 4750 5063 * * 5748 3965 * 5370 3049 5493 3848 48 56 5485 6020 2001 415 0 * 7094 1697 1000 G 49 4228 4479 * 3555 * 2202 6144 5077 3707 5603 5658 4924 * 4384 2935 5787 4228 3082 6751 5151 49 65 4508 * 2266 336 0 * 7102 2942 1714 Q 50 5294 4834 4370 2939 5619 6257 4896 4710 4109 4067 5501 2758 5202 4472 2914 4381 3941 5134 * 5545 50 89 4258 6993 407 2024 * * 7100 3314 0 L 51 4278 6232 5017 3950 4965 6817 5615 3371 3176 3230 6675 5614 4954 4620 2949 3422 4863 3854 * 4843 51 54 4765 * 778 1262 0 * 7098 2730 1000 N 52 4831 * 2846 4197 6492 2767 4977 * 3422 * * 3199 6284 4661 3357 3387 3186 6226 * 6572 52 175 3126 * 1153 861 * * 7100 4085 0 G 53 5867 * 3652 4600 * 916 4452 * 5994 6528 * 3770 * 5885 5913 3484 4897 5890 * 6226 53 160 3253 * 2105 382 * * 7100 4278 0 K 54 4151 6760 6607 3105 * 5048 5012 * 2464 4881 5990 4551 6206 2468 2281 6074 4343 6776 * * 54 63 4551 * 864 1150 * * 7093 2906 0 E 55 4580 5924 * 2300 6892 * * 4154 3766 4343 * * 5902 3532 2689 3824 4166 3061 4783 6576 55 69 4414 * 804 1227 * * 7093 3109 0 G 56 * * * * * 52 * * 5865 * * * * * * 5785 * * * * 56 25 5865 * 2000 415 * * 7093 1000 0 S 57 * 6475 6237 * 3443 * * 2971 6636 1946 4366 * * * 6761 5560 * 3567 2539 2727 57 0 * * * * * * 7093 0 0 F 58 4242 6433 * * 1465 * * 2799 * 4257 * * * * * * 6776 1579 * 4891 58 0 * * * * * * 7093 0 0 P 59 6452 * * * * 6083 * * * * * * 38 * * * * * * * 59 0 * * * * * * 7093 0 0 V 60 2060 7158 7091 3838 6865 5825 5589 5757 3449 5073 * * 6174 5703 4137 1937 4058 3677 * * 60 0 * * * * * * 7093 0 0 D 61 3950 * 4602 4679 6334 5125 6206 6573 5784 4920 * 1714 7125 5591 * 2033 3218 5362 6607 5683 61 0 * * * * * * 7093 0 0 H 62 6253 4385 * * 1946 * 3919 4784 * 5920 6150 * * * * * 6237 6902 * 930 62 13 6812 * 2000 415 * * 7093 1000 0 V 63 3932 5467 * * 4769 * * 2947 * 2297 * * * * * * 3697 1105 * * 63 23 5964 * 2237 344 * * 7095 1747 0 E 64 3620 * 4992 1766 * 4885 4648 5690 3048 * 6671 7182 6814 2672 3464 4892 4312 6802 * 6256 64 42 7094 5527 2000 415 * * 7095 1000 0 I 65 5557 * 5612 2848 5889 * 5461 2657 2995 3377 6466 * 2651 6649 5705 6330 4733 2738 * * 65 29 5642 * 1000 1000 0 * 7069 1141 2261 L 66 3537 * * 6805 6004 6509 4778 2179 * 1711 4932 6209 * 6295 6987 5031 6710 2745 * 4069 66 31 * 5558 * * * * 6974 0 0 L 67 4248 * 3571 3788 6673 3684 * 4410 3678 5381 6397 4312 3462 5204 4012 2869 3658 3383 * * 67 0 * * * * 0 * 6994 0 1000 S 68 3875 6060 3542 3999 * 3522 5159 5727 2918 5533 6243 4301 3697 * 6650 2283 3664 4908 6390 * 68 15 6602 * 3807 107 * * 6997 1000 0 D 69 5193 5696 2270 3495 * 4888 * 4892 4441 4281 5485 5490 2192 5955 5158 4340 3455 6033 5846 6439 69 78 4659 6262 1231 801 * * 7036 1871 0 V 70 3100 * 6011 4062 * 6024 5918 5346 5354 4055 5780 4500 2517 4167 6345 2908 3362 2930 * * 70 33 5449 * 1585 585 * 0 6975 1626 1000 P 71 3849 * 6568 4752 5893 3447 5960 5637 3890 5029 6405 5102 1431 6126 5029 3284 4934 4383 * * 71 0 * * * * 0 * 6855 0 1000 P 72 4073 * 4349 4952 * 5210 5858 4569 3696 3616 4541 4878 2033 5664 4282 4247 4553 3381 6288 5833 72 0 * * * * * * 6811 0 0 P 73 4276 * * 4094 * * 2930 5499 5099 5605 5837 4044 1308 5607 4500 3266 5826 5759 * * 73 0 * * * * * * 6808 0 0 Q 74 5528 * 5796 3714 * * * 5722 4413 5559 5598 4182 4280 2566 1839 3435 3457 4723 * * 74 93 4001 * 1861 464 * * 6717 2162 0 P 75 4148 * 4262 3703 * * * * * 5702 * 5553 942 * * 2087 * 5787 * * 75 0 * * * * * * 6497 0 0 V 76 2951 * * 5130 * * 3575 2620 4019 2572 * * 5221 * * 5166 3363 2225 * * 76 0 * * * * * * 5922 0 0 H 77 4684 * 3765 2425 * 4938 3548 * 4813 * 2955 4721 3627 4429 4909 2860 4937 * * 4330 77 0 * * * * * * 5582 0 0 P 78 3768 * * * * * * * * * * * 110 * * * * * * * 78 0 * * * * * * 5461 0 0 V 79 2555 * * * * * * 4182 * 3191 3172 * 4000 * * * 2849 1502 * * 79 0 * * * * * * 4851 0 0 A 80 561 * * * * * * * * * * * * * * 1634 * * * * 80 0 * * 0 * * * 3823 0 0 //