HHsearch 1.5 NAME c2eqjA_ FAM FILE c2eqjA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2eqjA_.a3m DATE Thu Mar 11 12:49:47 2010 LENG 66 match states, 66 columns in multiple alignment FILT 17 out of 21 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.3606 -1.9758 SEQ >ss_dssp CCSSCCCCCCCCCSCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTTEEEEEETTTEECCCC >sa_dssp EEEEEEEEEDEDEBDEDCEBDADCEEDEDDEACADECCDEEDAACADAEEEDECDBDCEBBEDDEE >ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEECCEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCC >ss_conf 987777887512257674899997389682303677138786499998589606999750133469 >Consensus xxxxxsxxxxxxxfxeGeDVLxrwxDGxfYLGtIxkVxxxxxxClVxFeDnSxxWvxxKdixxxax >c2eqjA_ GSSGSSGKKPACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGAT >UniRef50_UPI000180C563(150-207:710) PREDICTED: similar to metal response element binding transcription factor 2 n=1 Tax=Ciona intestinalis RepID=UPI000180C563 E=1e-11 s/c=1.23 id=52% cov=76% -------------FKEGHDVLARWSDGLYYLGSVCKVDDFQHKCYVQFEDKSVFWAQFKDLQ---- >UniRef50_B3RYM1(20-66:493) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RYM1_TRIAD E=3e-09 s/c=1.34 id=46% cov=56% ----------------GDHVLVHWRDGMYYLGNVRKVNKRDRSCLVEFEDAS-------------- >UniRef50_UPI00016E1031(3-57:571) UPI00016E1031 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E1031 E=7e-17 s/c=1.60 id=58% cov=80% ----------ASNLTVGQFVLCHWSDGLYYLGKIHRVSPPRQSCFVTFEDNSKFWVLWKDIQ---- >UniRef50_UPI0000D577CE(22-69:685) PREDICTED: similar to conserved hypothetical protein n=1 Tax=Tribolium castaneum RepID=UPI0000D577CE E=6e-13 s/c=1.56 id=39% cov=74% -------------FGPGQDVLLKQKDGRYYLGTVVEVDGARERCLVKFGDNTDSWSSFKDL----- >UniRef50_B0WGH8(187-234:1029) Putative uncharacterized protein n=2 Tax=Culicini RepID=B0WGH8_CULQU E=4e-10 s/c=1.37 id=43% cov=64% ------------KFKLQEDVLVEHKDGRFYLGTV--IAIGTGQCLVRFNDNTECW----------- >UniRef50_Q290N1(356-395:1045) GA18665 n=3 Tax=Sophophora RepID=Q290N1_DROPS E=0.0001 s/c=1.18 id=38% cov=56% -----------------EDVFVKCDDGRLYLGTI--VGKKPDQFLIRFDDKSEQW----------- >UniRef50_A2AB23(24-82:227) PHD finger protein 1 (Fragment) n=3 Tax=Euteleostomi RepID=A2AB23_HUMAN E=5e-16 s/c=1.45 id=57% cov=91% ----TSGPRP--RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAA- >UniRef50_UPI00017916DC(32-76:671) PREDICTED: similar to polycomblike 2 n=1 Tax=Acyrthosiphon pisum RepID=UPI00017916DC E=6e-11 s/c=1.52 id=35% cov=70% ----------------GEEVLVHLNDERFYLGFIAKLRYKESKCLVKFGDNTVKWVFLKNV----- >UniRef50_Q25473(212-253:558) Zinc finger protein n=2 Tax=Molgula oculata RepID=Q25473_MOLOC E=6e-08 s/c=1.39 id=50% cov=61% -------------FEEGEDVLARWTDGNFYPATVVKVKD-TGSCVVMYFDGMK------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1278 0 0 S 2 * 1096 * * * * * * * * * * * * * 910 * * * * 2 0 * * * * * * 1278 0 0 S 3 * * * * * * * * * * * * * * 1096 910 * * * * 3 0 * * * * * * 1278 0 0 G 4 * * * * * 0 * * * * * * * * * * * * * * 4 0 * * * * * * 1278 0 0 S 5 * * * * * * * * * * * * * * * 585 1585 * * * 5 0 * * * * * * 1473 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1473 0 0 G 7 * 1701 * * * 530 * * * * * * * * * * * * * * 7 0 * * * * * * 1473 0 0 K 8 * * * * * * * * 1477 * * * 1585 * 1701 * * * * * 8 530 * 1701 * * * * 1473 0 0 K 9 * * * * * * * * 953 * * * * * 1048 * * * * * 9 0 * * * * * 0 1328 0 1000 P 10 * * * * * * * * * * * * 0 * * * * * * * 10 953 * 1048 * * * 0 1328 0 1000 A 11 0 * * * * * * * * * * * * * * * * * * * 11 0 * * * * * 0 1323 0 1313 C 12 * 1000 * * * * * * * * * * * * * 1000 * * * * 12 0 * * * * 0 * 1323 0 1313 K 13 * * * 2845 * * * * 1367 * * 2610 * * 1693 * * * * * 13 0 * * * * * * 2030 0 0 F 14 * * * * 638 * * * * 1874 * * * * * * * 3563 * * 14 0 * * * * * * 2441 0 0 E 15 * * * 2170 * 3321 * * 2184 * * * * * * 1901 3352 * 3443 * 15 0 * * * * * * 2441 0 0 E 16 * * * 776 * * 3318 * * 3088 * * 3321 * * * * 3352 * * 16 0 * * * * * * 2441 0 0 G 17 * * * * * 130 * * * * * * * 3534 * * * * * * 17 0 * * * * * * 2662 0 0 Q 18 * * 2190 1271 * * 3996 * * * * * * 1719 * * * * * * 18 0 * * * * * * 2908 0 0 D 19 * * 449 3473 4098 * 3808 * * * * * * * * * * * * 4394 19 0 * * * * * * 2908 0 0 V 20 * * * * * * * * * * * * * * * * * 0 * * 20 0 * * * * * * 2908 0 0 L 21 * * * * 2543 * * * * 272 * * * * * * * * * * 21 0 * * * * * * 2908 0 0 A 22 1495 3238 * * * * * 4063 * 3238 * * * * * 4393 * 1618 * * 22 0 * * * * * * 2908 0 0 R 23 * * * 4246 * * 2186 * 2166 * * * * 3290 1314 * * * * * 23 0 * * * * * * 2908 0 0 W 24 * 2543 * * * * 3219 * * 3473 * * * 4284 * * * * 787 * 24 0 * * * * * * 2908 0 0 S 25 * * 3977 * * * * * 2656 * * 2336 * * 3808 2202 1781 * * * 25 0 * * * * * * 2908 0 0 D 26 * * 0 * * * * * * * * * * * * * * * * * 26 0 * * * * * * 2908 0 0 G 27 * * * 3473 * 136 * * * * * * * * * * * * * * 27 0 * * * * * * 2908 0 0 L 28 * * * * * * * * 3290 1472 3808 3320 * * 1451 * * * * * 28 0 * * * * * * 2908 0 0 F 29 * * * * 853 * * * * 2689 * * * * * * * * * 1779 29 0 * * * * * * 2908 0 0 Y 30 * * * * * * * * * * * * * * * * * * * 0 30 0 * * * * * * 2908 0 0 L 31 * * * * * * * * * 231 * * 2759 * * * * * * * 31 0 * * * * * * 2908 0 0 G 32 3320 * * * * 152 * * * * * * * * * * * * * * 32 0 * * * * * * 2908 0 0 T 33 * * * * 3473 * * * 3238 * * 3096 * * * 3996 679 * * * 33 0 * * * * * * 2908 0 0 I 34 * * * * * * * 825 * * * * * * * * * 1199 * * 34 366 * 2157 * * * * 2908 0 0 K 35 3093 3699 * * * * 3827 4162 1614 * * * * * 3507 * * 1917 * * 35 0 * * * * * 0 2581 0 1547 K 36 * * * 2750 * 4162 * * 734 * * * * * 2365 * * * * * 36 0 * * * * 0 * 2581 0 1547 I 37 * * * * * * * 2241 * 3473 * * * * * * * 518 * * 37 0 * * * * * * 2908 0 0 N 38 3308 * 1436 * * 3977 * * 2759 * * 3034 * * 3473 3238 * * * * 38 0 * * * * * * 2908 0 0 I 39 * * 2619 4333 * 2381 * 3273 2449 4193 * * 4098 4063 * 4440 * * * 3473 39 160 * 3250 * * * * 2908 0 0 L 40 2273 * * * 3798 3952 * * 2145 4061 * * 3931 * 3715 3159 3945 4265 * * 40 0 * * * * 0 * 2763 0 1000 K 41 * * 3793 2834 * * * * 2742 4249 * * 3979 3935 2100 4043 2618 * * * 41 0 * * * * * * 2912 0 0 Q 42 * * 3011 2533 * 2215 3935 * * * * * * 1951 3793 3449 * * * * 42 0 * * * * * * 2912 0 0 S 43 * 4389 * * * * * * 2177 * * * * 2145 3182 1540 * 4293 * * 43 0 * * * * * * 2912 0 0 C 44 * 274 * * 3979 * * * * * * * * * * * * * * 3193 44 0 * * * * * * 2912 0 0 F 45 * * * * 3154 * * * * 599 * * * * * * * 3192 * 3083 45 0 * * * * * * 2912 0 0 I 46 * * * * * * * 2130 * * * * * * * * * 374 * * 46 0 * * * * * * 2912 0 0 I 47 * * * 3793 * * * 4269 2228 4249 3192 * * 3103 1868 * 3180 * * * 47 0 * * * * * * 2912 0 0 F 48 * * * * 167 * * * * * * * * * * * * * * 3192 48 0 * * * * * * 2912 0 0 E 49 * * 2533 1149 3192 2745 * * * * 3961 4227 * * * * * * * * 49 0 * * * * * * 2912 0 0 D 50 * * 0 * * * * * * * * * * * * * * * * * 50 0 * * * * * * 2912 0 0 S 51 3793 * 4293 * * 3192 * * 2494 * * 1235 * 3143 * 4269 * * * * 51 0 * * * * * * 2912 0 0 S 52 * * * * * * * * * * 3192 * * * * 681 1906 * * * 52 0 * * * * * * 2912 0 0 K 53 * * 4036 1775 * * * * 1794 * * * * 3928 * 2989 * 2583 * * 53 0 * * * * * * 2807 0 0 S 54 3641 3860 * * 1522 * * * 3251 * * * * 2335 * 2879 * * * 3975 54 0 * * * * * * 2668 0 0 W 55 * * * * * * * * * 3775 * * * * * * * * 109 * 55 0 * * * * * * 2668 0 0 V 56 3244 * * * * * * * * * * * * * * 2222 * 556 * * 56 0 * * * * * * 2363 0 0 L 57 * * * * 2701 * * * * 1219 3369 * * 3244 * 2222 * * * * 57 0 * * * * * * 2363 0 0 W 58 * * * * 1735 * * * * 2701 * * * * 3564 * * 3105 1535 * 58 0 * * * * * * 2363 0 0 K 59 * * * * * * * * 0 * * * * * * * * * * * 59 0 * * * * * * 2363 0 0 D 60 * * 454 3105 * * * * * * * 2701 * * * * * * * * 60 0 * * * * * * 2363 0 0 I 61 * * * * * * * 1219 * 1644 3369 * * * * * * 2701 * * 61 0 * * * * * * 2363 0 0 Q 62 * * * * * * 2657 * * * * * * 560 * 2616 * * * * 62 0 * * * * * * 1802 0 0 T 63 * * * * * * * * * * * * 1606 * * 1606 1545 * * * 63 0 * * * * * * 1504 0 0 G 64 1606 * * * 1606 1545 * * * * * * * * * * * * * * 64 0 * * * * * * 1504 0 0 A 65 0 * * * * * * * * * * * * * * * * * * * 65 0 * * * * * * 1504 0 0 T 66 * * * * * * * * * * * * * * * * 0 * * * 66 0 * * 0 * * * 1000 0 0 //