HHsearch 1.5 NAME c2eqbC_ FAM FILE c2eqbC_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2eqbC_.a3m DATE Fri Mar 12 20:31:47 2010 LENG 93 match states, 93 columns in multiple alignment FILT 69 out of 73 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.4566 -0.5218 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC >sa_dssp EEEEDEEDDEEDEDEDEDDDDEDDEDDEDDEEEEDEEECEEDEEDDEEEDDDEEEDDDEEEDDEDEEDEDEEEDEDEDDEDEDEDDDEEEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 949999999999999999999999999999999999999999999999999999999999999999999999999999999999999963149 >Consensus sxxexlrxxxxqlxxelsxxxxExxxlxxxlxxexxxrxxaExxxxxlexElEeLTAsLFeEANxMVaxarxxxxxxExrxxxLxexlxekdt >c2eqbC_ SNYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLREKDT >UniRef50_Q4RS47(105-192:449) Chromosome 13 SCAF15000, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RS47_TETNG E=1e-12 s/c=0.84 id=31% cov=84% ------RSSLETREKEIREKGSEILREQLDAAkkelkLKDKECERLSQVRNQLEQELEELTASLFEEAHKMVREANVKRAAAEK---QLKE------- >UniRef50_B5H284(529-629:1138) Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H284_STRCL E=2e-06 s/c=0.53 id=29% cov=86% ---EVLRGEHAQLEQERSALQEEVVHLKEALVVAQAERAVAEDRCHRLEQQLDDLAAtadgqdgqagpgeplsitALLDEADRRsVADLVRAVGDLEQRT R----------- >UniRef50_O13930(57-152:527) Rab guanine nucleotide exchange factor sec2 n=1 Tax=Schizosaccharomyces pombe RepID=SEC2_SCHPO E=7e-16 s/c=0.88 id=37% cov=98% ---EALSERIRELEAKLSAKKSfdeelvKFHNLEEKLQLTETKCRNAESEKSRVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLKKQLVDAET >UniRef50_A8PT02(222-301:921) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PT02_MALGO E=6e-15 s/c=1.02 id=35% cov=84% ---------------EKSHVTSEMQRMMERVVDETAQRGKAENDRTRIEAELEELSASLFNEANKMVAVERLQRTRVEERSRELEATLHDTE- >UniRef50_B2ABK2(150-259:735) Predicted CDS Pa_1_21120 n=8 Tax=Sordariomycetes RepID=B2ABK2_PODAN E=6e-14 s/c=0.71 id=31% cov=97% ---EKAREQVRQLEVQVAEqremlagdvwvrrktVEAEKSHLLARVAEEKRARADVEQQKKKIEQELENLTAALFEEANKMVisakEEARREQEVLQRKN DQLKSQLADTE- >UniRef50_Q6C068(49-143:661) YALI0F27379p n=1 Tax=Yarrowia lipolytica RepID=Q6C068_YARLI E=3e-12 s/c=0.77 id=34% cov=95% -----LSTRLLQAMETQSELEEELGREKRDKDRANVENKELKTEVQNLREEMQELSAELFDEANNMVSDARRdaakEVAETKKRNDQLKVQLEERD- >UniRef50_Q7S7T9(233-312:376) Predicted protein n=2 Tax=Neurospora crassa RepID=Q7S7T9_NEUCR E=2e-10 s/c=0.83 id=27% cov=87% -----------QHQKEISDLQAALSQEKSLHTETRAKLAKAEAKLTATSREIEELSVTLFSEANEMVASERRARAKLEERVKTLEKRDEQK-- >UniRef50_Q5KK49(64-137:300) Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q5KK49_CRYNE E=2e-08 s/c=0.82 id=27% cov=78% ---------------ELASLRTAYSSALSKLSSLTAELTDLKRTNSAMEAELESLSQALFEEANKMVADERKRRAEMEENLKEVREE------ >UniRef50_B6K2R3(34-105:132) Predicted protein n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K2R3_SCHJY E=0.0007 s/c=0.62 id=37% cov=65% --------------------KIEYAALVQQLNEERARRIEIERTLVQTQKELEDLSVSLFSEANNMVAKVKKENQILKQ-------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 2096 0 0 N 2 * * * 2303 * * * * * * * 1362 * * * * 1293 * * * 2 0 * * * * * * 2293 0 0 Y 3 * * * * 3083 * * * * 2886 * * * 2961 * * * 2871 * 1054 3 0 * * * * * * 2599 0 0 N 4 * * * 440 * * * * * * * 3051 * 2812 * * * * * * 4 0 * * * * * * 3444 0 0 Q 5 3626 * 2454 * * * * * 1846 * * 4016 * 3119 * 2952 4194 3357 * * 5 0 * * * * * * 3517 0 0 L 6 2519 * * * * * * 4235 * 769 * * * 4326 * * * 4074 * 3714 6 0 * * * * * * 3660 0 0 K 7 4582 * * 3717 * * * * 1602 * * 4723 * * 1329 3096 * * * * 7 0 * * * * * * 4151 0 0 E 8 4633 * * 2383 4803 2935 * * 3102 * * 4582 * 2690 4272 3575 3964 3499 * * 8 0 * * * * * * 4151 0 0 D 9 * * 3614 1766 * 4746 * * 2401 * * 4665 * 3598 3112 3024 4754 * * * 9 0 * * * * * * 4130 0 0 Y 10 4686 * * * 3137 * 3548 3512 * 1805 * 3995 * * 4592 * * 4479 4185 2441 10 0 * * * * * * 4118 0 0 N 11 2356 * 1943 2737 * * * 4926 5106 4108 * 4060 * 4787 3571 3405 * * * * 11 0 * * * * * * 4177 0 0 T 12 4091 * * 2510 * * * * 4915 * * * * 1214 2376 * 3201 * * * 12 59 4637 * 0 * * * 4257 1000 0 L 13 3560 * * * * * 4160 * 3521 715 * 4032 * * 4002 * * 4657 * * 13 48 4929 * 1585 585 * * 4263 1000 0 K 14 * * 3486 1449 * * * * 2306 3533 4274 * * 3084 4039 5299 * * * * 14 29 5657 * 1585 585 * * 4235 1000 0 R 15 4255 * 4526 2311 * * * 4732 1930 * * * * 2123 4440 4098 4984 4756 * * 15 39 5244 * 1585 585 * * 4292 1000 0 E 16 4985 * * 1044 * 5591 * * 2733 * * 4132 * 4230 3338 4862 3864 * * * 16 0 * * * * * * 4445 0 0 L 17 * * * 5272 3473 * * 3683 2995 1110 * * * 3981 3851 * * 4080 * 5278 17 0 * * * * * * 4487 0 0 S 18 2233 * * 5108 * * 5818 * 3364 * * 3155 * 3774 4197 1309 * * * * 18 0 * * * * * * 4530 0 0 D 19 3445 * 2640 2822 * 5078 3428 * 2547 3937 * 5383 * * 4387 3362 5534 4138 * * 19 27 5732 * 3907 100 * * 4533 1000 0 R 20 3034 * * 5433 5982 6047 * 4587 3185 1537 * * * * 4222 * 4379 2146 * * 20 22 6047 * 2000 415 * * 4526 1000 0 D 21 * * 3065 2275 * 4202 6287 * 2480 4728 * 5912 4821 2593 4268 5418 3723 5573 * * 21 0 * * * * * * 4538 0 0 D 22 2990 * 3034 2276 * 5601 * 5031 6250 5517 * 5537 4111 3329 6093 2821 3541 5504 * 5928 22 61 4597 * 2585 263 * * 4564 1608 0 E 23 4436 * * 575 * * * * 3027 5123 * 5485 * 3806 * * 4740 * * * 23 24 5941 * 0 * * * 4510 1000 0 V 24 5525 * * * 4887 * * 3581 3496 1571 3376 5749 * 5135 * * * 3010 6132 2700 24 20 * 6171 * * * * 4528 0 0 K 25 3214 * 4195 2713 * 5025 5897 4959 2674 4149 5744 3525 * 3609 4229 4151 5319 3832 * * 25 0 * * * * * 0 4512 0 1000 R 26 3981 * 4709 4495 * * 3923 * 2136 3326 * 5897 5922 3088 2117 4453 4889 * * * 26 0 * * * * 0 * 4512 0 1000 L 27 3312 * 5968 4110 * * * 5117 3930 738 4970 * * 5859 6402 * 4891 * * 4771 27 0 * * * * * * 4352 0 0 R 28 5691 * 3976 4309 * 5859 5834 * 2296 3444 3871 4293 * 2393 3660 5672 4207 4709 * 4818 28 0 * * * * * * 4352 0 0 E 29 2730 5577 3078 1641 * 4888 * 5922 4623 6286 5865 4552 * 4196 5176 3267 5228 6272 * * 29 0 * * * * * * 4344 0 0 D 30 2207 * 2642 1834 * 5754 * 5920 2966 6137 * * * 3849 4615 * 4748 5787 * * 30 0 * * * * * * 4344 0 0 I 31 4078 4915 * * 4228 * 5167 5368 5176 584 * * * * * 6059 * 3850 * 5429 31 0 * * * * * * 4344 0 0 A 32 3065 * 4122 2649 * 6385 6323 6128 3083 5102 * 5022 * 2797 4982 4101 3203 3256 * * 32 19 6286 * 2322 322 * * 4344 1000 0 K 33 4526 * 4055 1868 * * 6323 * 2885 3695 * * * * 1996 4281 5391 3806 * * 33 0 * * * * * * 4344 0 0 E 34 2566 * 6212 1170 * * * 6077 3180 3436 6197 * * 4001 5860 * 4001 * * * 34 0 * * * * * * 4344 0 0 N 35 4835 * 3606 3849 5922 * 4587 * 3194 6368 * 3572 * 2373 2267 4019 4103 5102 * * 35 20 6212 * 2000 415 * * 4344 1000 0 E 36 1761 * 5391 2255 * 4640 6323 6077 3200 * 6253 4582 * 5548 3838 3980 5068 4159 * * 36 32 * 5508 * * * * 4344 0 0 L 37 3534 * * 2334 * 6102 * 4133 2681 2255 * * * 2645 3581 6087 * 5621 * * 37 0 * * * * * 0 4333 0 1000 R 38 * 3201 * * * * * * 3007 4020 5378 5164 * * 737 * * 4228 * * 38 29 * 5660 * * * 0 4333 0 1000 T 39 2185 * * 2566 * 3530 * 5540 3081 3376 5959 6039 * 3803 3185 * 3977 6352 * * 39 0 * * * * * 0 4327 0 1696 K 40 2758 * 3524 2393 * * * 5959 3241 3989 * 4406 * 3661 5008 3860 3653 3568 * * 40 0 * * * * 1166 851 4327 0 1696 A 41 813 * * * * * 5090 4088 5230 2512 * * * * * * * 2828 * * 41 0 * * * * * 0 4338 0 1239 E 42 * * 4600 383 * * * 6258 4393 * * * * 5912 * 3892 5834 5058 * * 42 0 * * * * * 0 4338 0 1239 E 43 3034 * 3909 3861 * 4741 * * 2744 5890 * 5926 * 2989 3132 2114 4274 * * * 43 33 * 5480 * * * 0 4338 0 1239 E 44 3462 * 4357 1673 * * * 4820 3408 * * 6085 * 3376 2612 * 4556 3834 * 5062 44 0 * * * * * 0 4327 0 1405 A 45 4873 3615 * 6198 * * * 4704 2167 2466 * 3316 * * 2243 * * 3096 * * 45 0 * * * * 985 1015 4368 0 1405 D 46 3058 * 3005 2520 * * 4280 * 3331 6281 * 3888 * 4793 6063 3040 2838 4747 * * 46 0 * * * * * 0 4377 0 1203 K 47 3059 * 5035 3180 * 5210 * * 2264 * * 5234 * 2301 2283 4959 4762 * * * 47 19 6270 * 2807 222 * 0 4377 1000 1203 L 48 3985 * * * * * * 2483 * 1166 3918 * * * * 6103 3310 2937 * * 48 55 6204 5403 2807 222 * 0 4377 1000 1203 N 49 5536 * 3548 1219 * 4434 6667 * 6078 * * 2571 * 4485 4527 3357 4703 * * * 49 0 * * * * * 0 4366 0 1426 K 50 3058 * 6242 4587 * 4580 4184 * 2829 4013 * 4352 * 2331 3309 3102 4448 6091 * * 50 0 * * * * 1008 992 4366 0 1426 E 51 * * 4846 130 * * * * * * * * * 4278 * * * * * * 51 0 * * * * * 0 4378 0 1213 V 52 * 5322 * * * * * 3097 * 904 4177 * * * * * * 1898 * * 52 0 * * * * * 0 4378 0 1213 E 53 6021 * 2759 387 * * * * * * 5322 * * 5232 * * 5597 * * * 53 0 * * * * * 0 4378 0 1213 D 54 6029 * 1323 1184 * * * * * * * 3806 * * * 4026 6410 * * * 54 0 * * * * * 0 4378 0 1213 L 55 * * * * * * * * * 0 * * * * * * * * * * 55 0 * * * * 0 * 4378 0 1213 T 56 4282 * * * * * * * * * * 5350 * * * 1831 637 * * * 56 0 * * * * * * 4385 0 0 A 57 501 * * * * 5560 * * * * * * * 4047 * 5265 3300 3570 * * 57 76 4282 * 4170 82 * * 4385 1000 0 S 58 2158 * * 4530 * * * * 5771 * * 5954 * 3576 * 841 4160 * * * 58 0 * * * * * * 4385 0 0 L 59 * * * * * * * * * 73 * * * * * * * 4338 * * 59 0 * * * * * * 4385 0 0 F 60 * * * * 76 * * * * 4282 * * * * * * * * * * 60 0 * * * * * * 4385 0 0 D 61 * 6688 1869 1276 * 5802 * * * * 5889 3777 * 3771 * 3210 6120 * * * 61 0 * * * * * * 4385 0 0 E 62 * * * 296 * * * * * * * * * 2570 5889 * * * * * 62 0 * * * * * * 4385 0 0 A 63 0 * * * * * * * * * * * * * * * * * * * 63 0 * * * * * * 4385 0 0 N 64 * * 4282 * * * 2712 * * * * 329 * * * * * * * * 64 0 * * * * * * 4385 0 0 N 65 6301 * * 2225 * * * * 1657 * * 2504 * 6125 3268 4882 3143 6075 * * 65 0 * * * * * * 4385 0 0 M 66 * * * * * * * * * * 113 * * * 3736 * * * * * 66 76 4282 * 0 * * * 4385 1000 0 V 67 * * * * * * * * * * * * * * * * * 0 * * 67 65 4510 * 2000 415 * * 4385 1418 0 A 68 1032 * * 4510 5878 * 4384 5995 6462 6177 * * * 5637 3658 2024 * * * 5947 68 0 * * * * * * 4385 0 0 D 69 4042 * 1924 2146 * * * * 3909 * * 3105 * 3788 * 5305 3170 4100 * * 69 0 * * * * * * 4385 0 0 A 70 663 * * 1755 * * * * * 4282 * * * * * * * 5593 * * 70 36 5350 * 0 * * * 4385 1000 0 R 71 5404 * * * * * * * 3080 * * 2835 * 5103 903 3285 * 4282 * * 71 23 5995 * 2000 415 * * 4385 1000 0 K 72 * * * 3905 5802 * * 4099 1789 3703 3858 * * * 1438 5878 6548 5308 * * 72 39 5243 * 2000 415 * * 4385 1000 0 E 73 1800 * 5803 1302 * 6095 * * 2474 * * * * 5963 5057 4950 5947 * * * 73 0 * * * * * * 4385 0 0 K 74 4605 5560 * * * * 5803 * 4019 5104 * 5593 * 2418 1448 6133 2933 3684 * 4983 74 0 * * * * * * 4385 0 0 Y 75 1223 * 4336 3996 5146 4282 2420 5637 * * * 6128 * 4822 * * 5963 5342 * 3599 75 0 * * * * * * 4385 0 0 A 76 2252 * 3839 3142 * * * 3976 2896 4096 5803 3203 * 4937 3986 5111 4596 4108 * * 76 0 * * * * * * 4385 0 0 I 77 2005 * * * 3963 * * 4018 * 2042 5647 * * * * 3830 3336 2691 * 4714 77 0 * * * * * * 4379 0 0 E 78 * * 4537 574 * * * * 2742 * * 5973 * 3662 5343 * 5960 * * * 78 50 * 4862 * * * * 4379 0 0 I 79 5719 * 5567 2338 * * 5536 2943 1609 6058 * * * 3014 3658 * * 3951 * * 79 56 * 4711 * * * 0 4376 0 1531 L 80 5273 * * 5420 * * 5698 * 1546 5134 * 5292 * 4590 1019 * * * * * 80 0 * * * * * 0 4307 0 1911 N 81 4369 * * * * * * 5861 4971 3504 * 1154 * * * 3255 4230 2272 * * 81 0 * * * * 945 1057 4237 0 1911 K 82 3742 * 3088 1989 * 6325 4585 * 3047 * * 5735 * 5603 1948 3607 * * * * 82 0 * * * * 0 * 4266 0 1455 R 83 * * 5280 2546 * * * 5887 2132 4813 * 5603 * 1875 3383 5291 4434 4019 * * 83 0 * * * * * * 4237 0 0 L 84 5280 * * * * * * 4956 * 243 5603 * * * * * 4384 5140 * * 84 0 * * * * * * 4237 0 0 T 85 5914 * * 1770 * * * * 2022 * * 4906 * 2302 3613 * 6107 3936 * 4436 85 0 * * * * * * 4141 0 0 E 86 2896 * * 1047 * * * * 3457 5356 * * * 5651 2709 4092 * 4842 * * 86 0 * * * * * * 4141 0 0 Q 87 3223 * * 2439 * * * * 5740 * 5478 5219 * 1553 2399 * 3476 5634 * * 87 0 * * * * * * 4063 0 0 L 88 * * 2678 4839 * * * 3048 * 744 * * * * 3811 * * 5670 * * 88 0 * * * * * * 3998 0 0 R 89 3758 * 4787 2748 * 2776 3817 * 1945 * * 4851 * 3564 3514 * * 4116 * * 89 0 * * * * * * 3960 0 0 E 90 * * 1658 843 * * * * 4088 * * * * 3903 * * * * * * 90 0 * * * * * * 3937 0 0 K 91 3397 * * * * * * 5012 804 4806 * 5598 * * 3898 * 2746 5111 * * 91 0 * * * * * * 3928 0 0 D 92 * * 1266 1297 * * * * * * * 3404 * 4773 4430 * * * * * 92 0 * * * * * * 3918 0 0 T 93 * * * * * * * * * * * * * * * * 0 * * * 93 0 * * 0 * * * 3006 0 0 //