HHsearch 1.5 NAME c2epuA_ FAM FILE c2epuA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2epuA_.a3m DATE Thu Mar 11 19:00:24 2010 LENG 45 match states, 45 columns in multiple alignment FILT 110 out of 12421 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.5063 2.1072 SEQ >ss_dssp CCCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC >sa_dssp EEEEEEEEEECECDAEEEDECCEDDDEADEBCEEDEEEEEDEEEE >ss_pred CCCCCCCCCCCCEECCCCCCEECCHHHCCEEEEECCCCCCCCCCC >ss_conf 964312368984572713275613444330231017872634583 >Consensus GxHxxxHtxekpxxCxxCxkxFxxxxxlxxHxrxHxxekpxxCsg >c2epuA_ GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG >UniRef50_UPI0000D57431(494-537:873) PREDICTED: similar to zinc finger protein 99 n=1 Tax=Tribolium castaneum RepID=UPI0000D57431 E=7e-05 s/c=1.10 id=27% cov=98% -RHQLVHSDERPHRCSQCNSAFKTRANLIHHTRtVHSGQRSHWCS- >UniRef50_C3ZKI3(150-194:958) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZKI3_BRAFL E=8e-05 s/c=1.07 id=28% cov=102% GRHVKTHTGERLFACEECEYRSNQKYALQRHMKTHACEKPSITCG >UniRef50_Q59SQ8(378-421:520) Potential zinc finger protein n=3 Tax=Candida albicans RepID=Q59SQ8_CANAL E=5e-07 s/c=1.26 id=27% cov=100% -SHMKTHSNEKPYHCNICFKRFARSHDKKRHELLHQGVKNFKCQG >UniRef50_B0W530(976-1018:1039) Zinc finger protein n=1 Tax=Culex quinquefasciatus RepID=B0W530_CULQU E=0.0002 s/c=1.09 id=30% cov=98% -HENQKHLGKLPFACQLCPEKFVRERDLRLHERKHTGLRLYPCA- >UniRef50_Q1RLG1(9-51:939) Zinc finger protein (Fragment) n=2 Tax=Ciona intestinalis RepID=Q1RLG1_CIOIN E=0.0007 s/c=1.05 id=25% cov=98% GVHTTTNN-RKMYWCRLCNYASFEKSTIMRHQRTHTGLRPYSCT- >UniRef50_UPI0000F2E4A1(777-819:898) PREDICTED: similar to hCG2041454 n=1 Tax=Monodelphis domestica RepID=UPI0000F2E4A1 E=7e-05 s/c=1.13 id=27% cov=98% -RHINNHCRKKFFQCPDCKKSFAHKSSLRAHHHVHKKDRPFLCS- >UniRef50_Q8IP13(571-617:826) CG31782, isoform B n=6 Tax=melanogaster subgroup RepID=Q8IP13_DROME E=2e-05 s/c=1.07 id=27% cov=100% GLHMREHEGEVPYKCHICPRVFKYNTALNIHIQSHTDEQPYsfnQCS- >UniRef50_Q6NU43(575-607:737) MGC81262 protein n=3 Tax=Xenopus RepID=Q6NU43_XENLA E=8e-05 s/c=1.46 id=30% cov=67% ------HTCDKPYRCSLCGYVCSHPPSLKSHMWKH---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4893 0 0 S 2 4388 * 5847 5227 * * 2134 6093 6043 5130 * * * 6008 1616 2889 2991 5678 * * 2 0 * * * * * * 6198 0 0 S 3 5569 * 6936 5035 * * 433 5582 6857 4675 6545 6118 4882 5152 6575 5577 6358 * * * 3 0 * * * * * * 6386 0 0 G 4 4156 * * 3900 * 4400 7108 4552 4344 2763 2937 6540 6734 2060 3625 4898 4147 5535 * * 4 0 * * * * * * 6403 0 0 S 5 3706 * 4922 5100 * * * * 2174 3627 6016 3733 5420 5747 1917 4439 4074 4457 * 6600 5 0 * * * * * * 6415 0 0 S 6 4745 * 6762 6817 5055 4454 * 3145 3703 4626 4855 5889 4503 5040 4750 2638 2135 3520 * * 6 0 * * * * * * 6443 0 0 G 7 6518 * 6520 6635 * 6586 256 * * * * 5313 5253 5829 6533 5407 6886 * * 6883 7 0 * * * * * * 6576 0 0 T 8 4274 5350 6448 5179 6752 5442 * 5315 5427 4196 5197 3678 4671 5297 6475 2329 1544 5843 * 6809 8 16 * 6546 * * * * 6576 0 0 G 9 4070 * 3894 3196 5717 1212 * 6624 3765 * * 4217 6896 5697 4358 4265 5311 6444 6536 * 9 11 7002 * 2000 415 0 * 6559 1000 1000 Q 10 * 6631 3544 1115 6659 6998 * 5183 3013 5180 6009 6246 6904 4124 4999 5527 5361 3756 * * 10 29 5646 * 576 1602 * * 6610 1561 0 K 11 5870 * 6866 6726 5982 6798 * 6846 1040 5679 * 4583 5892 4842 1862 6608 6427 5732 6962 6924 11 12 * 6947 * * * * 6611 0 0 P 12 5072 * 5771 4910 * * 6846 5823 4381 3477 6551 5055 991 6619 4713 3750 4149 6087 * 5896 12 10 7199 * 0 * 0 * 6610 1000 1000 F 13 * 6654 * * 1498 * 2735 * 6608 5777 * * 5824 6659 * 6358 * * 6365 1302 13 0 * * * * * * 6611 0 0 E 14 3782 5480 6649 2999 * 4957 5895 5108 1911 6257 4985 6549 4419 4213 3607 6057 4008 3320 6557 * 14 0 * * * * * * 6611 0 0 C 15 * 137 * * * 5743 * * * * * * * * 6170 4516 * * * 6114 15 11 7006 * 1000 1000 * * 6611 1000 0 T 16 4881 * 2522 3148 * 4493 4759 6553 3019 * * 4020 3211 3637 5351 3226 3799 6566 * * 16 0 * * * * * * 6611 0 0 H 17 * * 4141 2390 4366 5743 3783 3045 4000 3164 6660 4582 * 3794 6703 6646 5556 3500 * 3953 17 31 5548 * 1000 1000 * * 6611 2145 0 C 18 * 127 * * 5642 * * * * * * * * * * 4988 * * * 4941 18 0 * * * * * * 6611 0 0 G 19 5777 * 3508 4856 7053 1447 5370 6594 4616 6008 * 4134 3454 4805 5364 3382 4100 6893 5435 * 19 0 * * * * * * 6611 0 0 K 20 4714 * * 4199 4935 * 6766 * 1036 * 5252 5837 * 4063 2872 5226 6427 5557 5782 4061 20 0 * * * * * * 6611 0 0 S 21 3091 6027 5178 5439 * 3801 * 4453 3706 5301 5891 5750 * 5220 2853 2317 2560 5245 * * 21 0 * * * * * * 6611 0 0 F 22 6325 4718 * * 396 * * * * 4491 * * * * * 4753 5015 6353 * 3941 22 0 * * * * * * 6611 0 0 R 23 3457 * 5767 * 4008 6863 6991 5348 2824 4145 5190 4351 4116 6866 3079 2770 3531 4037 * 4853 23 0 * * * * * * 6611 0 0 A 24 4586 * 3909 4390 7067 6187 3797 6997 5368 4782 6553 4691 5642 2887 2864 3470 3239 5750 3966 4015 24 0 * * * * * * 6611 0 0 K 25 4186 * 6837 3963 5069 * 6639 * 1902 3531 5507 4949 5137 3799 2563 2940 * 5372 * * 25 0 * * * * * * 6611 0 0 G 26 4073 4466 3965 4434 5141 3266 4019 6248 3949 5778 * 5881 5659 6058 6802 1767 4410 5490 6899 3993 26 0 * * * * * * 6611 0 0 N 27 4019 * 3237 4301 5642 6060 2949 5613 5508 4600 * 2646 * 3690 4127 3051 4116 5268 * 4855 27 0 * * * * * * 6611 0 0 L 28 * 5646 * * 2960 * 5743 4975 5895 672 4870 * 6114 * 5188 * * 5189 5476 5020 28 0 * * * * * * 6611 0 0 V 29 6001 * * 4110 5584 6723 7053 3646 2634 5112 4738 3242 6563 3769 3146 3457 3667 3419 * 6027 29 0 * * * * * * 6611 0 0 T 30 4283 * 6094 4199 6730 6325 5957 4472 2903 3366 6897 3909 * 3515 2016 3792 4421 4749 * * 30 0 * * * * * * 6611 0 0 H 31 * * * * * * 91 * * 6661 * * * 6172 5642 * * * * 5824 31 28 5712 * 0 * * * 6611 1543 0 Q 32 6549 * * 3286 * * 6778 4195 3901 2929 2628 * 6563 2318 3349 4885 4791 3994 * 5568 32 24 5894 * 0 * * * 6611 1606 0 R 33 5883 7083 * 6157 5899 * 6902 3741 2280 4122 6639 4695 6863 4435 1409 5007 5136 4375 * 6566 33 30 5620 * 0 * * * 6611 2089 0 I 34 5977 7223 * * 5767 5462 5063 2459 4095 4262 4014 6798 * * 3644 3557 2030 3024 6598 * 34 44 5049 * 0 * * * 6611 2180 0 H 35 * 5467 6353 * * * 144 * * * * 5743 * 6686 5806 * * * * 6187 35 10 7109 * 1000 1000 * * 6611 1000 0 T 36 3728 6427 4972 4597 6730 4680 6935 5841 5924 5664 4759 3365 * 4765 5764 2646 1548 4696 * * 36 25 6998 6790 0 * * * 6611 1000 0 G 37 4184 6468 4916 3349 * 1407 6699 * 3948 5769 6826 3171 5816 5655 4004 4949 5032 4566 * 7000 37 37 5285 * 980 1020 0 * 6596 1570 1000 E 38 4338 * 3633 1098 * 5020 * 6647 4334 4330 * 4391 6068 3669 5164 5606 4832 4720 * * 38 26 5796 * 1822 479 * * 6610 1602 0 K 39 * * 5891 5014 5612 5818 * 6822 1027 4653 * 4655 5756 5829 2014 6362 5585 * * 5770 39 10 7160 * 1000 1000 * * 6610 1000 0 S 40 4573 5229 7021 * 7059 6749 5021 6691 4649 4393 6330 5376 796 * 4005 4614 4417 7160 * 6714 40 0 * * * * * * 6610 0 0 G 41 6849 4519 * * 1733 5552 2884 * 6335 5329 * * 6342 6474 * 4454 * 6344 * 1429 41 13 6752 * 1585 585 * * 6608 1000 0 P 42 3990 * 6935 3213 * 5892 4836 5567 2253 5053 6058 6834 2857 3369 4066 3539 4898 3993 7061 * 42 0 * * * * * * 6573 0 0 S 43 * 145 * * * 6311 * 6150 6320 6505 * * * 5473 * 6559 6336 * * * 43 0 * * * * * * 6560 0 0 S 44 3494 3999 5319 * * 4241 * * 5423 * * 4560 * 4688 * 1346 1874 * * * 44 0 * * * * * * 5957 0 0 G 45 * * * * * 0 * * * * * * * * * * * * * * 45 0 * * 0 * * * 4041 0 0 //