HHsearch 1.5 NAME c2eprA_ FAM FILE c2eprA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2eprA_.a3m DATE Wed Mar 10 00:02:17 2010 LENG 48 match states, 48 columns in multiple alignment FILT 106 out of 11287 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.9 EVD 0.5100 2.3042 SEQ >ss_dssp CCCCSCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC >sa_dssp EEEEEEEEEEEDCDBEEDEEECEEEEDBDECDEECDEEEEEEEDEEEE >ss_pred CCCCCCCCCCCCEECCCCCCEECCHHHCEECCEECCCCCCCCCCCCCC >ss_conf 987877671076777857886556877748147336586760488889 >Consensus GssxxxxxxxkxxxCxxCxkxFxxxxxLxxHxrxHtgekPyxCxxcsx >c2eprA_ GSSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG >UniRef50_UPI00017B47DE(1070-1117:1544) UPI00017B47DE related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B47DE E=3e-07 s/c=1.17 id=27% cov=92% GKKNAYSNSVQKMTCPYCPRVFPWASSLQRHMLTHTGQKPFPC----- >UniRef50_Q6NZS5(445-490:588) Zgc:76872 n=1 Tax=Danio rerio RepID=Q6NZS5_DANRE E=2e-05 s/c=1.09 id=30% cov=92% GPSFTPTGSETSFDCSHCGKSLRSRKNYSKHMFIHSGQKPHQC----- >UniRef50_B0WUT3(442-483:627) Zinc finger protein 479 n=1 Tax=Culex quinquefasciatus RepID=B0WUT3_CULQU E=0.0002 s/c=1.11 id=29% cov=73% ---------KKMHACELCSMRFTTSGAKAAHLRIHKKERPFVC----- >UniRef50_A5E1B3(330-372:845) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E1B3_LODEL E=3e-05 s/c=1.16 id=30% cov=92% GAKSINGDKGETYPCQHCNAVFTVKGYLTRHMKKHSSEKAYKC----- >UniRef50_C4Q1B8(221-263:673) Zinc finger protein, putative n=1 Tax=Schistosoma mansoni RepID=C4Q1B8_SCHMA E=0.0004 s/c=1.07 id=24% cov=71% ----------KPFVCDVCNKRFAQKANMKTHRNRHIhRDKIFRC----- >UniRef50_UPI0000F20366(203-248:909) PREDICTED: wu:fe05a04 n=1 Tax=Danio rerio RepID=UPI0000F20366 E=0.0006 s/c=0.98 id=26% cov=98% -SESNENGENKDNLCHVCDLTFSSLFLLREHLNMHTGVRPYRCDECS- >UniRef50_UPI00006A18CE(400-451:980) Zinc finger protein 628. n=2 Tax=Euteleostomi RepID=UPI00006A18CE E=2e-11 s/c=1.36 id=27% cov=94% GTSGlryhmRDHTGERPYKCSECGKAFKRSSLLSIHQRVHTGVRAFKCA---- >UniRef50_UPI000186DE01(387-429:492) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186DE01 E=7e-05 s/c=1.12 id=30% cov=77% -------RDDRYFCCDICIFKTVQLKKLIQHRRMHTGEKPHLC----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4896 0 0 S 2 2250 * 5453 * * 4551 3681 * 5342 * * 4467 5266 * 5433 1336 3139 * * 5823 2 0 * * * * * * 5782 0 0 S 3 3341 6036 5195 3745 * 5216 4378 * 4283 * * 3916 5065 5865 4980 1335 3433 5383 * * 3 0 * * * * * * 6072 0 0 G 4 3468 5098 6227 4080 5908 1678 6463 * 3000 * * 4968 5185 3919 5022 3082 3877 * * * 4 13 6788 * 2322 322 * * 6078 1000 0 S 5 3981 5972 3661 3342 5881 6025 4289 5325 4607 6297 * 3606 4401 4673 4083 1980 4165 5162 5966 * 5 0 * * * * * * 6119 0 0 S 6 3799 6247 2724 3064 * 4739 5212 5596 4651 6950 * 4599 3888 5109 5483 1929 4175 5625 * 6296 6 0 * * * * * * 6139 0 0 G 7 4255 * 4714 2925 * 2431 2561 * 3769 5637 * 4615 4327 4324 4333 3480 4765 * * 6288 7 0 * * * * * * 6174 0 0 R 8 5255 * 4429 4173 * 3592 6489 6318 2904 * 4645 3166 4888 5863 2337 3159 3365 6556 6393 * 8 11 6997 * 0 * * * 6218 1000 0 T 9 3595 * 4287 4219 * 3188 6055 5553 2679 6413 * 4068 4010 4430 3369 2907 3561 6009 * * 9 12 * 6941 * * * * 6182 0 0 R 10 6745 * 5361 2602 * 3510 6504 6202 2350 5198 * 4473 3734 2881 3236 4240 5526 5102 * * 10 10 * 7217 * * 0 * 6184 0 1000 K 11 4432 * 5990 5551 * 4230 6566 6220 1003 6651 * * 5649 6645 2197 5340 5055 6673 6759 6864 11 52 4807 * 2053 398 * 0 6160 2579 1000 Q 12 6206 6843 5779 4226 * 6934 * 5128 3132 5119 * 4622 1862 4093 3088 3045 5091 5378 5058 5061 12 23 5955 * 1000 1000 0 * 6160 1603 1000 V 13 * 6736 6105 * 1400 * 2844 * * 4804 6657 4453 6448 * * * * 5085 6524 1668 13 0 * * * * * * 6159 0 0 A 14 3865 4939 6835 3404 * 4909 * 4049 2562 5397 4984 6059 3732 3047 4016 4521 4252 3380 6380 * 14 0 * * * * * * 6159 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 24 5950 * 1000 1000 * * 6159 1582 0 E 16 6698 * 3549 3315 * 3717 3866 * 2991 5665 * 3676 2926 3213 5726 3681 3720 6562 6230 * 16 0 * * * * * * 6159 0 0 I 17 6557 * 4745 3080 3513 7140 3802 2981 4176 4644 4802 5398 * 3474 6632 * 5787 2813 6698 3111 17 8 7417 * 1000 1000 * * 6159 1000 0 C 18 * 45 * * * * * * * * * * * * * * * * * 5021 18 0 * * * * * * 6159 0 0 G 19 5215 * 3467 3690 6827 1229 5241 6469 6783 6962 * 3622 3845 5318 6271 3665 6380 6811 6252 6230 19 0 * * * * * * 6159 0 0 K 20 5860 * * 5102 5516 5449 5758 * 975 4779 5906 5891 * 4598 2511 5172 * * * 3891 20 14 * 6739 * * * * 6159 0 0 I 21 2890 4890 6319 5922 * 4842 5575 4533 4663 3860 6767 * 5566 4271 2607 2713 3631 3114 * * 21 0 * * * * * 0 6149 0 1000 F 22 6777 4944 * * 449 * * 6529 * 4133 6378 * * * * 5068 4473 6681 * 4027 22 0 * * * * * 0 6149 0 1000 R 23 3669 6266 6179 5461 5812 6206 * 5018 2890 5334 * 3910 4333 5077 2838 2739 2567 4812 * 6625 23 0 * * * * 0 * 6149 0 1000 D 24 5909 5112 3815 5649 5793 * 4380 * 4425 6960 6794 * * 2466 2214 2485 3454 5179 5392 5967 24 0 * * * * * * 6159 0 0 V 25 3735 * * 5158 5345 6248 4929 * 1745 4471 * 4098 3214 5364 3297 3023 * 5053 5458 6078 25 0 * * * * * * 6159 0 0 Y 26 4112 4720 4400 4427 4408 3831 5286 5802 3612 5928 * 6322 6562 5343 5215 1557 4664 6168 6783 3747 26 0 * * * * * * 6159 0 0 H 27 5393 * 3424 4931 * 5279 2503 * 4257 5499 6913 2429 6764 4950 4842 2792 3511 5211 6583 4890 27 0 * * * * * * 6159 0 0 L 28 6557 * * * 3774 * 6087 5915 * 417 4475 * * * 4830 * * 5195 6533 5807 28 21 6087 * 0 * * * 6159 1000 0 N 29 3915 * 4306 4347 4959 6953 6617 4436 2293 4143 6599 3855 * 3500 2929 4393 4131 3951 6902 * 29 0 * * * * * * 6159 0 0 R 30 3632 5384 5055 3608 * 6621 4703 3938 3467 3591 5660 5609 * 4759 1871 4377 4267 4460 * * 30 0 * * * * * * 6159 0 0 H 31 * 6180 * * * * 104 * * * * * * 5339 5915 * * 6087 * * 31 11 7032 * 0 * * * 6159 1000 0 K 32 6434 * * 3681 * * 5684 4382 3736 2572 2093 5288 * 2967 3541 5020 5472 4574 * 5021 32 22 6027 * 0 * * * 6159 1647 0 L 33 5910 6448 * 6621 4938 * 6698 5915 3038 2893 6739 4481 6779 6133 1277 4716 5883 3666 6783 6217 33 0 * * * * * * 6159 0 0 S 34 5843 5202 * * * 5544 * 2020 4249 3678 5207 6345 * * 4198 3077 2272 2864 * * 34 0 * * * * * * 6159 0 0 H 35 * * * * * * 123 * * * * 6252 * * 6168 5021 * * * 5389 35 30 6097 7369 1458 653 * * 6159 1525 0 S 36 5088 * 5867 5016 * 5202 * 5714 * 5707 5340 4696 * 6597 4197 2025 1079 6643 * * 36 0 * * * * * 0 6161 0 1000 G 37 5702 * 4135 3601 * 990 * 6273 4919 * * 3790 6676 4998 3683 5538 4197 6102 6622 * 37 12 * 6939 * * 0 * 6165 0 1000 E 38 5109 * 3374 926 6632 4789 6410 5644 5134 4675 6658 6940 * 3878 4820 * 6327 3866 * * 38 34 5425 * 945 1058 0 * 6162 2041 1000 K 39 6786 6244 * * * 5552 * * 1112 6610 5179 4724 * 4596 1636 6236 4590 * * * 39 0 * * * * * * 6166 0 0 P 40 4996 * 5642 6577 * 6620 * * 4862 4062 * 4435 511 * 5530 4455 5741 * * * 40 0 * * * * * * 6166 0 0 Y 41 * 6286 * * 1605 * 2636 6234 * * * 6566 * * 6764 6006 * * 6201 1200 41 0 * * * * * * 6155 0 0 S 42 3760 6983 5909 3490 * 5136 4469 5074 2168 4266 * 5514 4003 4001 4109 3437 3710 4024 * * 42 0 * * * * * * 6155 0 0 S 43 * 30 * * * * * * * * * * * * * 5582 * * * * 43 0 * * * * * * 6147 0 0 G 44 2375 * 2684 4381 * 2075 4677 4702 4273 * * 4653 4571 * * 3132 4602 * * * 44 84 4142 * 0 * * * 4773 1000 0 P 45 * * * 3919 * * * 4029 2491 * 4010 4521 2130 2636 * 4156 3760 * 3840 * 45 0 * * * * * * 4204 0 0 S 46 * 558 * * * 2925 * * * * * * * * * 2960 * * * 4043 46 0 * * * * * * 4113 0 0 S 47 * 2841 3867 * * 3523 * * * * * * * * * 504 * * * * 47 0 * * * * * * 4036 0 0 G 48 * * * * * 0 * * * * * * * * * * * * * * 48 0 * * 0 * * * 2628 0 0 //