HHsearch 1.5 NAME c2epqA_ FAM FILE c2epqA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2epqA_.a3m DATE Fri Mar 12 15:16:06 2010 LENG 45 match states, 45 columns in multiple alignment FILT 100 out of 11616 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.9 EVD 0.4865 1.7181 SEQ >ss_dssp CCCCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC >sa_dssp EEEEDEEECEDCAEEDEEECEEDEECCECCEEDEEEEEEEEEEEE >ss_pred CCCCCCCCCCCEECCCEEEECCCCCCEEEEEEECCCCCCCCCCCC >ss_conf 987888889858643024311466640026630588877856888 >Consensus xsxxhtgekpyxCxxCxkxfxxxsxLxxHxxxHtgexxxxcPxcG >c2epqA_ GSSGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG >UniRef50_UPI0001797CFC(247-287:645) PREDICTED: zinc finger protein 772 n=1 Tax=Equus caballus RepID=UPI0001797CFC E=0.0004 s/c=1.12 id=30% cov=73% -----TGQMDYKCSESGEAFSHKDEFVQHQNIHMGET-------- >UniRef50_UPI00016E2D58(389-426:531) UPI00016E2D58 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E2D58 E=8e-05 s/c=1.27 id=32% cov=49% --------KPHACPQCPKTFLTRTELRVH---------------- >UniRef50_C3YUR1(107-150:164) Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YUR1_BRAFL E=3e-05 s/c=1.13 id=25% cov=80% -SNKHEGKKLFMCNICHKGFNYSESLKEHQVIHGGN--------- >UniRef50_UPI00015B4F31(31-70:1008) PREDICTED: similar to zinc finger protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B4F31 E=3e-06 s/c=1.33 id=30% cov=67% -----TNTRPYPCDFCSKRFRKKANLMNHMVTHQ----------- >UniRef50_Q1LW45(234-274:429) Novel protein (Fragment) n=9 Tax=Danio rerio RepID=Q1LW45_DANRE E=0.0002 s/c=1.14 id=26% cov=60% -------ENTYECSHCNSTFILAGTLKHHKMTH------------ >UniRef50_C4R618(132-176:209) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R618_PICPG E=1e-08 s/c=1.35 id=24% cov=102% SSTPNTAIRKYKCKICERSFTTSGHLARHTRIHTGEKKHECPFEG >UniRef50_Q12041(91-132:191) Transcriptional regulator MET32 n=6 Tax=Saccharomyces cerevisiae RepID=MET32_YEAST E=1e-07 s/c=1.38 id=30% cov=96% ---NSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCG >UniRef50_B4JNQ1(300-344:468) GH24099 n=1 Tax=Drosophila grimshawi RepID=B4JNQ1_DROGR E=7e-05 s/c=1.08 id=30% cov=73% --QGHSGLRQFKCEHenCGKSFVSQHNLTSHRRVHS----------- >UniRef50_UPI0000E4A838(159-201:677) PREDICTED: similar to GA17413-PA n=4 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A838 E=0.0006 s/c=1.06 id=30% cov=67% -------EKPFKCSQCDSGLPRKTSLVSNLRTNSGE--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 2247 * * * * 794 * * * * * * * * * 2235 * * * * 1 0 * * * * * * 2829 0 0 S 2 2443 * * 3402 * * * * * * * 3424 * * * 670 * * * * 2 0 * * * * * * 3916 0 0 S 3 4110 * * * * 4039 4188 * * * * 3082 * * 3956 1305 2063 * * * 3 0 * * * * * * 4561 0 0 G 4 3240 * * * * 1448 4638 * 4446 * 4121 2551 4509 * 4640 3591 4429 * * * 4 0 * * * * * * 4731 0 0 S 5 3954 * * 4534 * * 824 * * * * 2427 * * * 2822 * * * * 5 0 * * * * * * 4843 0 0 S 6 4100 5155 5431 4556 * * * * * * * 4958 5964 * * 1664 1047 * * * 6 0 * * * * * * 6001 0 0 G 7 4751 * 2976 5338 * 670 * * 6309 * * 4158 * 5801 5872 4747 5282 * 5977 * 7 0 * * * * * * 6011 0 0 E 8 5709 * 3890 874 * 6597 5397 5704 3979 * * 5966 4901 4314 6047 * 3805 3949 * * 8 0 * * * * * * 6318 0 0 K 9 * * * 6024 5498 * 5860 * 879 * 5374 3775 * * 1916 6051 5369 * * * 9 0 * * * * * * 6370 0 0 P 10 5553 6499 5382 * * 5520 6423 5782 3507 4758 * 6282 833 5219 4167 4478 4490 6478 * 6678 10 20 6154 * 1783 495 * * 6392 1591 0 Y 11 * 6185 * * 1607 * 3134 * 6089 6062 * 6296 * * * * * 5550 6136 1101 11 0 * * * * * * 6429 0 0 S 12 4282 * 6621 3549 * 4388 5056 5885 1940 5280 4747 6564 4029 3057 5644 4171 4122 3339 6501 * 12 0 * * * * * * 6602 0 0 C 13 * 141 * * 5820 * * * * * * * * * * 5598 * * * 4195 13 10 7199 * 1000 1000 * * 6602 1000 0 P 14 4464 * 2935 3118 6560 4517 4290 * 2782 6929 * 4595 3160 4239 4514 2724 5151 6684 6566 * 14 0 * * * * * * 6602 0 0 V 15 * * 5592 2455 4470 * 2996 3217 4654 3685 5544 6064 6289 3492 * 6903 4739 2911 6044 3849 15 37 5311 * 1000 1000 * * 6602 1752 0 C 16 * 95 * * * 5809 * * * * * * * * * 5711 * * * 5225 16 0 * * * * * * 6602 0 0 G 17 4369 6600 3336 6392 * 1377 4648 * 5181 5598 * 3565 3708 5462 4726 3309 5592 * 6149 * 17 0 * * * * * * 6602 0 0 L 18 5360 * * 4636 5863 * 5579 * 1060 4510 4474 6564 * 5594 3027 4206 5551 * * 3333 18 0 * * * * * * 6602 0 0 R 19 2801 * * 5963 6515 3419 6234 4885 4355 6060 * 4401 6848 3673 2931 3087 2445 4535 * 6064 19 12 6929 * 0 * * * 6602 1000 0 F 20 3856 4548 * * 722 * * * * 3812 * * * * * 5164 4629 5070 * 3148 20 0 * * * * * * 6602 0 0 K 21 3902 5971 6566 * 4955 4038 5633 4311 3082 4781 7291 4361 5220 6639 3165 2431 3256 4050 * 4853 21 0 * * * * * * 6602 0 0 R 22 * 5019 4987 6598 5531 5314 3080 * 3374 4490 6560 3812 * 3195 2258 3394 3950 5966 6044 5040 22 0 * * * * * * 6602 0 0 K 23 4359 6592 * 5328 6676 6850 4817 6999 1712 5403 5073 3651 3719 4253 3733 2726 5546 6304 6799 5769 23 0 * * * * * * 6602 0 0 D 24 3971 5564 3535 4250 4592 4688 4937 * 5943 5739 6080 4967 5741 4914 5151 1498 3853 6598 4911 4838 24 0 * * * * * * 6602 0 0 R 25 3309 6113 3866 3923 6877 5157 2765 5206 3434 4908 * 2579 * * 4863 3226 4401 6793 * 4365 25 0 * * * * * * 6602 0 0 M 26 * 5502 * * 3522 * 6387 5739 5671 617 4031 * 5645 6841 4807 * * 5962 6080 4961 26 0 * * * * * * 6602 0 0 S 27 4377 * 5383 4615 5645 * 6511 4259 2179 5210 6515 3972 * 3873 3374 3632 3039 3638 6600 5395 27 0 * * * * * * 6602 0 0 Y 28 4140 * * 3203 6304 * 6050 4671 2934 4165 4530 5528 6668 3162 2380 3361 4490 4625 * 5644 28 0 * * * * * * 6602 0 0 H 29 * * * * * * 135 * * 5225 * 5674 5502 5594 * * * * * * 29 15 6600 * 0 * * * 6602 1000 0 V 30 * * * 4413 * * * 3017 4107 2234 1835 * * 3010 3603 * 5055 5866 * 5317 30 14 6656 * 0 * * * 6602 1000 0 R 31 5768 * 6391 4834 5887 6546 6301 4268 2899 3240 4718 4981 5979 4797 1557 6587 4398 4838 5036 5807 31 0 * * * * * * 6597 0 0 S 32 4802 5210 6630 * 6744 6819 5223 2684 4808 4696 5115 * * * 4240 3146 1841 2488 * * 32 15 6574 * 0 * * * 6599 1000 0 H 33 * 5640 * 6053 * * 198 * 6083 * * 5654 * * * 6286 * 4930 * 6268 33 0 * * * * * * 6603 0 0 D 34 4185 * 5475 5151 5548 5080 4012 5851 4544 * 4570 3458 * 4792 * 2036 1698 * * * 34 18 6345 * 1000 1000 * * 6191 1000 0 G 35 3452 * 5083 4811 * 672 * * * * * 3450 6239 5938 5848 3967 * 6208 * * 35 0 * * * * * * 6269 0 0 S 36 6356 * 3054 1031 * 4992 * 5371 3918 * * 4564 6208 3805 * 4629 4140 4976 * * 36 0 * * * * * * 6272 0 0 V 37 3135 * * 4594 * 4928 * 5177 1885 4987 2515 4929 * * 3302 * 3425 3647 * * 37 0 * * * * * * 5564 0 0 G 38 * * * 4970 * 2803 3802 * 5476 4898 * 3389 2373 4674 5132 2056 3787 5159 * * 38 0 * * * * * * 5293 0 0 K 39 * 4738 * * 2734 4538 2806 * 3177 * * 4436 3910 3749 4152 3918 * * * 2278 39 0 * * * * * * 5286 0 0 S 40 3212 * * 3897 * 4789 * 4436 2157 4471 * 4543 4152 4704 4864 1969 4443 * * * 40 0 * * * * * * 5286 0 0 G 41 3455 673 * * * 2494 * * * 3265 * * * * * * * * * * 41 0 * * * * * * 4895 0 0 P 42 * 4217 * * * * * * * * * * 159 * * 4311 * * * * 42 0 * * * * * * 4895 0 0 S 43 2313 * 3444 3624 3691 * 4209 3406 * * * * * 3186 * 2801 3299 * * 4473 43 0 * * * * * * 4787 0 0 S 44 * 640 * 4284 * * * * * * * * 2444 * * 3023 * * * * 44 0 * * * * * * 4348 0 0 G 45 * * * * * 0 * * * * * * * * * * * * * * 45 0 * * 0 * * * 4348 0 0 //