HHsearch 1.5 NAME c2ep8A_ FAM FILE c2ep8A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2ep8A_.a3m DATE Thu Mar 11 14:20:11 2010 LENG 100 match states, 100 columns in multiple alignment FILT 112 out of 304 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.3 EVD 0.4878 2.1491 SEQ >ss_dssp CCCCCCSCSCCTTSSCEEECCSSSCHHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTSCCBTTBEEECTHHHHHHHHHTSCCCTTTCC >sa_dssp EEEEEEEEEEDCAEECBAAACEDBDDECABECAEDCCBDBACCEECDEEBEBDDECEEBDBAAADEBEECEDDEEBDBADBDAADCACEDEEDCDCEECE >ss_pred CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCEECHHHHHHHHHCCCCCCHHHCC >ss_conf 9877665422001884899748898999999997137512312565667521112445772453046530120798477445999998639816855439 >Consensus xxxxxxxxxxxlFxgxxFxixxxxxxxxlxxlIxxxGGxvxxxxxxxxxxxxxxxxxxvThxIxxxxxxxxxxxxxxiVxpxWIxDcixxxklLpxxxYl >c2ep8A_ GSSGSSGKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYF >UniRef50_Q54LN0(692-785:907) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54LN0_DICDI E=0.0008 s/c=0.48 id=18% cov=88% ----------ELFKGFNFIVTGIQESDEISEMISNGGGKIHSLAQFFSLGGsaklkrFCIAGDSPTTTIKYIRSVIEGVPCLNY---EWIVDSIKQAEIL ETDDYL >UniRef50_P49917(653-742:911) DNA ligase 4 n=28 Tax=Euteleostomi RepID=DNLI4_HUMAN E=1e-08 s/c=0.68 id=20% cov=87% ------NKISNIFEDVEFCVMSGTdsqPKPDLENRIAEFGGYIVQNPgPDTYCVIAGSENIRVKNIILSN--------KHDVVKPAWLLECFKTKSFVPW QPRF >UniRef50_P87074(533-652:778) DNA repair protein rhp9 n=1 Tax=Schizosaccharomyces pombe RepID=RHP9_SCHPO E=4e-06 s/c=0.44 id=17% cov=90% -----------IFDDCVFAFSGPVhedayDRSALETVVQDHGGLVLDTGLRPLfNDPFKSKQKKLRHlkpqkrskswnqafVVSDTFSRKVKYlealaFN IPCVHPQFIKQCLKMNRVVDFSPYL >UniRef50_C3YW39(2502-2601:2614) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YW39_BRAFL E=2e-05 s/c=0.51 id=20% cov=76% -------------------------RDDLQFMVELCGGTVVKEPHMFPHDKKPLIVSQIDANQLTEEDYNVFYRRYGVlsVTRDWILDSVSSYQIQPIER YL >UniRef50_Q754I1(111-201:670) AFR095Cp n=1 Tax=Eremothecium gossypii RepID=Q754I1_ASHGO E=0.0002 s/c=0.51 id=19% cov=88% ------------FGGFYVFIgrvaGGRVSAAELQQLCESGGARRVVTSHFVRDTASSARSVFVTDCAEGARAAAAREQGVAVVHPKWVTDCVRRGAVVEM EEY- >UniRef50_UPI00006CBEF5(247-345:346) hypothetical protein TTHERM_00307700 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBEF5 E=0.001 s/c=0.45 id=19% cov=90% ----------DLLENLRFYISekqtkkdQQITKKEMVQLIKLAGGVVIDNNRDEPEEYFHVVITSGAQNIDKNSLKSLKSSSNDgqiIVSHKWLLDSISK GQLLNYKNY- >UniRef50_C7ZDR7(491-583:765) Predicted protein n=2 Tax=Nectriaceae RepID=C7ZDR7_NECH7 E=2e-05 s/c=0.54 id=21% cov=82% -------------SGLVIVLSGLVPLG-----VKVEESEIGMQAQSFGAQVLDTVSKRVTHLVVASSRPRTkkvqqaaKIPSIKIVNQNWLTDCLSQWRR LDERPY- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1682 * * * * 763 * * * * * * * * * 3335 * * * * 1 0 * * * * * * 4239 0 0 S 2 3457 * * * * * * * 3307 * * * * 2442 * 1458 1943 * * * 2 0 * * * * * * 4451 0 0 S 3 1929 * 4248 * * * * * * * * 2436 * * 3766 1810 2822 * * * 3 0 * * * * * * 5080 0 0 G 4 4019 * * 3670 * 1137 * * * * * 4022 * * * 1542 * * * * 4 0 * * * * * * 5238 0 0 S 5 3431 * * * 3688 * * * 3720 * * 2751 * * * 2174 2291 3208 * 3814 5 0 * * * * * * 5407 0 0 S 6 2217 4456 * * * 4491 * * * * * 2357 2302 * 3973 2101 * * * * 6 0 * * * * * * 5743 0 0 G 7 3783 * 3181 4880 * 1015 * * * * * 2624 4154 * * 4615 5100 * * * 7 0 * * * * * * 6192 0 0 K 8 * * 4770 2013 * * * * 1807 6415 * * 3802 4598 3421 3721 4455 3469 * * 8 0 * * * * * * 6587 0 0 H 9 4721 * * 3190 3728 * 2211 3946 3830 4921 5086 3190 4770 3030 * 4443 5495 5235 * * 9 113 4307 5322 2000 415 * * 6587 1610 0 K 10 * 5784 * 4545 * 4132 * * 1448 * * 3602 3716 5398 5439 2717 3045 4762 * * 10 119 3659 * 1003 997 0 * 6899 2134 1000 K 11 * * 2324 3761 * 3170 * * 2679 4857 * 2778 4663 3247 3898 4303 5934 * * * 11 0 * * * * * * 7680 0 0 L 12 * * * * 4250 * * 1432 * 987 5968 * * * * * * 4155 * * 12 46 4987 * 964 1037 * * 7818 1550 0 F 13 * * * * 60 * * * * 5374 5886 * * * * * * * * * 13 25 5886 * 0 * * * 7957 1105 0 E 14 3644 * 2808 2979 5831 5111 6816 5156 2374 * 6389 4365 * 4138 5578 2481 4860 6696 * 6304 14 0 * * * * * * 7971 0 0 G 15 * * 3546 5856 * 633 * * 6106 * * 2880 5094 * * 3784 * * * * 15 0 * * * * * * 7971 0 0 L 16 * 1964 * * 3584 * 5495 4098 4510 2015 3705 * * 5095 5873 * * 2894 * 5014 16 0 * * * * * * 7971 0 0 K 17 6605 6129 6451 4500 6953 * 4661 4556 3369 4656 * 4167 * 7293 3403 3195 2777 2089 * 4425 17 0 * * * * * * 7971 0 0 F 18 4914 * * * 449 * 5912 2935 * 6423 6953 * * * * * * 3893 * * 18 22 6056 * 2322 322 * * 7971 1000 0 F 19 5031 3361 * * 2135 6782 * 6048 * 3601 5057 5659 * * * 4056 * 4720 5649 1435 19 17 6377 * 1000 1000 * * 7978 1000 0 L 20 * 6115 * * 3042 * * 1462 * 2123 * * * * * * * 1880 * * 20 106 3821 * 2081 389 * * 7978 3304 0 N 21 4649 * 3825 5242 5401 4637 3974 4832 6417 3780 4740 2534 * * * 1812 5316 3557 * 6487 21 148 3356 * 2268 336 * * 7984 3926 0 R 22 * 5542 * * * 1124 * * 5466 * * 3775 4461 4483 2803 2792 4432 * * * 22 170 3352 6224 1482 639 * * 7986 3639 0 E 23 * * 2443 2125 5289 5015 5252 4563 5477 4583 * 5742 5216 5401 4189 3365 4525 5096 * 3267 23 149 3354 * 2653 250 * 0 7962 3835 1000 V 24 6106 * * * 4285 * 5320 2548 * 4767 4171 5232 3525 4605 * 3756 2394 2479 * 4389 24 278 2511 * 1847 470 * 0 7962 4970 1000 P 25 5011 * 2706 6051 * 5377 8022 5412 6341 6191 * 4478 1876 5015 * 1933 3288 6550 * * 25 147 3536 6579 1726 519 * 0 7962 3097 1000 R 26 3714 * 3914 5243 5525 6549 5058 5384 1901 3669 6168 6356 4427 4187 2404 4814 * * 6753 4752 26 39 5225 * 1000 1000 * 0 8085 1630 1535 E 27 3922 * 2711 2643 * 5054 5187 5862 3010 4485 5590 5396 4480 4220 6274 3047 4626 4921 * 5197 27 106 4621 5054 1681 539 * 0 8085 2531 1535 A 28 3502 5850 2960 1734 * 6283 * 4018 5556 * 5313 5296 4500 3479 * 4505 4139 3871 * 5983 28 44 5057 * 1467 648 * 0 8031 2132 2520 L 29 * * * * 4738 * 6846 2672 4727 857 4288 * * * 5451 5141 5951 3741 6197 * 29 11 7027 * 1000 1000 * 0 8031 1000 2520 A 30 6704 5252 * 2092 * 5122 6040 4386 3208 6217 * 5556 * 3164 2666 3382 4814 3904 5825 6655 30 0 * * * * 1971 425 8031 0 2520 F 31 4163 6259 4199 4160 3469 * 6049 3700 2252 3653 6536 3883 * 4256 3126 3803 4974 * * * 31 13 6843 * 1585 585 1520 618 8062 1000 2119 I 32 6243 * 6647 4932 * 6755 * 3350 6050 1337 2940 * * 6858 4726 * 4263 2509 6668 6444 32 29 5655 * 1585 585 880 1130 8123 1694 1624 I 33 4305 5892 * * 6453 * * 800 4851 3658 5624 * * * * * 6832 2293 * * 33 0 * * * * * 0 8539 0 1000 R 34 4527 6361 * 3316 * 6631 * 4087 2410 2377 6930 5572 6098 5096 3069 4287 3781 3674 * * 34 16 * 6470 * * * 0 8673 0 1000 S 35 2336 6409 4791 2647 6071 5623 4931 * 3499 4167 5910 4170 * 3852 * 2270 7040 5268 * * 35 37 6239 6385 1585 585 * 0 8658 1000 1599 F 36 4567 3314 * 5268 3513 2615 2435 * 5613 5241 4981 2531 * 6937 6278 4637 * 6810 * 3760 36 0 * * * * * 0 8626 0 2066 G 37 6075 * 6199 6189 * 229 * * 5241 * 6712 5573 * 6005 5625 6416 * * * * 37 12 6873 * 1000 1000 1611 572 8673 1000 2066 G 38 3557 * 6080 5360 * 335 * * 4819 * * 6019 * 6486 * 6249 * 6944 * * 38 55 * 4746 * * * 0 8679 0 1735 E 39 5217 * 5455 3500 5405 4570 * 4482 2367 3886 6491 5161 * 4036 2844 4173 3056 3966 * 6500 39 92 * 4023 * * * 0 8645 0 3427 V 40 * 4306 * * 3782 * * 1805 5185 3373 * 6302 * * 5773 * * 1382 * 4271 40 87 5315 4918 1000 1000 * 0 8706 1626 4395 S 41 4436 4651 * 6832 5255 4564 4126 2940 6524 2457 6142 5631 * 5126 * 2614 * 2384 * 4709 41 81 5842 4750 3585 126 * 0 8736 1000 4594 W 42 4889 6008 3120 5568 5488 6480 5353 6032 5959 4278 4516 3681 6061 2407 4370 4941 4214 5678 3375 3353 42 45 * 5023 * * 2613 258 8694 0 5069 D 43 4725 5439 3318 4111 * * 6115 * * 3605 4947 1943 * 4259 4714 2988 3696 5346 * 3759 43 123 4919 4356 2937 202 3162 171 8717 1764 4765 K 44 3305 * 6119 * 5679 3833 * 4784 4423 2650 5638 4158 2983 6360 5007 2971 5745 2983 * 4879 44 130 6291 3773 0 * * 0 8696 1000 5122 S 45 4118 * 3955 4123 * 3576 4677 4658 3616 3831 6091 5499 3959 4181 4309 2957 2779 5321 * * 45 50 * 4875 * * * 0 8669 0 5394 L 46 3375 5960 3525 3906 3512 6311 5880 4501 3728 3513 4385 4787 5050 5987 4275 3663 6111 3516 * 4410 46 75 * 4307 * * * 0 8493 0 5555 C 47 4106 6196 5071 4095 3486 2711 * 4897 2828 4788 * 3932 3610 * 4502 5197 2956 5524 * 5791 47 36 * 5354 * * 4407 70 8487 0 5688 I 48 4114 5451 4230 4976 * 3106 2977 4009 6096 5623 * 4282 3146 * 4060 3512 3843 4250 * 4062 48 113 4712 4754 1268 774 3702 115 8511 1699 5753 G 49 4391 4053 3780 4623 * 3437 3725 3375 5821 4961 * 2753 4179 4885 4689 5770 3432 4440 * 4995 49 21 * 6143 * * 2297 328 8469 0 5936 A 50 3608 * 3425 4126 5585 5005 4050 2947 5483 3472 * 5097 * 4640 5928 2709 3944 3899 * 4559 50 67 * 4454 * * 2350 315 8531 0 5519 T 51 3625 * 6426 4741 * 5060 5081 4265 3370 2750 * * 3433 4790 3424 5330 2766 3577 * 4820 51 24 5939 * 2585 263 2228 346 8468 1000 5678 Y 52 4185 6554 6102 3545 3181 6483 4991 3094 4613 3664 6623 3051 4012 * 5984 4480 6790 3067 5995 4413 52 16 * 6501 * * 2922 204 8566 0 5301 D 53 4699 5424 2673 3944 * 6148 4478 3775 3662 5358 5053 2629 4483 5395 6371 4546 5139 3935 * 3796 53 0 * * * * 1844 471 8606 0 4988 V 54 3795 * 6603 4039 5138 4750 * 2703 5936 4064 3319 * 4923 5378 6618 3259 4519 4020 * 2439 54 19 6262 * 3170 170 2078 390 8667 1000 4782 T 55 3988 * 2070 4186 6430 6240 * 3314 4925 3185 4648 3515 5535 * 4538 4756 3828 3917 6648 * 55 49 * 4905 * * 1596 579 8688 0 4349 D 56 4972 6219 2781 6172 5947 4309 6602 3126 3800 5878 6202 3174 5489 4563 4272 2451 4461 4600 * 7719 56 16 * 6531 * * 1745 511 8648 0 4196 S 57 3306 * 3538 3845 * 4611 * 4769 3663 5125 * 2950 3697 6498 3205 2780 3857 5842 * * 57 66 * 4488 * * 3326 152 8699 0 3855 R 58 5423 * 2973 4157 4886 5204 4615 4403 3722 4340 5788 3832 5232 4950 3330 2359 4858 5976 * 5208 58 76 6184 4731 2322 322 971 1030 8688 1000 4611 I 59 3411 3220 * 5170 * 4682 5906 2305 4761 6099 6467 6164 4217 * * 5220 4458 1689 * * 59 96 * 3961 * * 1973 424 8655 0 4320 T 60 5557 * 4437 * * 6383 * 5862 4277 6196 * 3443 6041 6500 4218 4308 726 6473 * * 60 17 6383 * 3000 193 1808 485 8572 1000 4782 H 61 5149 * 5858 6089 6375 5177 861 6515 5231 6592 * 5314 4694 3570 5293 6284 6217 6430 * 3471 61 38 6117 6453 3807 107 3074 182 8666 1000 4078 Q 62 5989 4930 6088 4766 4748 6460 5551 2934 4288 2817 * 3701 6198 6668 5808 * 4806 1966 * 3376 62 30 6449 6802 2807 222 * 0 8600 1000 4160 I 63 5085 * * 5312 * * 6048 909 5896 4684 * 6232 * 5980 6386 5218 * 1964 5800 * 63 92 5573 4615 2007 413 2259 338 8586 1661 4289 V 64 2613 3307 4783 3646 * * * 3900 5235 3175 * * * * 5799 3383 2744 2829 * 6464 64 54 5245 6563 1225 805 1748 510 8547 1716 4931 D 65 4145 5439 2916 3152 * 4052 5081 6178 3736 5488 5572 4756 5008 4479 4666 3524 2935 5226 7101 4339 65 86 4981 5264 2161 365 1601 577 8567 2046 4048 R 66 4114 * 5349 3581 6469 6903 5019 4504 3247 4248 6109 2915 * 6281 2438 3148 4615 4140 * 5227 66 42 7003 5592 1000 1000 * 0 8634 1000 3957 P 67 4661 * 5206 3568 4895 5191 * 4703 4733 3006 * 3341 2966 5301 4337 3613 3970 3780 * 3883 67 58 5229 6324 2030 405 1758 506 8604 2038 4522 G 68 3562 5477 4465 4465 7163 3663 5295 5826 3173 3735 6975 4213 5076 7324 4227 2870 3209 5611 4473 5278 68 32 6886 6231 2807 222 2010 412 8635 1000 4017 Q 69 3976 6614 3532 4512 5139 4013 7174 5878 3276 4255 4872 3348 4196 4709 4909 3606 3421 4198 * 4729 69 37 6574 6109 1585 585 1735 515 8644 1000 3832 Q 70 3006 5547 4712 3165 5398 4520 6308 3489 4297 4041 * 3660 5361 4535 3568 3333 4237 5227 6157 * 70 36 6007 6828 1855 467 * 0 8600 1567 3435 T 71 5039 * * 3321 * 4826 5590 3926 1438 3518 4788 5260 * 6410 4733 5647 3583 3713 * * 71 208 2894 * 2347 316 1201 824 8641 4588 3557 S 72 3758 * 4211 3105 5958 5178 5008 4403 3337 3484 4922 4234 * 4328 3100 3654 6656 5096 6408 3999 72 43 6081 6122 2908 206 * 0 9116 1648 2486 V 73 5095 * 5266 3241 4387 5813 5593 4146 4807 3568 7595 2600 6316 5872 2919 5112 4858 3340 5790 3967 73 85 5311 4972 2684 244 632 1495 9074 1832 2790 I 74 3888 6508 3798 3384 4642 5746 6595 4048 2504 4806 7429 4573 3009 4073 4166 4642 5260 * 6962 4293 74 138 3877 5431 2248 341 1072 932 9133 3886 2832 G 75 3895 6107 3714 4889 5968 2407 4842 * 3096 5308 * 2759 5468 4643 4500 3832 4268 4950 * 5810 75 72 5276 5436 2132 374 508 1753 9091 1924 2590 R 76 6529 3856 7181 5808 5409 * 5790 2645 3197 3421 6632 4661 5777 5252 2641 7538 5373 2934 * 3705 76 40 5181 * 1344 722 2291 330 9142 1952 2421 C 77 5072 5213 2418 6812 6356 5975 3937 3484 2226 5347 * 4518 3631 6042 4273 4986 4328 4224 * * 77 63 4550 * 2198 355 669 1430 9150 3359 2138 Y 78 5758 4738 * * 3196 * 6528 1441 * 5273 * * * * * * 5856 2096 4159 3025 78 137 3693 6233 1911 446 0 * 9168 3998 1000 V 79 6192 5634 * * * 6426 * 2299 * 4525 5927 * * * * * 6573 554 * * 79 14 6714 * 1000 1000 * 0 8995 1000 1000 Q 80 5927 * 6598 * * 5842 3369 * 2789 5377 * 4616 5943 3339 2749 2308 2593 6426 * 7294 80 0 * * * * * 0 8995 0 1000 P 81 4076 * * 5652 5285 * 4988 5659 8154 6098 6037 6270 766 6808 6038 4596 4134 3783 * 6118 81 17 6426 * 2000 415 0 * 8995 1000 1000 Q 82 4324 * 3477 3132 * * 6410 6017 2580 * * 4126 * 1925 3984 3101 4710 6237 * * 82 24 5944 * 0 * * * 9035 1000 0 W 83 * * * * 3437 * * * * * * * * * * * * * 250 3906 83 0 * * * * * * 9035 0 0 V 84 5790 6231 * * 4030 * * 1220 * 2521 * * * * * * * 1718 * * 84 0 * * * * * * 9035 0 0 F 85 6723 * 6020 5345 2018 * * 3588 5145 2242 5307 5499 * 4992 5374 5130 3403 4053 6875 3536 85 0 * * * * * * 9035 0 0 D 86 3992 * 542 3346 * * 6056 * 4851 5988 * 5407 * 5657 7029 5414 6374 * * * 86 0 * * * * * * 9035 0 0 S 87 6056 790 * * * * * * * * * * * * * 1346 6237 * * * 87 0 * * * * * * 9035 0 0 V 88 5470 7202 6511 * 4392 * 6452 1412 * 2076 7172 6863 * * * 5577 * 2062 * 6412 88 15 6639 * 2807 222 * * 9035 1000 0 N 89 4088 7406 4147 3149 * * * * 2263 6086 5898 2618 * 4632 2910 2902 4151 * * * 89 0 * * * * * * 9029 0 0 A 90 2851 5662 5952 2470 5727 * * * 2732 5024 6148 4843 * 2598 4043 3272 5656 * 6219 4910 90 0 * * * * * * 9029 0 0 R 91 5120 * 6859 4937 4925 1428 6237 * 2725 6004 6080 3188 * 3985 4226 5086 * * 4881 4614 91 0 * * * * * * 9029 0 0 L 92 5128 6058 6532 3371 * 6331 * 5116 1696 5270 6744 6502 * 3227 2825 4647 3421 5093 * 4562 92 23 5969 * 3000 193 * * 9206 1000 0 L 93 5258 * * * 4965 * * 2784 3744 1204 5345 * 6432 5702 3104 * * 3104 * * 93 0 * * * * * * 9206 0 0 L 94 6562 * * 6523 * * * 3752 * 639 4882 * * 4012 5703 * 5925 2935 * * 94 0 * * * * * * 9190 0 0 P 95 4987 6475 2208 4605 * 5290 * * 5998 6419 * 4159 1131 5906 * 3088 * * * * 95 21 6146 * 0 * * * 8984 1000 0 V 96 5165 4563 * 2395 3786 * 5108 2887 6341 3616 5060 * 4902 * * 6417 3727 3283 3794 3579 96 0 * * * * * * 9099 0 0 A 97 3253 * 3656 2061 * 5003 5167 * 3565 6806 6146 4023 * 3906 3608 3274 3615 6125 * * 97 0 * * * * * * 9090 0 0 E 98 5926 * 3290 2612 * 4719 * * 3433 4008 * 3357 1768 4995 3718 6087 6416 * * * 98 16 6503 * 0 * * * 9097 1000 0 Y 99 * * * * 3444 * * * * * * * * * 5004 * * * * 189 99 0 * * * * * * 7677 0 0 F 100 * * * * 1895 * * * * 452 * * * * * * * * * * 100 0 * * 0 * * * 6317 0 0 //