HHsearch 1.5 NAME c2eomA_ FAM FILE c2eomA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2eomA_.a3m DATE Wed Mar 10 11:22:16 2010 LENG 46 match states, 46 columns in multiple alignment FILT 130 out of 12303 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.0 EVD 0.5269 2.4741 SEQ >ss_dssp CCCCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCCC >sa_dssp EEEEEEEEEEECDEAEEDEEDBEEDDEBEEBDEECEEEEEEEEEEE >ss_pred CCCCCCCCCCCCEECCCCCCEEEECCCCEEEEEEECCCCCCCCCCC >ss_conf 9878775588949975578833002437542334178824100586 >Consensus GrxxxxxxgekpxxCxxCxkxFxxxxxlxxHxxxHtgekpyxCxCG >c2eomA_ GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSSG >UniRef50_Q0VGV0(546-592:670) Zinc finger protein 568 n=10 Tax=Euarchontoglires RepID=Q0VGV0_MOUSE E=5e-12 s/c=1.53 id=26% cov=102% ARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCkECG >UniRef50_UPI000180CFB8(376-422:499) PREDICTED: similar to growth factor independent 1 n=1 Tax=Ciona intestinalis RepID=UPI000180CFB8 E=9e-07 s/c=1.16 id=28% cov=102% GQHKASHNREKVFECHICHKTFKRSSTLSTHLLIHSDTRPFPCpYCG >UniRef50_B7PTE4(145-188:316) Zinc finger protein, putative n=1 Tax=Ixodes scapularis RepID=B7PTE4_IXOSC E=0.0007 s/c=1.02 id=24% cov=98% GSRVVKTPTERRFKCDRCDRSFFTRKDVKRHMVVHTGQRNFVCQ-- >UniRef50_C3XZH5(86-128:210) Putative uncharacterized protein n=2 Tax=Branchiostoma floridae RepID=C3XZH5_BRAFL E=0.0001 s/c=1.10 id=27% cov=80% --------GDRPLTCPKCYYRAARKISITRHMRNHSGERPFTCQ-- >UniRef50_Q5C1T8(127-169:225) SJCHGC09220 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5C1T8_SCHJA E=0.0002 s/c=1.10 id=33% cov=93% --KSAVHEGKRPHLCDVCGARFTQRVHLKQHKSTvHEGQKPYQCN-- >UniRef50_B1AZK8(147-191:666) Novel zinc finger protein (Fragment) n=63 Tax=Murinae RepID=B1AZK8_MOUSE E=0.0004 s/c=1.01 id=30% cov=87% -------NGEKQYKYNQCDKAYSQKSILQIHKRTYTREKSYKCNpCG >UniRef50_Q16ST8(482-523:549) Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q16ST8_AEDAE E=3e-06 s/c=1.27 id=28% cov=87% -----SHTGERPYPCRHCSMSFASVPIRRMHEMTHSEIKPFKCT-- >UniRef50_Q9Y791(219-266:285) YALI0B21582p n=1 Tax=Yarrowia lipolytica RepID=Q9Y791_YARLI E=6e-05 s/c=1.01 id=28% cov=102% GRKPSIDDSKKTFVCTHCQRRFRRQEHLKRHFRSlHTREKPFNCdTCG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 3047 * * * * 186 * * * * * * * * * * * * * * 1 0 * * * * * * 4875 0 0 S 2 5383 * 5750 * * 5489 * * 3600 * * * 5560 4808 954 2134 4269 * * * 2 0 * * * * * * 5458 0 0 S 3 4935 * * 5940 * * 2129 * 4376 6590 * 4964 4793 4763 1775 2770 3298 5756 * * 3 0 * * * * * * 5580 0 0 G 4 3727 * 5764 4841 * 2039 3393 * 3572 4862 * 4071 4142 5080 4053 3418 4142 4106 * * 4 0 * * * * * * 5606 0 0 S 5 2795 * * * 6486 6141 6134 * 3685 3575 * 6291 4059 * 3240 1656 4564 3420 5430 * 5 0 * * * * * * 5637 0 0 S 6 2513 * * 4532 * 4592 4463 4620 4763 5752 * * 4200 3932 5426 1683 3078 5284 * * 6 0 * * * * * * 5725 0 0 G 7 3171 * 5618 6070 * 3770 1366 * 4187 * * 3809 6376 4624 3888 3793 3973 6599 * * 7 13 * 6835 * * * * 5761 0 0 H 8 4735 6733 4215 5372 * 4109 2458 5972 4154 4757 * 3453 3699 5017 5771 3550 2252 6251 * * 8 11 6987 * 2322 322 * 0 5811 1000 1000 G 9 4897 * 7168 4173 * 546 * * 5169 * 5993 5357 6884 6393 4581 4975 4418 6574 * * 9 24 7204 6702 0 * * 0 5905 1000 1000 E 10 6734 * 3933 979 6933 5914 * 5434 2798 5750 6714 7187 5913 4014 5011 5878 5729 4449 * * 10 60 4623 * 1476 643 1040 962 5984 2573 1482 R 11 5284 * 5912 7626 6734 4921 * 6406 982 7072 6836 7503 5621 6458 1736 6931 5657 6554 * * 11 0 * * * * 0 * 6116 0 1000 G 12 6352 7243 7195 7370 * 5984 7374 5668 3525 4720 5856 4909 1021 4790 4316 3337 4249 5586 * * 12 24 5898 * 1014 987 * * 6120 2019 0 H 13 * 6528 6621 * 1572 * 2433 6818 * 5534 * * * * * 5128 * 7011 5762 1425 13 16 6548 * 2190 357 * * 6120 1613 0 R 14 5026 * 7053 3448 5368 5600 4467 4421 2326 5929 6215 5878 4592 3042 2958 3823 4461 3806 * 6951 14 16 7374 7573 2322 322 * * 6120 1000 0 C 15 * 106 * * 5880 5296 * * * * * * * * * * * * * 5141 15 28 5712 * 1000 1000 0 * 6125 2050 1000 S 16 5721 6127 2784 2916 * 5236 4577 6756 3979 6664 7167 3472 2743 4602 4462 2737 4423 6893 * * 16 7 7699 * 1000 1000 * * 6120 1000 0 D 17 * * 4595 2552 4259 4760 3565 2843 4556 3911 5299 6337 * 3004 7276 7214 5994 3065 7224 4363 17 24 5950 * 1000 1000 * * 6120 1935 0 C 18 * 83 * * * * * * * * * * * * * * * * 5049 5297 18 0 * * * * * * 6120 0 0 G 19 * * 3328 4790 6332 1390 5811 7230 5140 5516 7442 3704 3341 4489 4722 3508 4501 * * * 19 34 5415 * 0 * * * 6120 1244 0 K 20 4338 * * 6756 7417 7186 6746 6236 936 6718 5803 5721 * 3803 2887 5390 * 6940 7263 3450 20 0 * * * * * * 6120 0 0 F 21 2864 4982 4338 6462 5490 4006 * 5533 4145 * 6107 * 6818 4402 3322 2076 2843 4350 * 6462 21 0 * * * * * * 6120 0 0 F 22 4785 5832 7190 * 401 * * 6718 * 5248 * * * * * 5011 5519 6918 * 3552 22 32 6304 6787 2585 263 * * 6120 1000 0 L 23 2945 * 6906 * 5353 5012 5834 5057 3682 4505 7433 3789 4241 6382 3047 2611 3189 4097 6052 5268 23 0 * * * * 0 * 6116 0 1000 Q 24 6077 5805 3997 5350 6051 5489 4726 5394 4333 4941 6113 5105 * 2630 2675 3341 3864 4314 4069 4057 24 0 * * * * * * 6120 0 0 A 25 4156 * * 4868 4872 7216 4792 * 2244 4208 * 3729 3352 3454 2911 3222 5201 5923 * 5706 25 0 * * * * * * 6120 0 0 S 26 3903 5424 5159 3777 6893 3472 4656 7071 5503 4481 5721 5268 6761 5600 4021 1601 4425 4637 6847 4831 26 0 * * * * * * 6120 0 0 N 27 3857 4888 3594 4629 6689 6079 3370 4698 4424 4071 6236 2199 * 5415 7089 3283 4262 5371 6304 4193 27 0 * * * * * * 6120 0 0 F 28 * * * * 3639 * 4485 5430 6658 730 4598 5415 * * 4921 * * 5253 3773 4567 28 0 * * * * * * 6120 0 0 I 29 4315 6304 5485 4123 6220 * 5306 3296 2287 4580 5255 4213 * 4218 3108 4563 3429 4141 7186 5529 29 0 * * * * * * 6120 0 0 Q 30 4234 5631 4688 3657 * * 4462 4291 3013 4756 6761 4005 6411 3941 2233 4092 4531 3681 * 6599 30 0 * * * * * * 6120 0 0 H 31 * * 6349 * * * 162 * * 5178 * * * 6485 6304 6787 5837 * * 5996 31 0 * * * * * * 6120 0 0 R 32 5813 * * 3781 5977 6898 5141 3587 3339 3219 2219 7462 * 2725 3402 6664 6301 3883 * 6528 32 0 * * * * * * 6120 0 0 R 33 5367 7510 * 6528 6289 6057 6440 4038 2940 3791 4685 5584 * 5292 1364 4305 4885 4125 6335 5115 33 11 7073 * 0 * * * 6120 1000 0 I 34 4683 * * * * 6678 6200 2043 4592 4211 5969 6335 * 4364 4529 3646 1949 3142 7144 5640 34 30 6433 6842 0 * * * 6122 1662 0 H 35 * * * * * * 133 * * * * 4534 * * 5644 * * * * 5337 35 0 * * * * 0 * 6114 0 1000 T 36 3913 6841 6110 6948 * 6276 * 7254 6149 5228 5530 3742 * 5049 5141 2548 1013 6940 * 6320 36 34 6291 6566 0 * * * 6121 1564 0 G 37 4613 7286 3914 3005 * 1097 * 7011 4122 5007 * 4002 * 5953 4765 4788 5661 5216 * * 37 14 6694 * 0 * * 0 6103 1000 1000 E 38 5130 * 3236 961 6921 5625 7271 5121 3665 5517 5195 6168 7162 3908 * 6318 6122 4450 * * 38 0 * * * * 0 * 6103 0 1000 K 39 * * * 5585 6879 * * * 824 7153 6033 6904 * 4760 1860 5173 5549 * * 6187 39 0 * * * * * * 6122 0 0 P 40 5234 6315 6425 6052 6333 * 6655 * 5239 4793 6839 5050 658 5155 4595 3714 6458 6704 * 6646 40 0 * * * * * * 6122 0 0 S 41 * * 6415 * 1437 * 3265 * 6268 5587 * * 5805 * * 6626 * * 6509 1177 41 40 5177 * 0 * * * 6117 2115 0 G 42 4221 3899 * 2875 7074 4875 5352 5153 1859 7009 * 7307 4814 3621 5789 4188 4564 3133 6246 * 42 0 * * * * * * 6117 0 0 P 43 * 108 6080 * * * * * * * * * 4129 * * * * * * * 43 374 2130 * 0 * * * 6117 3934 0 S 44 6596 * 5028 2479 * * * * 4091 5733 * 3149 5594 2244 * 2080 3312 * * 5618 44 739 1319 * 248 2661 * * 5814 4057 0 S 45 * 49 * * * * * * * * * * * * * 4893 * * * * 45 0 * * * * * * 4986 0 0 G 46 * * * * * 0 * * * * * * * * * * * * * * 46 0 * * 0 * * * 4931 0 0 //