HHsearch 1.5 NAME c2entA_ FAM FILE c2entA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2entA_.a3m DATE Wed Mar 10 08:50:36 2010 LENG 48 match states, 48 columns in multiple alignment FILT 102 out of 11049 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.4854 1.4953 SEQ >ss_dssp CCCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC >sa_dssp EEEEEEEEEEDECDBEDEECEEEBCEDEDBDEBDEECEEEEECEEEEE >ss_pred CCCCCCCCCCCCEEECCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC >ss_conf 977750378756264575266701355454010230285836505896 >Consensus xxxxrxHtgekpyxCxxxxCxkxFxxxxxlxxHxrxHtgxkpxxCsxg >c2entA_ GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG >UniRef50_A2A7I1(218-260:336) Novel KRAB box domain containing protein (Fragment) n=15 Tax=Murinae RepID=A2A7I1_MOUSE E=7e-05 s/c=1.13 id=30% cov=92% -SQQRIYPGKKSYK--YSESDKCFTQPSHLSIHHTIHSGEKPYKCS-- >UniRef50_Q8BI67(506-548:892) Zinc finger protein 473 homolog n=5 Tax=Murinae RepID=ZN473_MOUSE E=3e-05 s/c=1.16 id=29% cov=88% ----RVHSGFRPHQCPV--CARTFNRPSHLVRHRLRHAEERHFGCAK- >UniRef50_Q6AX11(309-345:980) Znf420 protein n=4 Tax=Xenopus RepID=Q6AX11_XENLA E=0.001 s/c=1.21 id=34% cov=79% -------TAEKPFTCT--ECGKTFTRKGTFDKHQKIYTWENPFTCT-- >UniRef50_B0WF93(420-464:597) Zinc finger protein n=1 Tax=Culex quinquefasciatus RepID=B0WF93_CULQU E=0.0001 s/c=1.06 id=28% cov=96% ASHERMHQNLRPFECQL--CTKGFASAAYLKAHMLSHSTAKPFVCAT- >UniRef50_C3YP36(117-159:469) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3YP36_BRAFL E=8e-05 s/c=1.12 id=32% cov=92% GTHRVNHTGEKPYRC--GQCEYSTANRSYLSLHKKVHKGEKVYSC--- >UniRef50_C3ZDM6(22-69:89) Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZDM6_BRAFL E=5e-05 s/c=1.02 id=30% cov=92% ----SIHTGKRQFTCDVEGCNYRATNKHHLTVHMRKHTSERPskaFPCDR- >UniRef50_UPI0001924EB4(175-213:1092) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001924EB4 E=0.0002 s/c=1.19 id=31% cov=81% ------HFKEKEFQCSV--CNKMFSRKHILNIHMATHVDSKDYKCT-- >UniRef50_C1N290(107-153:210) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N290_9CHLO E=6e-07 s/c=1.18 id=33% cov=100% -SHAMTHTTSRPHACPHEGCGKAFKTEKAVASHARTHTGEKPYRCTFG >UniRef50_C3Y5N6(3016-3057:4574) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y5N6_BRAFL E=0.0007 s/c=1.08 id=28% cov=83% ----RTHTGERPFQCQH--CPYSARQVTNMNRHTYQHFANLPHKC--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 2187 * * * * 358 * * * * * * * * * * * * * * 1 0 * * * * * * 3113 0 0 S 2 * * * 3843 4010 * 3940 * * * * * * 4160 4128 809 3068 * * * 2 0 * * * * * * 3882 0 0 S 3 * * * * * * 770 * * * * * 4175 3866 3245 2441 * * * * 3 0 * * * * * * 3983 0 0 G 4 2012 4502 4437 3371 * 2053 * * 2980 * 4556 * * 3224 4386 * * * * * 4 0 * * * * * * 4240 0 0 S 5 4654 * * * * * * * 3252 * 5953 4035 6036 4907 681 4028 4485 * * * 5 15 6560 * 1000 1000 * * 5755 1000 0 S 6 5108 6628 6082 6458 * * 6265 2880 3968 4298 5817 * * 5159 4052 2666 1843 3109 6258 * 6 0 * * * * * * 5828 0 0 G 7 6052 * 6408 * * 5308 141 * * * * * * 5759 * * * * * 5483 7 0 * * * * * * 5701 0 0 T 8 5603 * 6830 5779 5710 6844 * 5539 5872 5146 5666 4177 5523 5677 * 2381 909 5888 * * 8 11 7037 * 0 * * * 5745 1000 0 G 9 5413 * 4164 4291 * 985 6513 6585 4042 * * 3150 7068 4901 3537 5426 6456 * 6975 * 9 12 6928 * 1585 585 * * 5747 1000 0 E 10 7261 * 2766 1053 5072 5715 6669 5064 4008 5195 * 6753 6397 4057 6860 4721 6812 4577 * 6990 10 0 * * * * * * 5716 0 0 K 11 5292 * * * * 6397 6985 6464 1060 6778 5642 5975 * * 1423 * 5692 5904 * 6703 11 27 5729 * 1278 767 * * 5716 1420 0 P 12 4871 6831 * 5589 * * 5435 5480 3795 6592 * 5369 601 5705 4530 4662 * 5445 * * 12 16 6462 * 1000 1000 * * 5716 1000 0 F 13 * * * * 1333 * 3405 * * 5233 * * * * * * * 6209 * 1094 13 0 * * * * * * 5727 0 0 A 14 3809 * * 3503 * 6629 4470 4496 1864 6774 6512 6160 5169 3621 5755 3672 4108 2697 * 6172 14 95 * 3971 * * * * 5727 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 121 * 3634 * * * 0 5677 0 2285 T 16 6801 * 2429 3506 * 6421 4082 * 3588 * * 3476 3128 3773 4776 3207 2991 * * 6024 16 141 * 3429 * * 1336 727 5573 0 3321 W 17 5315 * * 4381 3812 * 3460 2536 * 3214 5304 * * 6649 4816 * * 2957 3516 2338 17 1090 6188 953 4700 57 1118 891 5988 1000 3838 P 18 4138 3933 3540 2299 * * * * 2849 * * 4696 1791 * 5069 3437 * * * * 18 0 * * * * 2402 303 5338 0 5240 G 19 * * 3405 2425 5206 1304 5313 * 3956 * * 4416 * 4112 * 4254 5462 5797 * * 19 80 4213 * 4768 54 0 * 5303 1847 5007 C 20 * 77 * * * * * * * * * * * * * 5559 * * * 5028 20 20 6214 * 1585 585 * * 5727 1000 0 G 21 5960 * 2879 5360 5767 1613 5181 * 3950 5644 * 3475 3301 5789 6357 3740 3986 * * 7251 21 0 * * * * * * 5727 0 0 W 22 5650 * * 6096 6372 * 6781 6214 1049 5230 4036 6613 * 5233 2640 4818 * * 5559 3238 22 0 * * * * * * 5727 0 0 R 23 2967 4044 * * * 3844 * 6472 4156 5241 6759 6183 5056 4804 2804 1968 3003 5361 * 6456 23 14 6680 * 1000 1000 * * 5727 1000 0 F 24 4718 6472 * * 424 * 6214 5574 * 5078 * * * * * 5982 4254 * * 3778 24 0 * * * * * * 5727 0 0 S 25 2673 5984 6680 * 6209 * 7192 4383 2941 4818 5412 4407 4586 6062 3621 2805 2585 5254 6764 5055 25 0 * * * * * * 5727 0 0 R 26 5246 6713 4396 6781 6810 5522 5173 6761 4947 3905 5450 4200 * 2900 1924 3422 3841 5721 5153 4162 26 0 * * * * * * 5727 0 0 S 27 3335 * * 4844 5913 5467 6989 5331 2099 4643 6254 3897 3274 5073 3783 2692 6812 4437 * 5323 27 0 * * * * * * 5727 0 0 D 28 4830 6804 3293 3525 6222 4209 4821 5295 6682 * 6619 4761 6558 4888 4334 1645 3407 6651 5194 4772 28 0 * * * * * * 5727 0 0 E 29 3251 * 3414 6429 5316 6558 2507 * 4837 4109 * 2419 * 5552 4609 3256 3633 6472 * 4678 29 0 * * * * * * 5727 0 0 L 30 6372 4940 * * 3927 * * * 6613 664 3810 * 6254 * 4067 * * 5794 4628 4451 30 0 * * * * * * 5727 0 0 S 31 4288 * 6357 4988 4867 6521 5147 3604 2602 4665 5604 4121 * 4675 2444 3395 4168 3888 * 5250 31 0 * * * * * * 5727 0 0 R 32 3504 * * 4245 6566 5487 5152 4779 2909 6774 6764 4417 * 3548 1948 3481 4859 3865 * 5267 32 0 * * * * * * 5727 0 0 H 33 * * * * * * 64 * * 6145 * 6084 * * * * * * * 6096 33 0 * * * * * * 5727 0 0 R 34 4541 * * 3928 6521 * 5053 4090 3417 2742 2463 7027 * 3385 4036 4748 5797 3111 * 4975 34 73 4349 * 722 1345 * * 5727 2664 0 R 35 5305 6903 5784 * 6956 6512 4589 5108 2284 3600 5814 5609 * 4603 1330 5752 5076 5323 6804 6455 35 10 7222 * 0 * * * 5727 1000 0 S 36 5073 5913 * * * 5068 5624 2977 3539 4102 4237 5223 * 6455 4112 3071 2068 3237 * 5654 36 29 5631 * 399 2049 * * 5727 1624 0 H 37 * 6254 * * * * 169 6369 * * * 5161 * 6363 6357 6565 * 5484 * * 37 0 * * * * * * 5727 0 0 S 38 3998 * * 4994 6455 5777 3786 5127 6872 4086 6510 4306 7169 7329 5022 2396 1380 6101 * 6183 38 14 * 6734 * * * * 5727 0 0 G 39 4141 * 3580 3784 6636 1098 5443 * 4562 * 5347 3770 * 4810 4123 5489 5577 6586 * * 39 26 6548 7175 0 * * 0 5737 1000 1000 V 40 5210 * 2897 1426 * 7005 5471 3424 5051 5529 6333 4108 6534 3880 * 5931 4511 4079 6227 6738 40 0 * * * * 0 * 5738 0 1548 K 41 6720 * 6636 4699 5850 * * 6357 1045 5040 * 6700 * 5524 1793 4795 5503 * * 5682 41 0 * * * * * * 5726 0 0 P 42 4262 * 4332 5450 * * 6339 * 5089 5473 6426 4927 727 5644 3462 5322 5884 * * 6709 42 10 7110 * 1585 585 * * 5726 1000 0 S 43 * 6387 6193 * 1366 * 3036 * 5522 5370 * 6521 5328 * * 4787 6558 * 6831 1612 43 0 * * * * * * 5711 0 0 G 44 3621 * * 4022 6646 4909 6606 4960 2152 5009 6553 6549 3546 3289 3709 4291 5071 3004 6658 6125 44 0 * * * * * * 5706 0 0 P 45 * 127 * * * * * * * * * * 3564 * * * * * * * 45 0 * * * * * * 5696 0 0 S 46 2980 * 3651 4702 * 5861 4974 * * * * 6167 5879 * 4793 1514 1874 * * 5955 46 0 * * * * * * 5418 0 0 S 47 * 3440 * * 5046 * * * 2509 * * * * 2140 2365 2340 3585 * * * 47 0 * * * * * * 4929 0 0 G 48 * * * * * 0 * * * * * * * * * * * * * * 48 0 * * 0 * * * 2788 0 0 //