HHsearch 1.5 NAME c2en8A_ FAM FILE c2en8A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2en8A_.a3m DATE Wed Mar 10 19:55:20 2010 LENG 46 match states, 46 columns in multiple alignment FILT 103 out of 11134 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.8 EVD 0.5076 2.2695 SEQ >ss_dssp CCCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC >sa_dssp EEEEEEEEEEEBDDAEEDDEDCEEEDBBDECCEECDEEDEEEEEED >ss_pred CCCCCCCCCCCCEEECCCCCEEEECHHCCEEEEEECCCCCCCCCCC >ss_conf 9878888877764866578576130005100342057557768898 >Consensus GxxxxxhtgekpyxCxxCxkxFxxxsxLxxHxrxHtgeKxxxxxxg >c2en8A_ GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG >UniRef50_Q9NQX1(364-404:630) PR domain zinc finger protein 5 n=48 Tax=Euteleostomi RepID=PRDM5_HUMAN E=0.0005 s/c=1.10 id=30% cov=72% -------SEDKPYKCKLCGKGFAHRNVYKNHKKTHSEER------- >UniRef50_C3ZU94(412-453:584) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3ZU94_BRAFL E=0.0003 s/c=1.11 id=30% cov=87% GRGRLPSRAKKEFICRFCGRHFTKSYNLLIHERTHTDER------- >UniRef50_UPI000180CFB8(376-422:499) PREDICTED: similar to growth factor independent 1 n=1 Tax=Ciona intestinalis RepID=UPI000180CFB8 E=3e-06 s/c=1.13 id=30% cov=87% GQHKASHNREKVFECHICHKTFKRSSTLSTHLLIHSDTR------- >UniRef50_Q1RLF7(119-157:495) Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLF7_CIOIN E=2e-05 s/c=1.29 id=30% cov=72% -------PGIRPHMCETCGKRFSLLENMHRHQLIHSNDR------- >UniRef50_C3YTR3(212-256:1052) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YTR3_BRAFL E=9e-05 s/c=1.06 id=30% cov=87% GEHGDKHTVGSTYVCEDCGYRTATKIGLSRHMRKHTGEK------- >UniRef50_A7SEP2(277-321:447) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7SEP2_NEMVE E=4e-06 s/c=1.17 id=30% cov=93% ----LSHRGEEPYKCDQCTRAFKNKRQLTKHMYTHTGKPFTCPTCG >UniRef50_B6QH74(341-381:440) C2H2 finger domain protein, putative n=2 Tax=Trichocomaceae RepID=B6QH74_PENMQ E=4e-05 s/c=1.20 id=28% cov=87% GHGQSAPPNDRPFKCDQCPQSFNRNHDLKRHKRIHLSVK------- >UniRef50_Q4TAH9(10-47:535) Chromosome undetermined SCAF7324, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TAH9_TETNG E=0.001 s/c=1.17 id=28% cov=85% -------PGEKPYRCPHCDYAGTQSASLKYHLERHHRERQNGSTS- >UniRef50_A8NNK8(576-621:959) Zinc finger, C2H2 type family protein n=1 Tax=Brugia malayi RepID=A8NNK8_BRUMA E=8e-05 s/c=1.05 id=25% cov=78% ----LTHSDERPFKCTLCEYKSRSRNHLIGHIRNHTVDK------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 4397 * * * * 70 * * * * * * * * * * * * * * 1 0 * * * * * * 4583 0 0 S 2 4083 * * 2799 * * 4895 * 4087 * * * * 1274 3448 2324 * * * * 2 0 * * * * * * 5196 0 0 S 3 4845 4892 * 4181 * 3355 1665 * 5295 4170 * * 4955 5182 * 2989 2905 3989 * * 3 0 * * * * * * 5196 0 0 G 4 5258 * 5575 * * 1086 * * 3767 * * 3937 5498 3159 5057 2965 4299 * * * 4 0 * * * * * * 5252 0 0 S 5 5794 * 4929 * * * * 5317 5492 1708 4008 4819 3259 5850 3743 2375 4483 3960 * * 5 0 * * * * * * 5439 0 0 S 6 3059 * * 4876 5429 4390 * 4774 5318 6147 * * 2685 3689 * 1818 2670 5286 * * 6 0 * * * * * * 5668 0 0 G 7 * * 4814 3746 * 4969 764 * 6152 * * 3421 5258 5499 4026 4944 5669 * * * 7 0 * * * * * * 5668 0 0 S 8 3888 * 5899 6339 * 5506 * * 5670 * 6110 4645 3560 6675 5488 2007 1207 6865 * * 8 10 * 7198 * * * * 6135 0 0 G 9 5273 * 5528 4809 * 617 * * 4129 * * 5262 6535 6157 4581 4395 4823 5551 6510 * 9 0 * * * * * 0 6148 0 1000 E 10 5711 6531 4068 908 6449 4883 * 5457 3599 6571 * 5694 7018 3398 5095 5648 6983 4737 * * 10 16 6478 * 733 1328 0 * 6357 1559 1000 K 11 * * * 5705 * 6402 * * 1077 * 4423 4526 6718 5833 1535 5702 6173 * * * 11 0 * * * * * * 6360 0 0 S 12 5688 6769 5837 5468 4947 * * 5598 3769 4555 * 4215 879 4706 4011 4863 5897 6242 * * 12 12 6901 * 1000 1000 * * 6360 1000 0 H 13 * 4384 * * 1755 * 3157 * 6445 5509 * * * * * * * * 5662 1028 13 0 * * * * * * 6360 0 0 T 14 4336 * 5404 3034 6654 5653 5272 3885 1835 6683 6821 * 4913 4367 3951 3712 3917 3415 * * 14 0 * * * * * * 6360 0 0 C 15 * 104 * * * 5898 * * * * * * * * * 5646 * * * 4934 15 12 6929 * 1000 1000 * * 6360 1000 0 D 16 5161 * 3795 3141 * 3757 5398 6374 3345 5821 * 2907 3463 4395 4087 3114 3698 4724 * * 16 0 * * * * * * 6360 0 0 E 17 5467 * 4848 2256 3254 6929 3936 3053 4710 4379 5662 6481 * 3342 6855 6750 4836 3266 * 4017 17 29 5663 * 1000 1000 * * 6360 1553 0 C 18 * 139 * 5495 * * * * * * * * * * * 5837 * * 5828 4850 18 0 * * * * * * 6360 0 0 G 19 6482 * 3708 2957 * 1432 4341 * 5211 * * 4522 3693 5317 3885 3840 5023 * 6013 7223 19 0 * * * * * * 6360 0 0 K 20 6035 5495 * 4727 5269 5770 5565 5555 1267 5618 6394 6050 * 3856 2856 5552 * 6768 5771 3065 20 0 * * * * * * 6360 0 0 N 21 2235 6467 4209 6159 6607 3718 6862 5898 4740 5914 * 5858 5045 5424 3436 2303 3028 4204 * * 21 10 * 7153 * * * * 6360 0 0 F 22 4185 5704 * * 548 6436 * 6190 * 5083 * * * * * 4297 4214 * 5492 4060 22 0 * * * * 0 * 6362 0 1000 C 23 2651 6900 5711 * 5444 6005 6980 3994 3300 6752 * 3963 4896 6433 3927 2518 2560 4788 6049 5447 23 0 * * * * * * 6360 0 0 Y 24 6858 6596 4808 6987 4451 5646 3718 * 4821 4553 * 5120 * 2889 2700 2657 3931 5031 4553 3281 24 0 * * * * * * 6360 0 0 I 25 5317 7164 * 6493 6769 6851 4577 5989 1876 4985 6699 5281 3717 3817 3562 2233 4688 5110 * 5063 25 0 * * * * * * 6360 0 0 S 26 3879 3852 4344 3992 * 3371 5129 5271 5070 * * 4299 * 5103 4787 1381 5865 * 5901 4799 26 0 * * * * * * 6360 0 0 A 27 4192 * 3852 4481 * 5254 2700 4771 4121 3895 * 3042 * 4778 5478 2797 4398 4450 * 3786 27 0 * * * * * * 6360 0 0 L 28 * 4955 * * 3419 * * 4673 * 678 3706 * * 5495 4963 * * 4714 6192 5198 28 0 * * * * * * 6360 0 0 R 29 3975 * 4714 6394 * * 4974 4528 2303 5748 5586 3644 * 3727 3232 3747 3026 3755 5804 5796 29 32 5495 * 1000 1000 * * 6360 1000 0 I 30 3792 6050 4628 4443 * 5551 6433 4508 3833 3737 6817 4221 * 3237 2373 3964 4680 3650 6481 4358 30 0 * * * * * * 6360 0 0 H 31 * 6002 * * * * 165 * * 5898 * * * 4799 5353 * * * * 6013 31 0 * * * * * * 6360 0 0 Q 32 7146 5586 * 2877 5662 * 5893 3313 3577 3475 2474 * 6050 2660 4254 6049 5193 3900 * 6642 32 26 5822 * 0 * * * 6360 1590 0 R 33 6161 * * 6443 6001 5215 * 4591 2583 3475 4397 5837 * 6692 1187 4775 5828 4459 * 5631 33 0 * * * * * * 6360 0 0 V 34 6529 6397 * * * 5692 * 1631 4126 3498 5131 4783 * 6325 3910 4342 2256 3738 * 6398 34 40 5184 * 0 * * * 6152 2202 0 H 35 * * * * * * 173 * * * * * 5610 6022 6300 * * * * 3955 35 0 * * * * * * 6152 0 0 M 36 4530 * 6470 6397 6866 6022 5787 6715 6396 5345 3929 5782 * 6476 4630 2567 930 5917 * * 36 0 * * * * * * 6157 0 0 G 37 6454 6018 4119 3727 6389 887 * * 3708 * * 4147 6455 4903 4483 4512 6391 6764 * * 37 0 * * * * * * 6149 0 0 E 38 4512 * 3529 859 * 7002 * 4754 3857 5358 5661 5598 6425 4474 5186 6633 6878 4764 * * 38 40 5181 * 1585 585 * * 6151 1942 0 K 39 * * * 6328 * * * * 722 6489 * * 6139 5354 1594 * * * * * 39 67 4457 * 1585 585 * * 6118 1000 0 C 40 2177 2248 4409 * 2922 * 4418 * * 2727 * * 2857 4223 * * * * * * 40 0 * * * * * * 4569 0 0 S 41 3212 * 4194 * 3284 * 4350 * 4062 * * 3990 3360 * * 1969 3226 * * 3275 41 0 * * * * * * 4476 0 0 G 42 * 1319 * * 4186 1201 * * * * * * * * * * * 4169 4224 * 42 0 * * * * * * 4438 0 0 P 43 * 2911 3586 3615 * * * * * * * * 695 * * 3565 * * * * 43 0 * * * * * * 4137 0 0 S 44 3964 * * 2600 * 2866 3795 * * * * * * 3700 * 1919 2182 * * * 44 0 * * * * * * 4137 0 0 S 45 3094 610 * * * * * * * * * * * * * 2136 * * * * 45 0 * * * * * * 3587 0 0 G 46 * * * * * 0 * * * * * * * * * * * * * * 46 0 * * 0 * * * 3038 0 0 //