HHsearch 1.5 NAME c2elzA_ FAM FILE c2elzA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2elzA_.a3m DATE Sat Mar 13 15:04:10 2010 LENG 46 match states, 46 columns in multiple alignment FILT 117 out of 10934 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.5110 2.5881 SEQ >ss_dssp CCCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC >sa_dssp EEEEEEEEDEDEDEBEEDDDBCEEEECBEDBDEEDEDEEEEEEEEE >ss_pred CCCCCCCCCCCCEECCCCCCEECCCCCCEEEEEECCCCCCCCCCCC >ss_conf 9878778776837737478621014677012762166278878888 >Consensus gxxgxsxsxEKPyxCxxCxkxFxxxsxLxxHxrxHTgeKxxgxxxx >c2elzA_ GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG >UniRef50_Q9JIC0(250-291:545) KRAB zinc finger protein n=12 Tax=Murinae RepID=Q9JIC0_MOUSE E=0.0005 s/c=1.08 id=31% cov=78% ---GRSNTTEKNYEYNQWGKAFSYPSYLQVHETIHTGK-------- >UniRef50_UPI000180CFB8(376-419:499) PREDICTED: similar to growth factor independent 1 n=1 Tax=Ciona intestinalis RepID=UPI000180CFB8 E=2e-05 s/c=1.14 id=28% cov=87% GQHKASHNREKVFECHICHKTFKRSSTLSTHLLIHSDTR------- >UniRef50_UPI0000EB45E0(442-483:564) UPI0000EB45E0 related cluster n=1 Tax=Canis lupus familiaris RepID=UPI0000EB45E0 E=0.0004 s/c=1.09 id=29% cov=67% ---------KRPFTSTEGGKSFHGSSSLAHHWRTHTGEQ------- >UniRef50_UPI000194DE87(284-327:583) PREDICTED: similar to zinc finger protein 131 n=1 Tax=Taeniopygia guttata RepID=UPI000194DE87 E=9e-05 s/c=1.09 id=30% cov=87% GASKKQRPGKKIHVCQYCDKQFDHFGHFKEHLRKHTGEK------- >UniRef50_C3YP36(259-299:469) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3YP36_BRAFL E=0.0003 s/c=1.12 id=28% cov=70% ---------DKPFMCGVCGHRAAQKAAISQHMKTHGAEKS------ >UniRef50_Q1RLG1(18-51:939) Zinc finger protein (Fragment) n=2 Tax=Ciona intestinalis RepID=Q1RLG1_CIOIN E=0.0002 s/c=1.39 id=30% cov=65% ----------KMYWCRLCNYASFEKSTIMRHQRTHTGLR------- >UniRef50_C7YME1(358-401:453) Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YME1_NECH7 E=0.0002 s/c=1.06 id=30% cov=87% GHAQPAPQSERPFKCDQCVQSFSRNHDLKRHKRIHLAVK------- >UniRef50_B0XIJ0(174-215:679) Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0XIJ0_CULQU E=0.001 s/c=1.06 id=31% cov=78% ---------ERPYPCPHCPKRFHTVTNQLAHINTHTKARVFGCS-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 2573 * * * * 265 * * * * * * * * * * * * * * 1 0 * * * * * * 3601 0 0 S 2 2338 * * * * * 3134 * 2413 * * * * 4217 * 1163 * * * * 2 0 * * * * * * 4337 0 0 S 3 * * * * * 4165 1750 * * * * 3671 * 3331 4395 1577 3533 * * * 3 0 * * * * * * 4558 0 0 G 4 * * 4850 * * 716 * * 3407 5113 4878 3884 * 2926 * * * * * * 4 0 * * * * * * 4785 0 0 S 5 3214 * * 3636 * 3415 * * 4187 4152 * 4416 5438 * 3208 1638 3916 4603 * * 5 0 * * * * * * 5095 0 0 S 6 2601 4607 5208 * * 5588 * 5498 * * 5454 * 3833 4578 * 1416 2506 4701 * * 6 0 * * * * * * 5141 0 0 G 7 6011 * 5703 * 5883 4049 1214 * * * * 2769 3331 5588 3968 3811 4188 * * * 7 0 * * * * * * 5141 0 0 S 8 2302 * * 4749 * * * * * * * 5772 3925 5140 * 1488 1903 5395 * * 8 17 6387 * 1000 1000 * * 5443 1000 0 V 9 3018 * 6113 3366 * 2263 6090 5381 3620 3855 6090 4994 6407 5879 4333 5325 3453 3376 6111 5946 9 0 * * * * * * 5485 0 0 E 10 5735 * 2930 603 * * 6367 * 3735 * * 5825 5178 4083 * * * * * * 10 17 6440 * 1807 486 * * 5932 1549 0 K 11 6588 * * * * 5561 6793 * 798 6731 6847 4171 6799 6198 1850 * 6539 * * * 11 0 * * * * * * 5957 0 0 P 12 * 6801 * 6650 * 6561 5334 5930 4377 5815 6393 4805 606 6143 4926 4188 4572 6061 * * 12 8 7429 * 1585 585 * * 5957 1000 0 Y 13 * 6206 5879 * 1664 * 2925 * * 5118 * 5571 * * 4817 * * * * 1194 13 0 * * * * * * 5963 0 0 K 14 4113 * * 3053 6731 7073 3973 5598 2274 5381 6964 5413 4892 4051 3467 4528 3291 3198 6405 7039 14 0 * * * * * * 5963 0 0 C 15 * 137 * * 4825 * * * * * * * * * * 5618 * * * 4848 15 0 * * * * * * 5963 0 0 E 16 4338 * 2604 3007 6506 4297 4329 * 3738 6760 7076 3286 3361 4178 4293 3543 4297 5987 * * 16 0 * * * * * * 5963 0 0 D 17 5402 * 4357 2201 4388 * 3670 2918 4189 3869 * * * 2833 6983 * 6137 3145 * 4247 17 11 7063 * 1000 1000 * * 5963 1000 0 C 18 * 111 * * 6199 * * * * * * * * * * 5838 * * 5857 5276 18 0 * * * * * * 5963 0 0 G 19 5021 7152 3514 3842 * 1260 5916 * 5021 * * 3159 3820 5031 4213 4346 6596 * * 6248 19 0 * * * * * * 5963 0 0 K 20 5600 * * 5949 4886 6730 6115 6495 1015 6342 4378 6909 * 4169 3127 7076 5578 5341 * 3215 20 0 * * * * * * 5963 0 0 G 21 2432 6942 * * * 3280 * 4763 5418 * 6916 6649 * 6023 2370 2515 2663 3771 6618 * 21 0 * * * * * * 5963 0 0 Y 22 4482 4929 * * 529 * * * 6489 4568 * * * * * 5173 4144 5571 * 3820 22 0 * * * * * * 5963 0 0 N 23 2958 7142 5684 5307 4886 6010 5396 5919 3634 4680 5948 3512 6037 5540 2812 2808 3306 4555 * 4612 23 10 7138 * 0 * * * 5963 1000 0 R 24 4976 7437 3788 5755 * 5618 3378 7019 4236 5073 6966 4547 * 2699 2447 3364 3601 * 4493 4250 24 0 * * * * * * 5963 0 0 R 25 3499 * * 4225 6715 5522 4867 5732 2059 4031 5928 5694 4039 4646 3558 2754 4658 4530 6559 6730 25 0 * * * * * * 5963 0 0 L 26 3237 7444 4812 4813 5020 3848 5997 6248 5169 7105 * 3976 6783 5101 4665 1411 4295 5056 7217 4384 26 0 * * * * * * 5963 0 0 N 27 3703 5829 4267 4553 * 4429 2646 7223 4058 5389 * 2854 * 5589 4487 2698 3648 5219 * 4326 27 0 * * * * * * 5963 0 0 L 28 * 4881 * * 3764 * 5879 4543 * 640 4742 * * 6648 4069 * * 4959 * 4266 28 0 * * * * * * 5963 0 0 D 29 3902 * 4776 5182 * 6607 5264 4438 2549 5348 5635 3910 * 3712 2706 3813 2839 4496 6730 6583 29 0 * * * * * * 5963 0 0 M 30 4063 * 6854 3443 5925 5354 5080 4586 2850 4879 6021 4976 * 3237 2135 4444 4277 3936 * 6506 30 0 * * * * * * 5963 0 0 H 31 * * * * * * 102 * * 5276 * * * * * * * * * 4561 31 32 5499 * 0 * * * 5963 1919 0 Q 32 * * * 2976 5302 * 6021 4675 3420 3511 2045 6813 * 2754 3632 7063 4508 4076 5571 * 32 0 * * * * * * 5963 0 0 R 33 5056 * 6631 5965 7177 5717 6054 5251 3358 3460 5471 5434 6159 5340 982 4783 5857 6113 7049 5502 33 0 * * * * * * 5963 0 0 V 34 5486 5006 * * 6883 * * 2114 4681 3891 5004 6248 * 6121 5007 3411 1771 3134 6656 * 34 20 6206 * 0 * * * 5963 1000 0 H 35 * * * * * * 135 * * 5302 * * * 6226 5571 * * * * 5067 35 9 * 7375 * * * * 5963 0 0 M 36 4285 * * 5891 * 5682 6970 6618 5359 4863 4923 5012 * * 5296 2538 850 5697 * * 36 11 7106 * 0 * 0 * 5957 1000 1000 G 37 4718 * 3613 3151 * 977 * * 3798 6706 6773 4034 6886 5692 5092 4884 7081 * 6712 * 37 0 * * * * * * 5958 0 0 E 38 4727 6831 3186 1015 * 5835 6624 * 3683 4813 6727 5986 * 3451 5557 * 6063 4460 * 6732 38 0 * * * * * * 5798 0 0 K 39 * * 6607 * * * * * 891 6491 6161 * * 5269 1470 4698 * * * * 39 0 * * * * * * 5769 0 0 T 40 3033 * * * * * * * * * * 3609 1943 * 3844 1878 2720 4561 * * 40 86 4108 * 0 * * * 4733 1000 0 S 41 * * * * 1614 * 3851 * * 4088 * * * * * 1809 3653 * * 2473 41 0 * * * * * * 4176 0 0 G 42 4009 2725 * 3855 * 601 * * * * * * 4099 * * * * * * * 42 0 * * * * * * 4049 0 0 P 43 * 1860 * * * * * * * * * * 465 * * * * * * * 43 0 * * * * * * 3206 0 0 S 44 * * * 2749 * * * * * * * 2715 3021 * * 797 * * * * 44 0 * * * * * * 3033 0 0 S 45 * 2236 * 2197 * * * * * * * * * * * 1457 2284 * * * 45 0 * * * * * * 2528 0 0 G 46 * * * * * 0 * * * * * * * * * * * * * * 46 0 * * 0 * * * 1955 0 0 //