HHsearch 1.5 NAME c2drpD_ FAM FILE c2drpD_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2drpD_.a3m DATE Thu Mar 11 22:59:30 2010 LENG 65 match states, 65 columns in multiple alignment FILT 106 out of 17042 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.0 EVD 0.5588 2.2736 SEQ >ss_dssp CEEEEETTEEEETTTCCEESSHHHHHHHHHHHTCSSCCCEECTTTCCEESSHHHHHHHHHHHCC- >sa_dssp ECEDDDEECBDACEDEEDCEDDECADDBDEDDCDEEEEDCDAEEDEEECECEDDCDDBCEEEDD- >ss_pred CCEECCCCCEECCCCCCEECCHHHCCCCCEEEECCCCCEEECCCCCCEECCHHHHHHHHHHEECC >ss_conf 92326887788744788880464563101377416311373376787672667854322212119 >Consensus extHxxekxxxCxxCxkxfxxxxxlxxHxxxxhxxxxxxxxCxxCxxxfxxxxxLxxHxxxxHxi >c2drpD_ EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI >UniRef50_Q8N554(515-579:614) Zinc finger protein 276 n=28 Tax=Euteleostomi RepID=ZN276_HUMAN E=0.0001 s/c=0.73 id=17% cov=102% QMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCGRRFEKAHNLNVHMSMVHPL >UniRef50_B4N998(158-222:544) GK11585 n=1 Tax=Drosophila willistoni RepID=B4N998_DROWI E=3e-05 s/c=0.76 id=23% cov=95% EKCHSDAKIYECQKCGHAYTDNENFQRHCckdSIADSSSRQAHRCSLCGKCLKSPSSLVMHMRL---- >UniRef50_UPI0001926101(467-540:830) PREDICTED: similar to zinc finger protein 59 n=1 Tax=Hydra magnipapillata RepID=UPI0001926101 E=2e-06 s/c=0.72 id=22% cov=100% -LRHCGVRDFPCNHCDQKFKRKAHLLRHQQDRHPAEPRERKkrevrinstvCGLCRKTFKYKTVLIKHMVAQHGI >UniRef50_C1N290(110-175:210) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N290_9CHLO E=5e-07 s/c=0.84 id=21% cov=97% -MTHTTSRPHACPHegCGKAFKTEKAVASHART--HTGEKPYRCTFgaCERAFSSQGEFSRHRIKTHGV >UniRef50_A8X3M6(84-141:323) Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=A8X3M6_CAEBR E=4e-06 s/c=0.91 id=18% cov=88% ---------HKCDFCEETFQNSYLLKRHIWIHWDNKNQPFPCvlKGCHMHCPTILSLKSHLKYTHRL >UniRef50_A8XK12(1804-1861:2228) C. briggsae CBR-SPR-3 protein n=2 Tax=Caenorhabditis briggsae RepID=A8XK12_CAEBR E=6e-05 s/c=0.84 id=23% cov=82% ---------FLCSQCPYVNSDISSLQRHFRHHMHEFRRTWSCTQCSYSSYHFADVYKHVKL---- >UniRef50_Q1RLD6(465-531:793) Zinc finger protein (Fragment) n=1 Tax=Ciona intestinalis RepID=Q1RLD6_CIOIN E=0.0002 s/c=0.70 id=22% cov=100% -LIRSGKKVFQCGECEKVFLSTHSRSSHVRTVHRGIRALYCCPYCTSvpiKYAKRITLVKHLLKVHDI # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 788 * * * * 2956 * * * * 1775 * * * * * * 1 0 * * * * * * 5629 0 0 F 2 5372 * * * 2560 * 5405 3324 5286 1642 3840 * * 5359 3760 * * 3796 * 3371 2 0 * * * * * * 6971 0 0 T 3 * 6007 5909 * * * 4997 4870 * 5905 6295 4544 * * 3962 2466 1115 3236 * 5885 3 0 * * * * * * 7586 0 0 K 4 * 6342 6184 5437 * 6150 472 * 3612 * * * * 5678 3653 4834 * * * * 4 20 6201 * 1000 1000 * * 7869 1000 0 E 5 4342 5469 4300 3287 6402 * * * 4166 6562 6634 3882 5317 3617 3561 2535 1971 * * * 5 0 * * * * * * 7920 0 0 G 6 5734 * 3742 4126 * 1495 4608 * 3596 6473 6320 3806 3886 4907 * 3093 5186 5067 * * 6 0 * * * * * * 8085 0 0 E 7 5185 * 3364 1365 6638 6531 5274 5585 4192 5642 * 4423 4798 3470 5000 3616 5332 5373 * 6609 7 15 6634 * 1000 1000 * * 8140 1000 0 H 8 6211 * 6673 5134 6390 3881 6642 * 1392 5623 * 3820 5806 4742 2050 4180 4866 * * * 8 28 * 5724 * * * * 8140 0 0 T 9 5312 * 4612 * 6631 6213 * 4721 3642 4210 6480 6478 1570 4661 4145 3147 3311 3849 * * 9 0 * * * * 0 * 8103 0 1667 Y 10 * 5065 * * 1653 * 3260 4077 * 4761 * 6098 * 5675 5849 * 6276 5171 5715 1555 10 0 * * * * * * 8167 0 0 R 11 3166 6697 * 3656 5201 6715 5442 6610 2146 5007 6651 6623 4500 2882 3957 4588 4791 3086 6284 * 11 27 6944 6625 2322 322 * * 8184 1000 0 C 12 * 77 * * 5873 * * * * 5634 * * * * * * * * 6113 * 12 17 6451 * 1000 1000 * 0 8206 1000 1000 K 13 5566 * 2873 3021 * 4639 4126 6464 3153 5826 * 3180 3346 4298 4901 3654 3633 5860 * 6626 13 0 * * * * 0 * 8206 0 1000 V 14 6215 * 5318 2863 3624 * 3366 2940 3806 3773 7028 * * 2991 6713 6299 4565 3575 * 3488 14 52 4826 * 1000 1000 * * 8209 2567 0 C 15 6215 74 * * 5667 * * * * 5864 * * * * * * * * * * 15 17 6453 * 1585 585 * * 8209 1000 0 S 16 4863 6627 3369 3991 5540 1619 5397 * 4598 6650 * 3652 4038 5232 5799 3147 4302 * * 5306 16 14 * 6712 * * * * 8209 0 0 R 17 4203 * * 3907 5187 6723 5605 6590 1208 5384 5969 * * 4662 2940 * 5619 5850 6281 3083 17 20 6211 * 1000 1000 0 * 8198 1000 1000 V 18 2555 4034 * 5196 6433 4365 6513 6745 3272 6799 5688 5723 5989 4714 3736 3098 2622 3924 5455 6215 18 0 * * * * * * 8209 0 0 Y 19 5222 4664 * * 749 * 6595 6561 * 4672 6766 6538 * * * 5053 4585 6630 * 2502 19 0 * * * * * * 8209 0 0 T 20 2874 * 6284 5006 * 6954 5663 5281 2670 4625 * 4481 5296 4749 3126 2884 3015 4294 * 4780 20 0 * * * * * * 8209 0 0 H 21 6650 * 3065 5790 6766 * 3895 5953 4330 4488 6809 3260 * 3697 2813 3040 2648 6623 6821 4928 21 0 * * * * * * 8209 0 0 I 22 3147 5700 5524 4134 * * 5406 5665 1947 4455 5912 4443 5364 3815 3147 3232 4415 5893 * * 22 0 * * * * * * 8209 0 0 S 23 3242 * 4023 4275 4986 4127 5135 6518 3677 4990 6701 3975 4565 4479 5300 2176 3770 5884 * 4438 23 13 * 6750 * * * * 8209 0 0 N 24 4009 * 3020 4492 7015 4799 3171 5884 5827 3800 5772 3184 * 4365 4946 3023 4083 4379 * 3843 24 14 * 6646 * * 0 * 8206 0 1000 F 25 * * * * 2960 * 6116 5333 5725 718 4626 * * * 4562 5111 * 6707 4300 4909 25 29 5638 * 0 * 0 * 8206 1000 1000 C 26 4070 5638 4492 4436 * 6497 5866 3913 2961 3744 5477 4300 * 2959 2652 5186 4600 3893 * 4834 26 37 6492 6117 1000 1000 * * 8209 1000 0 R 27 4685 6947 6920 3980 * 5471 6626 4735 3206 4059 5672 4344 * 4135 1599 3693 5173 4164 * 5255 27 0 * * * * * 0 8193 0 1000 H 28 6734 * * * * * 122 6745 6470 * * * * * 5550 * 6482 * * 5773 28 66 5097 5991 1711 526 0 * 8193 2291 1000 Y 29 4672 5872 * 3024 4349 * 4481 2914 5732 2986 3073 5967 * 4104 4305 5655 * 3502 5088 3877 29 51 5711 5979 1058 944 0 * 8210 1780 1717 V 30 5183 * 5249 5854 * 5053 6471 3534 2717 3456 4539 4010 6724 3423 1938 4823 5136 6775 * 5943 30 39 * 5242 * * * 0 8197 0 1270 T 31 5416 6411 5538 3943 6683 * 5118 3671 3109 5665 6767 3593 * 4283 3694 3144 2555 3490 6042 5835 31 177 5899 3343 622 1513 456 1885 8142 1659 2353 S 32 4182 5807 6202 4197 4886 6356 1591 5101 4333 3551 6405 4531 * 5753 4442 4121 5340 3537 * 5109 32 70 6721 4732 3907 100 3468 137 8126 1000 4681 H 33 4960 4207 5523 6514 * 4935 1179 4837 5096 4963 4879 4549 * 4277 4910 4756 3898 6480 6581 5427 33 133 3510 * 3511 132 135 3487 8104 3674 5002 K 34 4863 * 4051 4137 * 4317 1865 * 3564 5211 5698 4025 4734 4524 3802 3708 3844 6083 * 5808 34 81 4201 * 2498 281 0 * 8185 3461 1000 R 35 4535 * 5629 3475 * 3040 * 4382 2834 5737 5268 4111 3929 4651 3692 3091 3353 5269 * 6581 35 53 7062 5140 1000 1000 * * 8209 1000 0 N 36 4747 * 4475 2508 6517 2274 5062 5319 3412 4582 6603 4340 6843 4226 4715 3568 5182 4971 * 5059 36 72 4643 6811 2770 229 0 * 8169 2625 2286 V 37 3496 * 4036 2501 6484 4873 5329 3947 3238 5310 6817 3817 4622 3801 3781 4884 4907 4560 6446 5532 37 84 5191 5100 1703 529 0 * 8208 2289 1000 K 38 3971 6695 * 5060 5086 5205 5246 5649 1493 4578 5427 5490 4536 5114 2515 5355 6558 5838 5541 5049 38 42 5137 * 3374 146 594 1567 8182 2169 2200 V 39 4790 5910 5820 4350 * 4669 4767 5672 3085 3816 5029 4889 1835 5823 3761 3740 4736 4741 * 6626 39 47 6690 5492 3170 170 0 * 8192 1000 1000 Y 40 * 4268 * * 1820 5823 3196 4176 * 4510 * 6000 6426 * 5695 * * 4706 4777 1655 40 24 5900 * 1000 1000 0 * 8175 1719 1761 P 41 3351 6602 6635 3783 6609 * 4501 4330 2285 4086 5866 5222 3986 3864 3273 3828 4761 4491 * 6676 41 14 6671 * 3322 152 * * 8209 1000 0 C 42 * 114 * 6493 * * * * * * * * * 6552 5922 5833 * 5629 * * 42 37 5318 * 1000 1000 * * 8209 2070 0 P 43 4790 * 3126 2933 5758 3829 5170 * 4395 5484 * 4162 2194 5085 4166 3413 4088 * * 5671 43 0 * * * * * * 8209 0 0 F 44 5787 * 4320 3307 3302 5032 3470 3330 4560 3027 5309 6633 6470 4218 5833 * 6067 2905 * 3685 44 41 5143 * 1000 1000 * * 8209 2112 0 C 45 * 50 * 5922 * * * * * * * * * * 5833 * * * * * 45 0 * * * * * * 8209 0 0 F 46 5798 * 3106 3730 4946 2209 4311 * 4098 4775 * 3034 3737 6740 5806 2695 5814 * * * 46 0 * * * * * * 8209 0 0 K 47 4140 * 6497 4215 4508 6285 5046 5828 1670 4727 4325 5893 * 3930 2987 5770 5545 5376 * 3331 47 26 5814 * 1340 725 * * 8209 1675 0 E 48 3578 6724 5304 4049 * 3607 * 5591 3002 5316 4555 6635 * 4914 3030 2786 2947 3941 * 5622 48 0 * * * * * * 8209 0 0 F 49 5269 3341 * * 842 6713 * * * 5173 * * * * * 4098 4329 6658 * 2623 49 0 * * * * * * 8209 0 0 T 50 3536 5468 * 5152 5301 6836 5214 4601 3738 4812 3886 4930 4934 6609 3161 2558 3206 4425 6299 4115 50 0 * * * * * * 8209 0 0 R 51 6292 7039 4644 4458 5575 5525 4267 * 5146 5915 6709 4165 * 3091 2206 2640 3083 * 5334 4266 51 0 * * * * * * 8209 0 0 K 52 3503 6941 6740 4394 6542 6742 5228 7204 2491 4829 6772 4195 3402 3592 2753 3388 6815 5857 * 3858 52 0 * * * * * * 8209 0 0 D 53 3996 7088 3118 4397 * 4311 4618 6602 3552 6632 * 3781 5281 3851 3908 2297 3631 6900 * 4517 53 0 * * * * * * 8209 0 0 N 54 4269 * 3910 4830 5028 5836 2818 5261 4600 4649 6951 2637 * 4424 4673 2420 3601 6671 * 6002 54 0 * * * * * * 8209 0 0 M 55 6614 * * * 3946 * * 6635 6851 663 3886 * * * 4233 * * 3751 * 3650 55 0 * * * * * * 8209 0 0 T 56 4472 * * 4287 6319 6920 5641 5312 2568 3873 5218 2937 * 3784 3358 3531 3640 3791 6891 5269 56 0 * * * * * * 8209 0 0 A 57 4833 * 4752 4171 6814 6891 6815 4607 3395 4318 5073 4097 * 2535 2734 3970 4020 3353 * 5287 57 0 * * * * * * 8209 0 0 H 58 * * * * * * 0 * * * * * * * * * * * * * 58 25 7119 6688 1585 585 * * 8209 1000 0 V 59 4518 4777 * 4432 6273 * 6272 2529 3848 2427 2595 6434 * 3842 5623 * 5753 3159 * 5554 59 39 * 5229 * * 0 * 8178 0 1000 K 60 4518 6525 * 3975 * 6608 6605 * 1822 4752 5124 5108 * 2947 1769 4806 * 5325 * * 60 0 * * * * 0 * 8132 0 2203 I 61 3788 5690 5819 4597 * * 5820 3607 3714 3297 5797 3769 * 6496 3138 3342 2605 3992 * 5074 61 0 * * * * * * 8132 0 0 I 62 5449 * 5216 4109 5084 * 3126 4347 2824 5446 4034 * * 3761 3348 5218 3765 2758 5910 4752 62 17 6388 * 0 * * * 7752 1000 0 H 63 * * * * * * 56 * * * * * * * 5806 5624 * * * * 63 0 * * * * * * 7750 0 0 K 64 * * 4434 3405 * 3908 5319 * 1718 * * 4629 5363 3601 2947 2595 5544 * * * 64 0 * * * * * * 7197 0 0 I 65 * * * * * * * 1588 * 1901 3075 * * * * * * 1832 * * 65 0 * * 0 * * * 5957 0 0 //