HHsearch 1.5 NAME c2dmoA_ FAM FILE c2dmoA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2dmoA_.a3m DATE Fri Mar 12 20:55:56 2010 LENG 68 match states, 68 columns in multiple alignment FILT 124 out of 2712 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4274 0.0241 SEQ >ss_dssp CCSCCCSEEEEECSSCCCCSSSSCCCCTTCEEEECEECSSSCEEEEETTEEEEECSTTEEECCCSCCC >sa_dssp EEEDEEDECBDBDEDDEBEEEDBCECEDDCEACBDEEEEEECACACCEEEEACABCEDBCEDEEEEEE >ss_pred CCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCEEEECCCCCCC >ss_conf 97888988699962206888867528079969999954799799997992899960138996898779 >Consensus GxxxxxxxxxxalxdyxxxxxxeLsxxxGdxixvxxxxxxxWxxxxxxgxxGxxPxxyvxxixxxxsG >c2dmoA_ GSSGSSGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSGPSSG >UniRef50_Q45FX5(923-995:1007) Protein vav-1 n=5 Tax=Caenorhabditis RepID=VAV_CAEEL E=2e-07 s/c=0.78 id=21% cov=100% -NPYSQCKVFKAVHDYDapsPNNEGKfLSFKTGDIVVLLDtvGEDRGWWKGQVNNKSGFFPLSYVKPYDPATEG >UniRef50_UPI0001926557(249-304:513) PREDICTED: similar to Rho/Cdc42/Rac GTPase-activating protein RICS n=1 Tax=Hydra magnipapillata RepID=UPI0001926557 E=3e-07 s/c=1.01 id=17% cov=79% ----------RVIKRYQSQAPDEMTLDVGEFISIIDMphvDETVWWRGKKGFEVGFFPSNCIEVLG----- >UniRef50_C5DL17(6-67:888) KLTH0F09240p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DL17_LACTC E=5e-07 s/c=0.90 id=22% cov=75% ---------VKAHYSWSGETKNDLGFLENDVIQVT-KIKGNWFYGTLlrnSKKYGYFPTNFVT-------- >UniRef50_UPI0000E480B0(1041-1106:1107) PREDICTED: similar to NADPH oxidase cytosolic protein p67phox n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E480B0 E=1e-05 s/c=0.78 id=23% cov=96% -GPSKPGQRKTALviASHETDVEGEVSVSEGDLITITGEVGD-WLEVEVKGRKGRVPRSCVKDFSKPR-- >UniRef50_B7P1I5(452-515:1521) Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7P1I5_IXOSC E=0.0002 s/c=0.73 id=21% cov=91% ------GTTCVCVTEYQSPLTGHLALNCGDIVQVTEVTDTGMLEGRtRDGRQGMFPSAAIQEVKlrGPST- >UniRef50_O13736(79-142:1420) Actin cytoskeleton-regulatory complex protein sla1 n=1 Tax=Schizosaccharomyces pombe RepID=SLA1_SCHPO E=6e-09 s/c=0.97 id=20% cov=96% ---AEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSDWILVGFNNNFGLAPRNYVEGMDASSA- >UniRef50_UPI00017605FF(340-402:873) PREDICTED: similar to SH3 and PX domain-containing protein 2A n=3 Tax=Danio rerio RepID=UPI00017605FF E=3e-05 s/c=0.79 id=19% cov=94% --PTVEAEYYT-IAEFRSCLTDGISFSGGQRADVIEKNSGGWWYVQIGEKEGWAPCSYIDKRKKPT-- >UniRef50_UPI00003BF9C1(525-588:880) PREDICTED: similar to EPS (human endocytosis) related family member (eps-8) n=2 Tax=Apocrita RepID=UPI00003BF9C1 E=3e-05 s/c=0.77 id=22% cov=87% ---------VQVTYPRTANNDKELTVVRGEYLEILDDSRKWWKARNSRGQVAHVPHTIVTPHNPSHS- >UniRef50_P39969(39-110:1040) Protein BOI2 n=5 Tax=Saccharomyces cerevisiae RepID=BOI2_YEAST E=1e-05 s/c=0.71 id=18% cov=100% GRDGGNFPMYIAINEYFKRMEDELDMKPGDKIKVItddEEYKDGWYFGRnlRTNEEGLYPVVFTQKITVEKA- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4932 0 0 S 2 3546 * 5133 5427 * 2552 * 5117 * * 5370 1660 * * 4905 2090 4200 * * * 2 0 * * * * * * 5869 0 0 S 3 3833 * 5619 3561 * 5935 * * 5766 6034 * 4741 1125 5950 5042 2706 4487 5719 * 6000 3 0 * * * * * * 6412 0 0 G 4 1746 * 4817 4629 5932 2921 5350 * 4916 * * 3233 4544 4697 5912 3043 3848 6450 * 6219 4 23 5978 * 0 * * * 6568 1000 0 S 5 4292 * 4558 3622 * 2356 6409 5466 3710 6327 5759 6283 5834 4534 4830 1878 6370 4339 * 4445 5 17 * 6380 * * * * 6656 0 0 S 6 5208 6256 5624 5169 * 4102 6655 * 3711 * 5239 3572 1917 3595 3516 2489 5313 5760 * * 6 10 7140 * 1000 1000 0 * 6741 1000 1000 G 7 3552 6779 6211 5201 4674 1485 * 5084 4255 4674 * 5082 4314 4437 6309 3283 4019 5770 * 5248 7 17 6398 * 0 * * * 6805 1000 0 E 8 6791 7029 5535 2846 5325 6441 7103 7024 4127 4250 6745 4403 2487 2868 4243 3909 3464 3653 * * 8 0 * * * * * * 6841 0 0 A 9 5006 * * 4356 3306 * 5759 4297 4030 3321 4965 * 4962 3717 3371 6005 3556 3106 * 2891 9 11 * 7065 * * * * 6894 0 0 H 10 2802 3243 * * 4247 4670 4387 * 6775 3017 4778 * * * * * * 2154 6553 2274 10 59 5096 6528 1435 666 0 * 6896 1699 1000 R 11 6735 6782 * 5117 7352 * * 4048 2625 4964 5472 * * 3332 1687 6298 3847 2555 * 7128 11 51 5437 6444 1210 817 0 * 6818 2129 1000 V 12 717 4505 * * * * * * * * * * 6480 * * 5043 6190 1773 * * 12 23 5989 * 2177 361 0 * 6844 1682 1000 L 13 5813 * * * * * 5008 2752 3769 1414 4372 * * 5483 6110 4742 4334 2546 * 6535 13 43 5101 * 1000 1000 * * 6876 2303 0 F 14 3889 6026 6680 4742 2892 * 3560 6833 3872 6931 5691 5725 * 6042 6580 * 4244 7038 5025 1285 14 0 * * * * * * 6876 0 0 G 15 4067 * 1114 3453 * 5459 6722 * 5230 * * 3704 3427 6734 * 3110 4911 * * * 15 0 * * * * * * 6876 0 0 F 16 * 6764 * * 1230 * 4377 * * 6309 * * * * * * * * 4615 1111 16 15 6635 * 2000 415 * * 6872 1000 0 V 17 4811 5292 3248 3582 6707 * 7315 4693 3633 5274 4980 3441 6827 3586 4212 4231 2757 3581 6315 5504 17 30 5620 * 1282 764 * * 6872 1665 0 P 18 1412 * * 7066 * 3372 * * 4614 * 6140 6324 2021 5515 6838 2982 4871 * * 6075 18 9 7355 * 1000 1000 * * 6878 1000 0 E 19 4155 5692 3506 2762 * 5521 5924 6950 3730 * 6065 4341 6468 2864 3050 3594 3029 5140 * * 19 69 4425 * 1868 462 * * 6859 2607 0 T 20 5175 * 2686 3278 * 3217 4073 * 4605 4776 6703 3375 5467 3895 4282 3522 3824 4632 6067 6760 20 10 * 7220 * * * * 6864 0 0 K 21 4592 * 2488 2366 6850 4872 6478 5791 3847 * * 5029 2362 4574 6583 3310 4114 6854 * * 21 52 4819 * 730 1332 * 0 6862 2192 1000 E 22 5182 6236 1410 3144 * 3286 4410 * 4835 * 5498 3666 6320 4189 5579 4248 5254 5874 * * 22 94 3990 * 1499 630 * 0 6862 3139 1000 E 23 5665 4608 2840 814 5807 4881 5243 * 7412 5194 * * 7001 3946 * 5521 5334 * * * 23 46 5007 * 345 2234 0 * 6862 2652 1000 L 24 5941 * * * 6112 * 6720 2420 * 630 4013 * * * * * * 3952 * * 24 0 * * * * * * 6868 0 0 Q 25 3968 4685 4103 4812 * 5133 5879 * 4276 * 6123 4427 3935 4767 5386 1303 3235 6986 * * 25 18 6340 * 0 * * * 6868 1000 0 V 26 5921 * * * 1462 * * 3525 * 1510 5324 * * * * * * 2666 * * 26 0 * * * * * * 6868 0 0 M 27 4661 5798 5444 3450 6993 7106 4710 5932 2354 5301 6665 4714 4361 3460 2771 3468 4336 3977 * * 27 0 * * * * * * 6868 0 0 P 28 2956 4713 6867 2469 * 5976 * 4965 1840 6815 * * 3961 3788 4043 6146 4650 4145 * * 28 0 * * * * * * 6868 0 0 G 29 5466 * 3938 * * 367 7194 * 5937 * * 3424 * * * 6756 6504 * * * 29 10 7227 * 0 * * * 6868 1000 0 N 30 4521 7158 1009 2025 * * * * 6707 6229 5780 6665 * 2878 7227 * * 6248 * * 30 0 * * * * * * 6868 0 0 I 31 5330 5832 7282 4322 5458 * 5754 2030 3405 3203 5172 6836 5275 5039 3597 6685 3789 3132 7207 4889 31 0 * * * * * * 6868 0 0 V 32 6583 * * * 3590 * * 1867 * 1867 5284 * * * * * * 1723 * 5079 32 0 * * * * * * 6868 0 0 F 33 5129 6384 4412 2691 6665 5839 5746 3354 3906 3219 4821 4795 * 4637 3817 4740 2961 4271 6873 5010 33 64 4522 * 1254 784 * * 6868 2785 0 V 34 4829 5289 * 6123 6774 * * 1997 * 2454 * 6718 * * * * * 1079 * * 34 49 4901 * 2074 391 * * 6868 2516 0 L 35 6123 * 5595 6384 5018 5712 4863 2818 6867 1416 6218 7227 7201 5239 7491 5601 3273 3129 6062 4996 35 24 6707 7199 1585 585 * * 6868 1000 0 K 36 5448 6891 3053 1802 * 3577 6073 * 3043 * 6716 3815 5824 3864 4181 3594 * 6561 * 5272 36 63 4558 * 1391 693 0 * 6865 2909 1000 K 37 5927 * 4147 3871 * 5535 5256 5286 1969 6286 5777 5085 4769 2987 3242 3865 3978 4380 7009 6252 37 7 7628 * 1585 585 * * 6868 1000 0 G 38 4343 5184 3781 4355 * 3755 5430 4478 4113 5516 * 3796 4192 4615 4776 2920 3550 3539 6705 3994 38 52 5569 6112 1000 1000 * * 6868 2094 0 N 39 5096 5859 1787 2884 * 3833 6130 6518 4957 5597 * 2534 4699 4741 6756 3579 5929 5883 * 7583 39 40 5690 6976 869 1144 0 * 6860 2074 1222 D 40 3965 * 1802 3405 6679 3836 6546 * 3660 6901 5724 4087 3908 5876 4079 3258 4908 5752 * * 40 100 4572 5340 3166 170 0 * 6866 3058 1000 N 41 6859 * 2435 3631 6365 1258 5354 * 6193 6146 6598 4080 7394 5798 6632 5572 * 7017 3172 * 41 21 6101 * 0 * 0 * 6871 1725 2549 W 42 * 6820 * * 5440 5248 6315 * * 5922 6477 * * 6904 5157 5887 5524 5600 311 * 42 22 6018 * 538 1685 * * 6868 1611 0 A 43 4285 4925 * 7106 4090 5607 * 4948 4788 3098 4701 * * 5892 6025 7188 5640 5903 1311 2982 43 0 * * * * * * 6868 0 0 T 44 4658 6710 6504 2976 3201 5689 * 4516 3544 2780 5837 * * 3835 3838 * 4874 3473 4178 3782 44 35 5390 * 696 1386 * * 6868 2331 0 V 45 2636 4453 * 6296 * 1311 * 5904 5369 6522 6045 7260 * 6402 5327 6611 7169 1998 * * 45 61 4597 * 879 1132 * * 6868 2907 0 M 46 5733 4903 5456 2600 * 5816 4144 4893 3222 4585 5239 5210 * 3648 2673 4339 3328 4337 * 6087 46 208 2898 * 1308 746 * * 6865 4654 0 F 47 5795 4910 4360 5848 4866 * 4890 4263 4042 3259 6049 3498 5535 * 1949 4139 4804 4396 6246 4058 47 322 2322 * 1027 973 * * 6865 5265 0 N 48 5165 * 2506 4218 5879 3049 5693 5028 3743 * * 2939 6135 4905 4233 3500 2641 * * * 48 148 3355 * 1711 526 * * 6865 4404 0 G 49 7243 * 3282 5276 * 864 6339 6871 6958 * * 2787 5507 5032 4535 4751 6862 * * * 49 43 5096 * 2613 258 * * 6865 2104 0 Q 50 4899 7370 5647 2959 * 5740 5234 6832 2225 6091 * 3766 6636 2533 2271 4806 6129 5989 * * 50 31 5549 * 1058 944 * * 6865 2116 0 K 51 6201 6164 * 2833 4524 * * 4378 3602 6378 4930 6934 5023 3637 3176 3167 3350 2604 6697 * 51 18 6356 * 1000 1000 * * 6864 1702 0 G 52 * * * * 6049 43 * * * 6116 * * * * * * * * * * 52 0 * * * * * * 6853 0 0 L 53 5597 * 6927 * 2817 * 6586 3502 * 2174 4836 * * * 7100 6477 6559 3989 2132 2702 53 0 * * * * * * 6882 0 0 V 54 4183 5598 * * 1469 * * 2522 * 4960 6808 * * * * * * 1598 * 5818 54 15 6597 * 0 * * * 6882 1000 0 P 55 * * * * * 6569 * * 5048 * * * 125 6497 * 5478 * 6856 * * 55 0 * * * * * * 6882 0 0 C 56 2294 5624 * 4014 4689 4767 6801 5441 4112 4756 * 7144 6293 * 3812 1933 3555 4197 * 5710 56 0 * * * * * * 6882 0 0 N 57 3730 5801 4418 5502 * 5954 6635 5518 7140 5439 * 1678 * 4934 6174 2134 3196 5204 6541 5281 57 15 6597 * 1585 585 * * 6882 1000 0 Y 58 6459 3548 * * 2333 * 4372 5041 * 5484 6807 * * * 6500 6769 * 5007 * 880 58 27 6586 6942 3170 170 * * 6882 1000 0 L 59 4612 5748 * * 4712 * * 3229 * 1912 5829 * * * * * 4168 1131 * * 59 32 5513 * 2089 386 * 0 6871 2185 1000 E 60 5268 * 4040 1583 * 6504 5856 6637 3771 6613 5861 6760 * 2200 3788 5185 3873 4895 * 6390 60 45 5040 * 1886 455 * 0 6806 2104 1000 P 61 5801 * 5232 3368 5764 5289 6382 4416 3125 2923 6666 * 1754 5717 5782 6835 7092 2740 * * 61 35 5370 * 707 1368 0 * 6783 2250 1000 V 62 4920 5808 5912 * 4934 * * 2056 6135 2143 4351 * 5677 6529 4910 * 4068 2118 * 5957 62 26 5811 * 1701 530 * * 6769 1632 0 S 63 3956 6222 3075 5093 * 3146 * * 3183 4860 * 3519 3859 4810 * 2515 3170 4686 * * 63 112 3744 * 1421 674 * * 6704 3113 0 G 64 4178 6052 4706 4560 * 3042 * * 3784 6776 * 3715 2119 * 4233 3195 2763 5070 * * 64 31 5548 * 1482 639 * * 6564 1679 0 P 65 6436 * 4559 4376 6013 5037 6261 * 3900 6310 * 3782 1126 * 3952 3500 4376 5206 * * 65 0 * * * * * * 6470 0 0 S 66 3653 * 6150 3981 * 5197 6602 * 2837 * 5804 4150 5784 4096 3671 1769 2805 * * * 66 0 * * * * * * 6419 0 0 S 67 1743 * 6024 4400 * 4427 * * * * 5959 4846 5557 * * 1397 2834 * * * 67 0 * * * * * * 6255 0 0 G 68 3403 * * * * 143 * * * * * * * * * * * * * * 68 0 * * 0 * * * 5237 0 0 //