HHsearch 1.5 NAME c2dlkA_ FAM FILE c2dlkA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2dlkA_.a3m DATE Fri Mar 12 00:51:11 2010 LENG 79 match states, 79 columns in multiple alignment FILT 111 out of 17086 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.8 EVD 0.5462 2.1438 SEQ >ss_dssp CCSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC >sa_dssp EEEEEECDEBECEECDEECEEEEECEDBCDDECEDEEDCEBEDEECEDECEEEEDCDDBDEECEEEEEEEDEEEEEEEE >ss_pred CCCCCCCEEECCCCCCCEECCHHHCCCCCCCCCCCEEEEEECCHHHEEEEECCCCCCCCEEECCCCCCEECCCCCCCCC >ss_conf 9876735043152135567578674404432222102353171012023102576622156227885688767888789 >Consensus gstxxkxxxcxcxxCxxxFxxxxxLxxHxxxxhxxxxxxxcxxxxCxkxfxxxxxLxxHxxxHxxxxxyxCxxCgkxFg >c2dlkA_ GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG >UniRef50_B0W5A1(151-225:259) Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W5A1_CULQU E=1e-08 s/c=0.81 id=21% cov=96% --TGIKAHGCEI--CGKRFDLLEEMEKHRERHSTENKPFACRVDGCPKRFMHEFDMERHLALKHGKAPHGCDICSKVFG >UniRef50_B2VR59(533-617:680) Zinc finger protein 383 n=2 Tax=Pleosporineae RepID=B2VR59_PYRTR E=1e-08 s/c=0.72 id=20% cov=100% GHAGYRPYACSIEGCDKTFATNQAKDNHERTHTGerpyialHEGKKPHKCRFCSFTCADSSNLSKHERTHQTLRPYRCPHPNCTF- >UniRef50_B0X6F8(173-242:484) Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0X6F8_CULQU E=2e-07 s/c=0.81 id=15% cov=90% ------PKTFQCTLCGKIYKSSKNLKEHETSHFPDRMNHKCHICSQE--FARRNYYLVHLKMHQTENQFKCNECDKTF- >UniRef50_Q26336(466-548:581) Egl-43 n=4 Tax=Caenorhabditis elegans RepID=Q26336_CAEEL E=4e-05 s/c=0.59 id=20% cov=96% --TGEQPYKCQY--CERSFSISSNLQRHVRNIHNKPNTSLTPHNHHRQRSLHNSTSTstttttvHHPLLHLPGTSFRCQKCERCFG >UniRef50_UPI0000D9EDF0(31-123:148) PREDICTED: similar to zinc finger protein 180 n=1 Tax=Macaca mulatta RepID=UPI0000D9EDF0 E=0.0003 s/c=0.50 id=16% cov=97% --TDTGKKICDCKECDKATRNKtSQLILHQKTDsggspvnvlnvgrllvKSIVERNCYVSNAHEEAFQNSSAVTRLERTHTEEKPYTFNKCGKAF- >UniRef50_Q7QAU3(630-684:689) AGAP003537-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7QAU3_ANOGA E=0.0005 s/c=0.83 id=21% cov=59% ---------------EKTFKNKYSFQRHAFLYHEGKQRKVFPCTVCDKQFSRPDKMKNHLR------------------ >UniRef50_Q24478(507-576:1096) Centrosome-associated zinc finger protein CP190 n=4 Tax=melanogaster subgroup RepID=CP190_DROME E=0.001 s/c=0.64 id=21% cov=86% -----------CEHCGWRSVNNRELHFHMYMEHQTKSllYTFAECALCNQSYRTKGELEAHINeVHTDDNKQQCIYCNKVF- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4569 0 0 S 2 3624 * * 2677 * * 3681 * * * * 3463 * * * 752 * * * * 2 0 * * * * * * 6681 0 0 S 3 4252 * * * * * 5429 * * * * 4400 * * * 2155 682 5102 * * 3 0 * * * * * * 7331 0 0 G 4 5353 * 2924 4551 * 1045 3190 * 4244 * * * * 5410 5900 3748 5605 5725 * * 4 0 * * * * * * 7668 0 0 S 5 5114 * 3895 1688 4605 * 5230 4765 4029 4396 * 4029 6311 5105 5823 3543 2880 5681 * 5750 5 25 5844 * 1000 1000 * * 7958 1000 0 S 6 * * * 3721 * 2941 4999 * 1367 * * * 4912 3591 2223 5109 5997 * * * 6 0 * * * * * * 8150 0 0 G 7 4612 * 5184 4110 * 3469 5815 5256 3039 4145 6280 5231 1297 6142 5197 4055 6259 * * * 7 74 4787 6190 650 1464 * * 8193 2118 0 M 8 * * * * 1835 5038 3576 6527 2502 4115 6406 6053 * 6374 6375 6382 6176 5387 * 1946 8 14 * 6692 * * 0 * 8404 0 1000 P 9 4089 * 5414 4838 * 6391 6110 4779 2132 5056 6693 * 2563 3490 4362 3155 3636 4250 * * 9 16 6482 * 0 * 0 * 8478 1000 1000 C 10 * 691 * * 3527 * 3695 5221 * * * 6210 * * * * * 6019 * 2637 10 66 * 4480 * * * * 8509 0 0 D 11 5792 * 3102 3197 * 5424 5026 6476 3445 4733 6312 4424 3817 3251 3549 4099 3112 4852 5998 5890 11 68 * 4437 * * * 0 8450 0 2798 F 12 6009 925 * * 3985 * 4266 4725 5643 4283 6404 * * * * * * 4505 3483 3501 12 177 * 3118 * * 1021 979 9139 0 4225 P 13 5033 4300 3544 3506 * 4194 5667 6341 2926 5315 * 4992 2229 4190 4676 4222 4993 4221 6686 6095 13 0 * * * * 1844 471 8718 0 5622 G 14 6469 6859 3162 2746 6691 2384 4161 4114 3634 4148 6868 4311 * 3587 6376 5679 4654 4555 * 6438 14 13 6766 * 2585 263 0 * 9050 1000 4740 C 15 * 58 * * * * * * * * * 5988 * * * * * * * 5386 15 56 5749 5706 1255 783 * * 9255 1679 0 G 16 * 7035 3249 3562 * 1742 3984 * 4842 4918 * 3656 3941 3856 5168 4130 3981 * * 6555 16 0 * * * * * 0 9231 0 1083 R 17 3869 6994 6452 3927 5062 * 6782 5178 1615 4990 5393 6359 5972 3383 2768 * 5287 4679 5083 4909 17 17 6393 * 0 * 0 * 9231 1000 1083 I 18 3726 6913 5738 4490 * 5819 6825 3916 3532 * 6683 5900 5201 4420 2471 2639 3358 2891 * * 18 16 * 6461 * * * * 9251 0 0 F 19 6382 4513 * * 635 6511 * 6664 * 4174 * 6891 * * * 4273 3899 * * 3368 19 16 6492 * 0 * 0 * 9231 1000 1000 S 20 3443 * 3780 4888 5779 4225 5112 5486 3054 5813 6461 4168 3903 6690 3282 2895 3278 5395 * 4932 20 0 * * * * * * 9251 0 0 N 21 4991 * 4766 * * 5200 3652 5706 4525 4365 6924 2722 * 4201 2718 2632 2709 * 6653 5408 21 0 * * * * * * 9251 0 0 R 22 3903 6036 * 4853 4948 5594 4340 6405 2249 3794 6684 4522 3324 5762 3568 2768 5260 5317 6263 5661 22 36 6065 6683 0 * * * 9251 1000 0 Q 23 3826 6493 4048 3629 5162 4984 4622 5816 4967 5300 5584 4041 4254 4536 4018 2319 3626 6659 6372 4068 23 0 * * * * 0 * 9247 0 1000 Y 24 4147 6861 3132 3161 * 4050 4155 * 3873 4605 6692 3083 5780 3380 4169 3040 6815 5664 * 4814 24 0 * * * * * * 9251 0 0 L 25 * 6263 * * 3283 * * 4982 6763 633 3907 * * * 5379 * * 4580 6702 4142 25 0 * * * * * * 9251 0 0 N 26 3900 5308 4845 4891 6910 * 5690 4568 2284 4502 * 4456 * 3348 3296 4025 3544 3776 6394 4563 26 0 * * * * * * 9251 0 0 H 27 4843 * 4607 3993 5532 6569 5360 4093 3165 4135 5530 4731 * 3473 2227 4524 5079 3634 * 4027 27 45 6520 5663 1585 585 * * 9251 1000 0 H 28 * * * * * * 111 * 5770 * * * * * 4880 6365 6660 * * * 28 65 5210 5893 0 * 0 * 9246 1853 1656 K 29 4786 6392 * 3322 6585 6371 * 3036 3809 2600 3128 5898 * 3069 4428 6366 6511 2806 * 6908 29 106 * 3818 * * 961 1040 9235 0 1654 K 30 4383 6470 5949 4449 5986 * 5193 4354 2209 5339 5053 3885 6546 3570 1877 6742 5182 6704 5396 6568 30 27 * 5754 * * 169 3179 9200 0 4155 Y 31 3573 6534 5969 3910 5660 6929 5146 3792 3686 3702 6630 4298 6369 4371 4027 3923 2569 4143 5524 4499 31 39 6677 5868 1000 1000 0 * 9228 1000 2292 Q 32 4427 4902 6050 4841 5656 4951 2004 3626 3091 4905 5129 4419 5257 3831 5600 5669 4621 3834 * 6137 32 55 5529 5985 3658 119 1044 958 9237 1588 1626 H 33 4662 6480 5586 5360 6035 5716 915 6352 4679 5029 5702 5834 6343 5140 5350 4153 4054 5117 * 6553 33 52 5159 7046 3264 159 571 1613 9248 2216 2233 I 34 4747 4977 4773 3803 5086 3243 4382 4163 3895 4729 6799 4279 4394 4316 4236 3490 3183 4321 * 5748 34 42 5113 * 2056 397 979 1022 9244 2177 1712 H 35 4011 5519 4117 3209 6803 3164 3372 4325 4207 5257 6688 3626 3796 3849 4309 4927 4143 5009 * * 35 64 4843 6855 1756 506 0 * 9251 2906 1000 Q 36 4853 * 3559 2203 * 5958 5462 4565 2823 4702 * 5212 3885 4335 3681 4629 3970 4314 7117 5737 36 144 4080 4797 2844 216 * 0 9239 3821 1000 K 37 4412 * 6539 2976 4708 4598 4524 5265 2530 5470 5082 4897 4332 4588 2543 3892 4697 6803 6669 5654 37 86 4371 6681 1601 577 * 0 9185 3278 3186 S 38 4984 6128 5166 3028 5740 5628 5745 5173 3666 4962 * 4293 2377 5205 3481 3326 4631 4370 6624 4361 38 94 4339 6208 608 1539 2367 311 9173 3239 3418 F 39 5886 6571 6772 4656 1878 * 3503 5220 3534 4287 6625 5981 5070 5931 5093 4973 5126 6621 5150 2330 39 77 4588 6571 3379 146 0 * 9145 2888 3424 S 40 4254 3080 5804 4534 5789 5935 5345 5841 2799 4459 5551 4791 3385 4481 4411 4864 3880 2896 6371 6798 40 21 6905 7323 1585 585 * 0 9256 1000 1000 C 41 4588 989 5843 4969 4201 6665 3541 5311 5310 6261 * * 5040 6369 5232 * 6423 4830 * 3720 41 101 5705 4364 3657 119 1023 977 9267 1724 1654 P 42 * 6355 3301 4099 5106 4827 3742 4452 2882 4493 * 5177 3236 3799 5046 3413 3559 4783 * 6351 42 114 4938 4519 4113 86 2662 248 9219 2122 3839 E 43 4580 1440 * 4712 3454 6487 3206 4805 4481 6075 5842 * * 4986 4189 5991 6602 4718 4458 4966 43 178 4693 3693 3153 172 844 1175 9179 2901 4876 P 44 4428 2372 4168 3053 6241 4178 * 4625 3791 5437 6910 4070 2383 6322 4633 5125 5868 6567 6477 * 44 13 * 6789 * * 1317 740 9102 0 5134 A 45 4150 * 3560 4930 4647 3075 5193 3329 4863 4203 5819 4310 4292 5061 4029 3466 4336 3500 * 6246 45 22 7044 7036 3807 107 221 2816 9127 1000 4238 C 46 5113 498 * 4767 5386 7024 4616 5673 6679 * * * 6716 6858 5669 4754 6373 6722 6604 5816 46 62 7005 4880 3170 170 1000 1000 9245 1000 1682 G 47 5751 4629 3678 3559 5373 1981 4672 6187 5070 6798 * 3483 3790 7019 4263 3305 4353 5192 * 6656 47 54 * 4767 * * 1292 757 9255 0 3131 K 48 4121 * * 4089 5725 5042 4973 6334 1532 5724 3903 5723 * 4543 2567 5537 5710 5305 * 4008 48 48 6836 5367 3000 193 1168 850 9205 1000 3813 S 49 3073 6527 5932 4627 5734 3496 6792 5011 3403 5566 5705 5661 * 5042 2992 2721 2719 4271 * * 49 63 4941 6651 714 1357 603 1550 9206 2142 3413 F 50 4658 5163 * * 749 6595 * 6297 6717 5038 * * 6379 6392 * 5305 4425 5273 * 2709 50 47 5656 6354 2905 207 0 * 9231 1664 2170 N 51 2941 * 5014 5439 6870 6792 * 5587 3255 3602 5814 5503 3452 4710 3301 3198 3197 5705 * 3604 51 0 * * * * * 0 9228 0 1000 F 52 5871 5728 5103 4669 5682 4782 4242 * 3493 5850 6903 3201 * 4834 2914 2470 2708 5958 5956 5044 52 13 * 6799 * * 0 * 9228 0 1000 K 53 4159 6452 5769 4255 * * 4231 5744 2148 3521 6792 4360 3891 4589 2618 2969 * * 6565 6737 53 0 * * * * * 0 9239 0 1000 K 54 3807 * 3473 4186 4678 4091 3734 5898 4002 4248 * 3553 * 4540 4012 2581 4642 4962 5928 4922 54 17 6421 * 0 * * 0 9239 1000 1000 H 55 3507 * 3006 3316 6811 4657 3295 * 3484 4558 5447 3546 * 4412 5849 3110 4075 6902 6807 4664 55 11 7001 * 2000 415 0 * 9239 1000 1000 L 56 6718 7181 * * 3227 * * 5639 6629 710 4519 * * 6554 4793 6431 * 4541 5046 4050 56 15 6568 * 4954 47 * * 9251 1000 0 K 57 3881 6805 4228 3547 * * 5466 4297 2418 4507 6554 4343 7012 3287 3203 4621 3691 5163 5882 4715 57 17 6431 * 2807 222 * * 9251 1000 0 E 58 3892 * 4082 3840 6988 6461 4784 6113 3066 4419 5900 4076 * 3931 2137 3962 4560 3802 * 5606 58 18 * 6312 * * * * 9251 0 0 H 59 * 6130 * * * * 43 * * 6055 * * * * * * * * * * 59 18 6357 * 0 * * 0 9223 1000 1000 M 60 5626 5652 * 4074 * * 6716 2948 3426 2277 2708 6661 6421 3656 4424 4446 6972 3442 7067 6922 60 77 4270 * 0 * * 0 9223 3497 1000 K 61 4733 6103 6901 5789 * 6837 4981 4392 2561 3555 6848 3566 * 3729 1651 5782 5006 5774 * 5365 61 74 4322 * 1008 992 0 * 9223 3404 1000 L 62 5154 * 6998 5099 6709 5820 5532 3061 4127 3530 4779 5009 * 5101 3737 3530 2147 3102 * 5508 62 71 4378 * 1151 863 * * 9213 3164 0 H 63 5314 * * 5845 * * 212 * 5923 * 7027 5873 6713 5323 * * * 6645 * 6852 63 94 4241 6624 2394 305 * * 9213 3498 0 S 64 3863 4751 6769 4623 4343 5289 3148 * 4211 4057 6467 4011 6761 5057 3605 3070 2262 5616 * * 64 41 5813 6621 2062 395 0 * 8892 1680 1000 D 65 4421 * 3155 3562 * 1719 * 6278 3578 * 5555 3567 4038 4813 4889 4266 4897 4850 * * 65 13 * 6776 * * * 0 8777 0 1000 T 66 5217 * 3360 2106 * 4722 6554 3502 4234 4606 6713 5784 4447 3556 4691 4000 4119 3395 * * 66 0 * * * * 959 1042 8764 0 1673 R 67 5035 * * 3990 4719 5708 * * 1547 4977 5951 4337 4477 4992 2192 5185 3926 6435 * 6642 67 67 5247 5707 419 1987 * 0 8776 2186 1000 D 68 5263 6637 5287 5544 5144 5701 6762 4809 3911 4479 6680 5127 1249 4626 3846 3768 6618 4052 * * 68 45 5030 * 2038 402 0 * 8742 2316 2177 Y 69 * * 6380 6718 1909 6777 3383 5116 4974 4734 * * * 6442 * 5644 6294 6504 5609 1207 69 0 * * * * * * 8767 0 0 I 70 4236 5966 * 3380 6305 5624 5723 3374 2495 6635 5472 * 4352 3148 3419 3544 3910 3857 * * 70 44 5848 6310 2172 362 * * 8767 1652 0 C 71 * 53 * * 5640 * 5957 * * * * * * * * * * * * * 71 57 4688 * 843 1177 0 * 8747 2709 1000 E 72 4723 6261 3219 2874 6269 5300 5881 6435 3127 5660 * 4048 2423 4097 4808 3603 3861 6388 * * 72 0 * * * * * * 8766 0 0 F 73 * * 4295 2952 4275 * 5191 3349 3175 4047 5032 * 6337 3292 5021 4619 4597 3209 * 3245 73 38 5280 * 1000 1000 * * 8766 1745 0 S 74 6388 293 5536 * * * * * * * * * 3848 6358 4423 6743 6302 * * * 74 0 * * * * * * 8766 0 0 G 75 4405 6274 4325 3850 * 826 5260 * 5517 6573 * 3689 4472 5178 5541 5235 * * * * 75 0 * * * * * * 8432 0 0 P 76 6416 2577 6344 4402 5438 * 6182 * 1180 * * * 6386 3718 2887 * 6576 * * 4344 76 0 * * * * * * 8423 0 0 S 77 2788 5833 6084 * * 5231 4161 6297 3784 * * 4605 6170 6597 4093 1697 2594 4128 * * 77 0 * * * * * * 8305 0 0 S 78 * * * * 198 5990 * * * * * * 5526 * * 4235 5733 * * 5718 78 0 * * * * * * 7922 0 0 G 79 * * * * * 0 * * * * * * * * * * * * * * 79 0 * * 0 * * * 4705 0 0 //