HHsearch 1.5 NAME c2dl4A_ FAM FILE c2dl4A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2dl4A_.a3m DATE Wed Mar 10 18:15:44 2010 LENG 68 match states, 68 columns in multiple alignment FILT 112 out of 2730 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.9 EVD 0.4385 0.5261 SEQ >ss_dssp CTTCSCCCEEEESSCCCCSSTTBCCCCTTCEEEEEECCCSSEEEEECSSCEEEEETTTEEECCCCCCC >sa_dssp EEEEEEEDCBCADEDBECEEEECACBEEDBEADBEDEEEEEDCCADBEEDEBDAABECBEEEEDEEEE >ss_pred CCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCEEEECCCCCCC >ss_conf 97778867899931427888867007589989999808888499997994999962328995899887 >Consensus gxxxxxxxxxxaxxdyxxxxxxeLsfxxGdxixvlxxxxxxWwxgxxxgxxGxvPxxyvxxixxxxsg >c2dl4A_ GSSGSSGNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSGPSSG >UniRef50_UPI0000DB6CBB(2-63:1021) PREDICTED: similar to dynamin binding protein n=1 Tax=Apis mellifera RepID=UPI0000DB6CBB E=1e-09 s/c=1.03 id=22% cov=93% ----EPGLLTRVLSDFLTTIDGELSLHKGEYFLIYSIIDRHWCYGESRGRTGKFPSNHLHKVEIPS-- >UniRef50_O13736(77-142:1420) Actin cytoskeleton-regulatory complex protein sla1 n=1 Tax=Schizosaccharomyces pombe RepID=SLA1_SCHPO E=5e-09 s/c=0.94 id=18% cov=99% -TEAEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSDWILVGFNNNFGLAPRNYVEGMDASSA- >UniRef50_UPI00016E5E99(222-285:888) UPI00016E5E99 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E5E99 E=1e-10 s/c=1.06 id=18% cov=96% ASKAGEEEKYVTVQSYTSEGKDEIAFEKGAVVEVIQKNLEGWWFIRYQDKEGWAPASYLKKMKD---- >UniRef50_UPI000179194E(874-933:954) PREDICTED: similar to AGAP007723-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI000179194E E=1e-05 s/c=0.85 id=22% cov=87% ---GKHADSYISLADYNALRPTDATLKRGDKVDLLKAGSSSWWYVKVHGskTEGWVPSAHLEI------- >UniRef50_B7PEH9(444-503:639) Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PEH9_IXOSC E=0.0001 s/c=0.80 id=18% cov=90% ----QGAKLVQVVYPRTANNDKELTVVRGEFLEILDDSRKWWKTRNIRGQVGHVPHTIVTPYQD---- >UniRef50_UPI0000E821EA(367-440:456) PREDICTED: similar to KIAA0612 protein, partial n=7 Tax=Gallus gallus RepID=UPI0000E821EA E=4e-05 s/c=0.66 id=20% cov=96% GQASATFQRFLAQHSYNPVEgpneepESELPLTAGQHLNVFGaVDENGWFQGELtDGTRGLVPSNLVAEVSD---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 3455 * * * * 219 * * * * * * * * * 4334 * * * * 1 0 * * * * * * 5244 0 0 S 2 2630 * * 4855 * * * * 3974 4925 * 3936 * 3994 * 1485 2433 * 4758 * 2 0 * * * * * * 5727 0 0 S 3 2552 * * 3194 * 3654 * * 3913 5774 * * 4388 * * 1237 5198 4140 * * 3 0 * * * * * * 6087 0 0 G 4 2260 * * 4289 4990 1462 * * * * 5539 * 4027 * 4748 2614 5734 4529 * * 4 0 * * * * * * 6248 0 0 S 5 3084 * * 3423 * 2781 5466 6009 3511 5051 * 4577 6003 3179 5661 2834 3113 4511 * * 5 0 * * * * * * 6535 0 0 S 6 3165 * 3751 4768 * 3421 4884 * 5525 * * 3417 2215 * * 2121 4136 4934 * * 6 0 * * * * * * 6706 0 0 G 7 3409 * 6139 3405 4743 1141 5142 5794 4999 * 6556 6077 6811 5507 5468 3248 5039 * * 6120 7 53 4781 * 1307 747 * * 6797 2247 0 N 8 * * 4015 3386 5864 6550 * 6140 3160 4314 5830 3891 3327 3773 2867 4510 3440 3217 * * 8 0 * * * * * * 6926 0 0 T 9 5287 * * 4817 * * 5942 3884 3018 3010 5223 * 5122 4053 2775 5440 2761 3216 5619 4412 9 12 6942 * 1000 1000 * * 7075 1000 0 Y 10 2289 3539 * * 2995 5090 5028 * 6646 4449 4761 * * * * * 6398 2249 * 2258 10 21 6121 * 0 * * * 7024 1632 0 V 11 * * * 4505 * * * 2825 2859 3720 5882 * * 3287 2498 6829 4314 2070 * 7043 11 0 * * * * * * 7066 0 0 A 12 683 4093 * * * 6387 * 6707 * * 6448 * * * * 4101 4820 2383 * * 12 18 6358 * 1000 1000 * * 7105 1000 0 L 13 5915 * * 6186 6980 * * 2969 3612 1505 3768 5240 * 5336 4584 5445 3953 2775 * * 13 31 5570 * 495 1784 * * 7117 1656 0 Y 14 4025 5645 6391 4850 2852 * 3072 6463 5328 5583 6731 5088 * 4983 5131 4832 * * 4561 1392 14 0 * * * * * * 7117 0 0 K 15 4427 * 1155 4450 * 4790 6950 * 4894 * * 4221 3304 5658 6772 2632 5400 * * 6383 15 37 5323 * 1000 1000 * * 7133 1648 0 F 16 6418 5795 * * 1300 * 4081 * * * * 6251 * * 5800 6569 6459 * 4732 1271 16 29 5650 * 1000 1000 * * 7133 1703 0 V 17 5226 6948 3276 2728 6525 * * 4021 3561 5622 * 3404 5215 3465 4620 3573 2669 4658 * * 17 41 5150 * 1682 539 * * 7133 2174 0 P 18 1461 * 6418 6702 * 2894 * * 5819 * 6163 5544 2204 5722 5811 2943 4504 * * * 18 0 * * * * * * 7133 0 0 Q 19 3568 * 3360 2968 * 4579 * * 3811 6590 5743 5632 4948 3283 3261 2955 3316 4294 * 6886 19 102 3867 * 1240 795 * * 7133 3262 0 E 20 3762 * 2509 3897 5631 3051 4739 5587 5365 4987 4696 3266 5869 4103 4127 3931 4345 4690 * * 20 11 7040 * 2585 263 * * 7133 1000 0 N 21 4102 * 2812 2425 6779 4989 6641 5395 4439 7318 * 5189 2488 5213 6676 2939 3867 4469 * * 21 23 5979 * 2229 346 * * 7133 1667 0 E 22 5415 5143 1738 3363 * 2588 4668 * 4158 * 6637 3459 * 4886 6234 4218 4372 5162 * 6418 22 26 5800 * 1779 497 * * 7133 1718 0 D 23 5947 5524 2412 855 6206 6658 6550 * 5192 * 6849 * * 3676 6736 5010 6340 * * 5622 23 52 4832 * 1000 1000 * * 7133 2197 0 L 24 6590 * * * * * * 2573 * 491 5582 * * * * * 6437 3689 * * 24 0 * * * * * * 7133 0 0 E 25 3642 5553 5818 4450 * 5482 5951 7268 4569 * 6325 4535 3604 4257 5827 1290 3027 6886 * * 25 0 * * * * * * 7133 0 0 M 26 5323 6428 * * 1210 * * 3736 * 1852 4512 * * * * * * 2887 * * 26 0 * * * * * * 7133 0 0 R 27 4485 4556 4834 3800 5963 6768 5622 5639 2229 5503 6059 4785 5152 2972 3506 3246 4499 4262 * 6886 27 0 * * * * * * 7133 0 0 P 28 3381 5373 7071 2540 * * * 6658 2163 * * * 3341 3517 3004 6433 3900 3680 * * 28 0 * * * * * * 7133 0 0 G 29 5645 * 3652 6676 * 455 5599 * * * * 3416 * * 5785 7027 5576 * * * 29 0 * * * * * * 7133 0 0 D 30 4701 * 1097 1772 * * * * 6423 * * 6049 * 2816 6469 * 5565 * * * 30 0 * * * * * * 7133 0 0 I 31 4790 6584 * 3957 5213 * 5980 2604 3579 3054 4455 6948 5389 5243 3709 * 3915 2321 6600 5608 31 0 * * * * * * 7133 0 0 I 32 * * * * 3858 * * 1328 * 2127 4903 * * * * * * 2016 * 5436 32 12 6968 * 2322 322 * * 7133 1000 0 T 33 4160 6825 4313 2804 4185 6637 5193 3779 3677 3919 6163 5532 * 6418 3782 5115 2957 4012 7116 3549 33 26 5808 * 620 1518 * * 7133 1725 0 L 34 4643 5563 6340 6325 5567 6473 * 2064 * 2633 6793 5350 * * * 6538 * 1194 * * 34 23 6001 * 1695 533 * * 7133 1647 0 L 35 5417 5331 6042 6772 5454 5280 6584 2762 * 1397 7119 * * 6968 5881 4567 3603 3259 * 3639 35 14 6736 * 0 * * * 7133 1000 0 E 36 5216 * 3412 2479 6251 3476 6793 * 3085 * 6581 3855 5847 3682 3873 2811 6678 4602 * 4906 36 51 5211 7027 976 1024 * * 7133 2198 0 D 37 5355 5749 3220 3519 5692 4899 5257 4196 2256 * 4843 4996 5439 4100 3614 3896 4041 4537 * 5705 37 40 5688 7002 1000 1000 0 * 7133 2162 1000 S 38 5613 6142 2841 3089 7079 3554 4331 4286 5971 5648 * 3656 3927 4853 5069 3657 4368 3229 5887 5775 38 140 3899 5312 1390 693 0 * 7131 3581 1000 N 39 6120 5142 1961 3688 * 4269 5236 6420 4950 4713 * 2377 3777 5431 4425 4307 5803 4769 6492 6529 39 77 4260 * 410 2015 0 * 7053 3122 2255 E 40 4194 6550 2065 3335 * 3572 5639 * 3530 6756 6446 3951 4551 3951 4183 2945 5732 6745 * * 40 40 5732 6899 659 1447 * * 7133 1719 0 D 41 6510 * 2339 3662 * 1269 5119 * * 6155 6417 3828 * 5466 5622 4468 6801 6907 4190 6338 41 11 7061 * 0 * 0 * 7134 1000 1000 W 42 * * 5924 * 5407 5007 * * * 6550 * * * 5643 4729 6763 5417 6290 346 5141 42 29 5652 * 0 * * * 7133 1644 0 W 43 4378 4425 * * 4867 6584 * 5744 4980 2748 4275 * * 6731 * 7043 5641 7126 1121 3240 43 0 * * * * * * 7133 0 0 K 44 5704 6538 5576 2946 3794 * 5852 * 3459 2837 4965 5628 * 4077 4256 6142 3490 3311 4891 3357 44 16 6538 * 1585 585 * * 7133 1000 0 G 45 2528 3714 * 5924 * 1139 * 5950 6756 6466 6572 * * 6290 4980 6340 6437 2605 * * 45 45 5032 * 965 1036 * * 7133 2572 0 K 46 5281 6325 4712 2411 4679 5789 5542 * 2641 5071 5396 5944 * 3573 2446 5639 3361 4972 * 6600 46 63 4557 * 721 1347 * * 7133 2929 0 I 47 3507 4609 4392 * 4233 * 5111 3865 5219 2671 7062 2789 5080 5791 4188 3693 4874 3570 * 4701 47 403 2036 * 1107 901 * * 7133 5396 0 Q 48 4129 * 3119 4801 * 3243 4666 5928 3430 5657 6702 2504 * 4593 3785 4494 2703 6422 * 6899 48 154 3305 * 1187 835 * * 7133 4431 0 D 49 5739 * 4855 5002 * 880 * 6968 4710 6433 6745 3195 6437 5957 3849 4113 5071 * * 6469 49 163 3227 * 1198 826 * * 7133 4130 0 R 50 5238 6731 * 2624 * 6290 6997 4696 2331 6433 6886 4244 6923 2203 2528 6985 4157 6922 * * 50 63 4540 * 1460 652 * * 7133 2679 0 I 51 5328 6163 6516 2772 5466 * * 4548 3167 4850 5929 5619 6234 3545 3320 3848 3917 2557 4986 5687 51 37 5316 * 2064 394 * * 7133 2098 0 G 52 * * * * * 54 6473 * 6328 * 6234 * * * * * * * * * 52 0 * * * * * * 7133 0 0 F 53 * 6340 * * 2933 7128 6575 3795 6520 1969 5691 6886 * 5749 7214 * 5057 4520 2341 2502 53 0 * * * * * * 7133 0 0 F 54 4512 6449 * * 1475 * * 2716 * 5482 * * * * * * 6641 1395 * 5629 54 0 * * * * * * 7133 0 0 P 55 6383 * * * 6251 * 6459 * 6446 * * * 89 6388 * * * * * * 55 0 * * * * * * 7133 0 0 A 56 2127 4831 * 4633 5187 4433 6571 5363 3316 4859 6815 6561 6506 7198 4664 2112 3826 3962 * 6716 56 0 * * * * * * 7124 0 0 N 57 3141 * 5312 4774 * 5910 5718 6438 5969 * 6416 1686 6559 6089 4870 1941 3490 5599 6676 * 57 0 * * * * * * 7123 0 0 F 58 6416 3230 * * 1926 * 3801 5125 * 5909 6715 * * * 6422 7051 * * 6559 1114 58 0 * * * * * * 7123 0 0 V 59 5178 * * * 4444 * * 3533 * 1905 4613 * * * * * 4337 1051 * * 59 0 * * * * * * 7053 0 0 Q 60 4771 * 5130 1584 * * 4801 5797 2892 * 6644 * * 2782 3248 4684 3617 5672 6382 * 60 28 6474 6967 1585 585 * * 7081 1000 0 R 61 6652 * 5170 3077 4818 6512 5460 2577 3751 3056 * * 2386 5069 4048 4978 * 3333 * * 61 0 * * * * 0 * 7055 0 1000 L 62 6904 5378 * * 5080 * 6742 1971 * 2194 3055 * 5579 * * * 4696 2106 * 4538 62 67 4462 * 818 1208 * * 6972 2094 0 S 63 3372 * 4009 2333 * 4538 * * 3380 * * 4247 3483 5079 4845 2947 3332 4416 * 5550 63 0 * * * * * * 6839 0 0 G 64 3662 * 2112 2580 * 4148 6192 5899 3482 6418 * 5250 3297 5333 4139 4376 4635 4778 * * 64 62 4581 * 546 1666 * * 6783 1673 0 P 65 4431 * 5661 5990 * 5558 * 6054 3454 * 5963 4298 1356 * 4779 2502 3862 4283 * * 65 0 * * * * * * 6456 0 0 S 66 3788 * 2776 2563 * * * * * * * * 2471 3637 * 2507 2656 5872 * * 66 0 * * * * * * 6319 0 0 S 67 2284 * 4636 5161 * * * 4940 * * * 3192 5102 * * 1172 3162 * * * 67 0 * * * * * * 5872 0 0 G 68 * * * * * 0 * * * * * * * * * * * * * * 68 0 * * 0 * * * 4413 0 0 //