HHsearch 1.5 NAME c2dilA_ FAM FILE c2dilA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2dilA_.a3m DATE Wed Mar 10 12:09:56 2010 LENG 69 match states, 69 columns in multiple alignment FILT 119 out of 2688 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4722 1.7207 SEQ >ss_dssp CCCCSCCCCEEECCSCBCCSSSSSCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGCCBCCCSSCC >sa_dssp EEEEEEEDECBEADEECEBEEEEBCDACEBBEACBEEECEEDDCBADDEEEEADACCEDBDDEEEEEEE >ss_pred CCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCEEEECCCCCCC >ss_conf 987888734999960306887867107589989999947998399998995999962328996899886 >Consensus gxxxxxxxxxxxalxdyxxxxxxeLsxxxGdxixvlxxxxxxWxxxxxxgxxGxvPxxxvxxxxxxxxg >c2dilA_ GSSGSSGAQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSGPSSG >UniRef50_Q08CM7(162-219:469) Zgc:152911 n=4 Tax=Cyprinidae RepID=Q08CM7_DANRE E=8e-05 s/c=0.83 id=23% cov=81% -------TETYRCIANYETKDTKNRPFKveVDETVDVLIKDQKGWWLVENESKHlAWFPAPYLER------- >UniRef50_UPI0000E47B1C(230-298:1790) PREDICTED: similar to TUBA n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E47B1C E=5e-10 s/c=0.95 id=20% cov=100% -TSGATGERpKAKTLFPFSAERDCELSFMDGETIYLRERVDENWFEGELDGNVGLFPAEFVQIVVDIPPG >UniRef50_O15034(844-918:1052) RIMS-binding protein 2 n=24 Tax=Tetrapoda RepID=RIMB2_HUMAN E=8e-09 s/c=0.82 id=22% cov=97% -GAEELPARIFVALFDYDPltmspnpdAAEEELPFKEGQIIKVYgDKDADGFYRGETCARLGLIPCNMVSEIQADD-- >UniRef50_A9UUT1(400-457:528) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UUT1_MONBE E=5e-09 s/c=1.07 id=21% cov=84% -----------VAIVAFEPQGDRDLAFRPGQVVRLTKTDEHDWWWGAIGPQSGRFPSRCVTRLDQDLS- >UniRef50_A9VAA5(271-338:746) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VAA5_MONBE E=1e-07 s/c=0.85 id=23% cov=93% -EPDTSEGKVVVALYDNDPRGDMELSMRKDDYLLEL-RSDGAWVQCRHlmTNEEGFVPGTFVAPYKS---- >UniRef50_A9UUC6(243-310:1567) Predicted protein n=3 Tax=Fungi/Metazoa group RepID=A9UUC6_MONBE E=3e-06 s/c=0.78 id=24% cov=91% GELSIDPSMVFVVKHSFETSNAKQLSVVRGDILVIKTKHTNGWWLGCNiaNQAAGWLPGTFLTP------- >UniRef50_B7P1I5(452-515:1521) Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7P1I5_IXOSC E=8e-05 s/c=0.75 id=24% cov=90% -------GTTCVCVTEYQSPLTGHLALNCGDIVQVTEVTDTGMLEGRtRDGRQGMFPSAAIQEVKlrGPST- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4764 0 0 S 2 3885 5071 * 1963 * 3059 * * 5326 * 4974 * 3941 5057 * 1802 4044 5227 * * 2 0 * * * * * * 6039 0 0 S 3 3866 * 2781 5847 * 2545 * * 4607 5444 * 3950 2866 * * 2077 3407 * * * 3 0 * * * * * * 6527 0 0 G 4 3155 * 2636 4154 * 1204 5679 * 4358 5627 * * 5540 6075 * 3160 * * * * 4 0 * * * * * * 6618 0 0 S 5 2126 * 5122 4152 5935 5997 * 6030 4994 4171 * 3695 2963 6023 4777 2393 4389 4151 * * 5 22 6034 * 2000 415 * * 6819 1000 0 S 6 4327 * 4303 2689 * 3222 * * * 3190 5051 * 4850 4984 5188 1745 4535 4003 * * 6 0 * * * * * * 6872 0 0 G 7 3733 * 3844 4403 * 2156 * * * 6059 5558 6602 1596 6416 4983 3769 5325 3950 * * 7 0 * * * * * * 6908 0 0 A 8 4421 6482 4332 3601 6073 2130 5556 4778 3898 5030 6586 6246 6438 3604 6780 3041 3086 4963 * 6197 8 12 6975 * 1000 1000 * * 7022 1000 0 Q 9 5272 7045 5767 2536 6620 5979 4781 6494 2973 3860 5519 5603 5062 3071 2818 4395 4484 3938 * 6017 9 52 5120 7168 844 1175 * * 7050 2225 0 E 10 * * * 4358 * * 6734 4606 2237 3919 4053 * 5612 2974 2687 5473 3770 3241 * 4114 10 70 4404 * 1184 837 0 * 7095 2569 1000 Y 11 2227 3486 * * 3574 4715 5037 5933 * 4417 4436 * * * * * * 1879 * 2613 11 41 5826 6611 2391 305 * * 7106 1726 0 R 12 5665 6935 * 5802 6605 * * 3791 2580 4905 6695 7037 * 3143 2000 6758 4483 2211 * 5600 12 0 * * * * 0 * 7086 0 1000 A 13 857 3710 * * * 5094 * 6281 * * 5552 * * * * 4748 4373 2169 * * 13 23 5962 * 1266 775 * * 7112 1720 0 L 14 6959 * * 6090 * * * 2607 4639 1387 3855 6780 * 5668 6563 4898 4532 2283 * * 14 0 * * * * * * 7120 0 0 Y 15 3808 4570 * 4457 2672 * 3248 * 4791 5644 5286 5861 * 4937 4356 5812 6611 4471 5808 1702 15 0 * * * * * * 7128 0 0 D 16 3527 * 1200 4947 * 5618 5311 * * * * 3588 3316 5748 5371 2832 4911 * * * 16 15 6618 * 1000 1000 * * 7128 1000 0 Y 17 * 5960 * * 1343 * 3871 * * * * 5802 6580 * 6254 * * * 6284 1098 17 39 5215 * 378 2116 * * 7128 2241 0 T 18 4864 5196 2984 2522 6716 * 6110 4392 5256 5125 5432 3602 6695 3457 6621 4007 2642 4017 * 6526 18 0 * * * * * * 7128 0 0 A 19 1491 * * 7068 * 3070 * * 4540 6736 * 6436 2063 6894 5867 3188 4029 5808 * * 19 28 5692 * 2795 224 * * 7128 1605 0 Q 20 4224 6286 4234 3466 * 5635 5874 6962 3129 * 5674 4009 4420 3517 3175 2564 3735 4062 * * 20 81 4191 * 1642 557 * * 7128 3028 0 N 21 4438 * 2418 3073 6613 2908 5312 6131 5352 4326 6929 3007 * 6695 4704 3511 4790 3966 * 5488 21 13 6776 * 2807 222 * * 7128 1000 0 P 22 3313 * 2783 2842 6668 4883 5468 5712 4534 6282 7140 6632 2179 4721 5507 3465 4001 5490 * * 22 0 * * * * * * 7128 0 0 D 23 6192 6101 2244 2888 * 2968 5297 * 3760 * 6716 2924 6782 4349 5671 3619 3901 5567 * 6625 23 30 5612 * 1930 439 * * 7128 1767 0 E 24 4983 5060 3369 932 * 4885 4347 6763 6704 4753 6785 5384 * 3489 6668 * 5264 6782 * 6436 24 30 5590 * 1316 741 * * 7128 1682 0 L 25 * 5862 * * * * * 2584 6282 551 4153 * * * * * * 3960 * * 25 0 * * * * * * 7128 0 0 D 26 3755 7300 5046 4367 * 6693 7101 * 4068 * 6906 4608 3544 4892 4687 1160 3459 7179 * 6475 26 0 * * * * * * 7128 0 0 L 27 4819 6641 * * 1287 * * 3883 * 1865 5674 * * * * * * 2574 * 6064 27 0 * * * * * * 7128 0 0 S 28 4654 4766 5838 2943 5870 * 5282 6054 2108 5430 6364 4291 5410 3312 3118 4104 4837 4594 * 5274 28 0 * * * * * * 7128 0 0 A 29 3048 5534 5890 2901 * 5849 * 4550 2140 6567 * 6836 4219 3656 3103 4227 4911 3953 * * 29 19 6282 * 1000 1000 * * 7128 1000 0 G 30 5916 * 3052 6436 * 521 5384 * * 6776 * 3193 * * * * 6378 * * * 30 8 7532 * 0 * * * 7128 1000 0 D 31 4500 * 1057 1957 * * * * * * 7198 * * 2778 6062 5852 6128 5753 * * 31 0 * * * * * * 7128 0 0 I 32 5053 5589 6546 4554 5301 * 7140 2531 4446 3268 4758 6807 5377 4806 4858 5334 4505 1882 * 4050 32 0 * * * * * * 7128 0 0 L 33 * 5862 * * 3675 * * 1724 * 1826 5863 * * * * * * 1843 * 5389 33 12 6964 * 2322 322 * * 7128 1000 0 E 34 5426 * 3919 2585 3772 5729 5437 3258 4507 3204 7040 5793 * 5875 4045 6962 2949 3931 6767 4151 34 22 6073 * 617 1523 * * 7128 1782 0 V 35 5897 5704 6613 5296 * 6461 * 2255 * 1992 * 6540 * * * * * 1167 * * 35 48 5928 5955 2618 257 * * 7128 1566 0 I 36 4672 5089 6773 6256 6528 * 4448 3160 7027 1269 6467 * * 6011 5721 5455 3712 3181 6560 4254 36 86 4572 5962 1296 755 0 * 7119 3117 1796 L 37 4652 5561 3363 1966 6684 3761 6896 6490 3965 7692 * 3598 5064 4957 3988 2996 5881 5091 6924 5243 37 82 4179 * 564 1628 0 * 7126 3295 1714 E 38 6461 * 3246 3289 * 4485 4926 5481 2166 7042 4516 4934 5232 3640 3514 3923 4040 4235 * * 38 16 * 6526 * * * * 7128 0 0 G 39 6204 7111 3245 3180 7006 4431 3293 4282 6890 4856 5916 4003 3654 4176 5870 2868 4225 3735 * 5925 39 101 4031 7256 1144 869 0 * 7117 3694 1000 E 40 5272 5698 1860 2974 5769 4755 6151 5012 5273 7134 * 2695 4493 5714 5405 3308 4191 6375 6715 * 40 36 5703 7458 1368 707 0 * 7126 2201 1000 D 41 4571 * 2305 3042 6775 3418 6721 6563 3410 * 6790 4002 3798 5989 5054 2718 3876 6960 * * 41 52 5619 6059 1673 543 0 * 7133 1717 1000 G 42 5808 * 2441 3883 6853 1254 4794 * 6710 6472 * 3247 5639 5455 6086 5755 * * 5256 4730 42 22 6043 * 1863 464 0 * 7130 1679 1745 W 43 * * * * 4649 5551 * * * * 5573 * * 6064 5905 * 6093 4998 299 5204 43 0 * * * * * * 7128 0 0 W 44 4236 4699 * * 3542 6378 * 5275 6254 3168 3985 * * 5236 6613 4947 5878 4871 1253 4126 44 12 6932 * 0 * * * 7128 1000 0 T 45 * * 6378 3096 3991 6668 6475 4777 3283 2206 4303 5898 * 5267 3482 5818 4636 4271 3761 3951 45 15 6566 * 1000 1000 * * 7128 1000 0 V 46 2484 3490 * 6566 * 1228 * 4857 * 6536 * * * * 6254 * 6535 2149 * * 46 79 4229 * 699 1381 * * 7128 3423 0 E 47 4823 5035 6540 2458 * 5484 5096 3857 3158 7010 * 4859 * 3498 2489 4249 3691 4784 7026 5272 47 199 2960 * 877 1134 * * 7128 4792 0 R 48 3905 3668 6192 7035 5285 * 4369 3284 4171 3147 5883 3143 5561 6762 2967 4474 4984 3434 * 5037 48 282 2494 * 1641 558 * * 7128 5229 0 N 49 5122 5976 2386 4576 * 3075 4988 5491 4479 6763 * 2607 * 5590 3722 4137 2542 7279 * * 49 107 3800 * 984 1016 * * 7128 4134 0 G 50 6132 * 3248 4874 6704 1029 * * 5230 6762 * 3121 6725 4612 5784 3370 5426 * * 7083 50 13 6763 * 3000 193 * * 7128 1000 0 Q 51 5595 5956 5921 2921 * * 5148 6151 2159 5110 * 4000 * 3115 2124 4332 4558 5635 * * 51 57 4679 * 1090 915 * * 7128 2777 0 R 52 4495 6621 5676 3020 4997 * 6494 3896 3247 4425 5976 5183 6618 3204 3785 3221 3584 3510 * 5153 52 101 3880 * 1417 677 * * 7128 3371 0 G 53 5384 * * * 5621 114 * 6526 6540 * * * * * 6658 * * * * * 53 0 * * * * * * 7128 0 0 F 54 6910 5263 * * 2915 * 5580 3101 6878 2036 4707 * * 6868 5348 * 5074 4543 2396 3195 54 0 * * * * * * 7120 0 0 V 55 3683 6189 * * 1582 * * 2794 * 4260 * * * * * * * 1473 * 5810 55 0 * * * * * * 7120 0 0 P 56 * * * * * * * * 5372 5782 * * 115 5382 * * * 6566 * * 56 12 6871 * 1585 585 * * 7107 1000 0 G 57 1887 6702 * 4556 6072 4635 4952 5572 3226 4869 6617 * 5819 7020 3900 2364 3763 4120 * * 57 14 6701 * 2000 415 * * 7139 1000 0 S 58 3646 5510 4906 4466 6457 4904 6694 5521 7276 6608 6980 1885 5064 4489 6668 2152 3076 5638 * * 58 0 * * * * * * 7139 0 0 Y 59 6587 4419 * * 1889 * 3627 4435 * 4678 6702 5325 * * 5603 5936 6641 5315 * 1321 59 17 6457 * 0 * * * 7139 1000 0 L 60 4629 5440 * * 5338 * * 2889 * 2035 6096 * * * * * 4243 1104 * * 60 12 6877 * 1000 1000 * * 7139 1000 0 E 61 4972 6557 4579 1578 * 6797 6129 * 2186 * 6799 6732 * 2949 4276 4451 3905 6234 6337 * 61 0 * * * * * * 7108 0 0 K 62 3855 * 5394 3073 6984 6550 5836 3126 3146 3110 5966 * 2194 5323 4980 6503 6720 3366 * * 62 0 * * * * * * 7082 0 0 L 63 6994 5407 * * 4683 * 5923 2353 * 1799 3814 * * 6729 6912 5639 4289 2270 * 3996 63 0 * * * * * * 7082 0 0 S 64 4172 * 2484 3945 * 6502 * 6219 3075 6389 6479 4243 3132 3491 4911 3046 3365 5192 * * 64 24 5949 * 1000 1000 * * 6968 1000 0 G 65 3174 * 2933 2978 6043 3144 * 6265 3733 * * 3827 4731 5236 3724 2965 4018 6088 * * 65 39 5243 * 1432 668 * * 6851 1684 0 P 66 6310 * 3208 6151 * 6395 * 5134 3587 5405 * 5059 1698 * 3947 2488 3032 6116 * * 66 0 * * * * * * 6718 0 0 S 67 5120 * 2600 2859 * * 6190 * 3580 4826 * 4195 4900 3129 4341 2346 3516 * * * 67 28 5686 * 0 * * * 6594 1000 0 S 68 2051 * 4079 5689 * 5514 * * * * * 5411 2142 5778 5725 2061 2927 * * * 68 0 * * * * * * 6392 0 0 G 69 * * * * * 0 * * * * * * * * * * * * * * 69 0 * * 0 * * * 4385 0 0 //