HHsearch 1.5 NAME c2daeA_ FAM FILE c2daeA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2daeA_.a3m DATE Tue Mar 9 00:41:58 2010 LENG 75 match states, 75 columns in multiple alignment FILT 15 out of 19 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4021 -0.2653 SEQ >ss_dssp CCCSCCCCCCHHHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHHHHHHHHHTTTCCSSCCCCCCCCCCCCCC >sa_dssp EEEEEEDECCEECADCADEEBEDBCDEBABCBAEECDCEDECACDCAECBBDECEECEDDEEECEDECEEEEEEE >ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC >ss_conf 988765200599999999873434189999999824788899999996212530421466578886645443569 >Consensus xxxxxsxqxdxqxfheLkQkFPeVPdxVVsqcvxqNxxnxexCxxxLxqESxkyLYxEgxxxxxxxxxxxxxxnx >c2daeA_ GSSGSSGQIDFQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTRYLYGEGDLNFSDDSGISGPSSG >UniRef50_UPI0001793286(13-57:431) PREDICTED: similar to conserved hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793286 E=4e-09 s/c=1.39 id=45% cov=51% ----------MQMFHELKQQFPTVPDQVVSDCILKHSTNREACVSNL---------------------------- >UniRef50_C3YH59(6-69:735) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YH59_BRAFL E=6e-15 s/c=1.28 id=37% cov=87% ----ASSHGNLRMFEELCRRFQEVPQAVVVEVMRKNGSNFELCCQDLQQESGKYLY--GDFQSAGDNAMS----- >UniRef50_A7SCG6(21-78:402) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SCG6_NEMVE E=2e-13 s/c=1.32 id=39% cov=79% ----------------LQSRFPELPLDVIAKFLSQHAGNLEKCIVILSQESDKYLYGEDVVADSPTPVPVQPST- >UniRef50_UPI000186D84C(16-60:516) hypothetical protein Phum_PHUM268290 n=1 Tax=Pediculus humanus corporis RepID=UPI000186D84C E=2e-11 s/c=1.57 id=35% cov=61% ----------IQLFHELKQKYPTVPDQIVSKIIQKNCHDKSTCEAILEKENHAHL-------------------- >UniRef50_Q28WN5(108-147:857) GA20335 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q28WN5_DROPS E=5e-10 s/c=1.64 id=27% cov=55% ----------MHLFHEMKQEFPTIPDAIVTQCVSENCHQRENCIQMLKKE------------------------- >UniRef50_B0W159(48-86:407) Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W159_CULQU E=9e-09 s/c=1.57 id=44% cov=45% ----------MQLFHEMKQKFPTVPDHVVSDLVTANCHNRPAC-------------------------------- >UniRef50_A4IFZ0(7-142:573) Mitogen-activated protein kinase kinase kinase 7 interacting protein 3 like n=2 Tax=Danio rerio RepID=A4IFZ0_DANRE E=4e-27 s/c=0.48 id=54% cov=87% -------QLDYQILQDLRQRFPEIPETVVSQYLLQNNNNADLCYHLLAQESNRYLYEE--YHSPDDLHLN--RNH >UniRef50_UPI00016E3E46(5-178:675) UPI00016E3E46 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E3E46 E=4e-59 s/c=0.60 id=64% cov=92% -------RIDIQVLHDLRQKFPEVPEGVVSQCVLQNNNNLDACCEYLTQVSPVYLYSEdGNLGFADGHPSSRLCNH >UniRef50_B1ASY8(4-108:108) Mitogen-activated protein kinase kinase kinase 7 interacting protein 3 (Fragment) n=8 Tax=Mammalia RepID=B1ASY8_MOUSE E=4e-39 s/c=0.99 id=60% cov=91% ----NSPQLDIQVLHDLRQRFPEIPEGVVSQCMLQNNNNLEACCRALSQESSKYLYME--YHSPEDNRMN--RNR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 1000 0 0 S 3 * * * * * * * * * * * * * * * 0 * * * * 3 0 * * * * * * 1000 0 0 G 4 * * * * * 0 * * * * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 S 5 1440 * * * * * * * * * * 1735 * * * 1596 * * * * 5 0 * * * * * * 1679 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1720 0 0 G 7 * * * * * 2173 * * * * * * 1136 * * 1630 * * * * 7 0 * * * * * * 1720 0 0 Q 8 * * * * * * 2295 * * * * * * 556 3107 * * * * * 8 0 * * * * * * 2145 0 0 I 9 * * * * * 2295 * 1509 * 1575 * * * * * * * 3194 * * 9 0 * * * * * * 2145 0 0 D 10 * * 329 * * * * * * * * 2295 * * * * * * * * 10 0 * * * * * * 2145 0 0 F 11 * * * * 3264 * * 2347 * 2847 1509 3661 * * * * * * * 2945 11 0 * * * * * * 2667 0 0 Q 12 * * * * * * 1976 * * * * * * 721 2847 * * * * * 12 0 * * * * * * 2667 0 0 V 13 * * * * * * * 3793 * 1471 2124 * * * * * * 1567 * * 13 0 * * * * * * 2667 0 0 L 14 * * * * 761 * * * * 1287 * * * * * * * * * * 14 0 * * * * * * 2667 0 0 H 15 * * * 2847 * * 452 * * * * * * 2945 * * * * * * 15 0 * * * * * * 2667 0 0 D 16 * * 1862 761 * * 3661 * * * * 4170 * * * * * * * * 16 0 * * * * * * 2667 0 0 L 17 * * * * * * * * * 388 2085 * * * * * * * * * 17 0 * * * * * * 2843 0 0 R 18 * 3023 * * * * * * 1139 * * * * 3261 1651 * * * * * 18 0 * * * * * * 2843 0 0 Q 19 * * * * * * * * * * * * * 372 3023 3261 * * * * 19 0 * * * * * * 2843 0 0 K 20 * * * 2511 * * * * 1487 * * * * 3692 1357 * * * * * 20 0 * * * * * * 2843 0 0 F 21 * * * * 136 * * * * * * * * * * * * * * 3477 21 0 * * * * * * 2843 0 0 P 22 * * * * * * * * * * * * 189 3023 * * * * * * 22 0 * * * * * * 2843 0 0 E 23 * * * 744 * * * * * * * * * * * * 1312 * * * 23 0 * * * * * * 2843 0 0 V 24 * * * * * * * 1866 * 2570 * * * * * * * 844 * * 24 0 * * * * * * 2843 0 0 P 25 * * * * * * * * * * * * 0 * * * * * * * 25 0 * * * * * * 2843 0 0 E 26 * * 1312 1435 * * * * * 3261 * * * 3023 * * * * * * 26 0 * * * * * * 2843 0 0 V 27 2044 * 2517 * * 2854 4054 * * * * * * 2581 * * 3038 3390 * * 27 0 * * * * * * 2843 0 0 V 28 * * * * * * * 2313 * 3964 * * * * * * * 445 * * 28 0 * * * * * * 2843 0 0 V 29 * * * * * * * 3261 * * * * * * * * * 159 * * 29 0 * * * * * * 2843 0 0 S 30 3261 3828 * * * * * * * * * * * * * 925 2511 3023 * * 30 0 * * * * * * 2843 0 0 R 31 * * 2862 2370 * * * * 2365 * * * * 1398 3390 * * * * * 31 0 * * * * * * 2843 0 0 C 32 * 984 * * 3261 * * 3477 * 4054 * * * * * * * 3023 * 3095 32 0 * * * * * * 2843 0 0 M 33 * * * * * * * 2581 * 2176 1919 * * * * * * 1527 * * 33 0 * * * * * * 2843 0 0 L 34 * * * * * * * * * 1337 * 3058 * 2826 3023 2646 4054 * * * 34 0 * * * * * * 2843 0 0 Q 35 4054 * * 2511 * * * * 1785 * * * * 1077 * * * * * * 35 0 * * * * * * 2843 0 0 N 36 * * * * * * 2460 * * * * 289 * * * * * * * * 36 0 * * * * * * 2843 0 0 N 37 3261 1619 * * * 3023 * * 3828 * * 1740 * * * 3692 * * * * 37 0 * * * * * * 2843 0 0 N 38 * * * * * 3261 1619 * * * * 1740 * * * 2370 3692 * * * 38 0 * * * * * * 2843 0 0 N 39 * * 2642 * * * * * * * * 590 * 2511 * * * * * * 39 0 * * * * * * 2843 0 0 L 40 3927 * * * 3023 * * * 3477 1292 * * * * 1676 * * * * * 40 0 * * * * * * 2843 0 0 D 41 3828 * 1655 1114 * * * * * * * * 4054 * * 3477 * * * * 41 0 * * * * * * 2843 0 0 A 42 1357 * * * * * * * 3261 2059 * 2511 * * * * 3477 * * * 42 0 * * * * * * 2843 0 0 C 43 * 0 * * * * * * * * * * * * * * * * * * 43 0 * * * * * * 2843 0 0 C 44 * 1132 * 3367 * * * 1732 * * * * * * * * * 3674 * 3888 44 0 * * * * * * 2793 0 0 A 45 2340 * * 2952 * * 3040 * * * * * * 1633 4376 3674 * 3284 * * 45 0 * * * * * * 2793 0 0 V 46 4376 * 3011 * * * * 2325 * 3040 2334 3674 * * * * * 3313 * 2952 46 0 * * * * * * 2793 0 0 L 47 * * * * * * * * * 0 * * * * * * * * * * 47 0 * * * * * * 2793 0 0 S 48 2957 * * 3187 * * * * 2793 * * * * 2902 3822 1863 2860 * * * 48 0 * * * * * * 2741 0 0 Q 49 * * * * * * * * 1290 * * * * 758 * * * * * * 49 0 * * * * * * 2741 0 0 E 50 * * * 214 * * * * * * * * * * * * * 2860 * * 50 0 * * * * * * 2741 0 0 S 51 * * * * * * * * * * * 2860 * * * 214 * * * * 51 0 * * * * * * 2656 0 0 T 52 * * 2806 * * 2842 2860 * * * * 2512 2428 * * 3785 2774 * * * 52 0 * * * * * * 2656 0 0 R 53 2860 * * * * * * * 1216 * * * * * 1529 * * 3551 * * 53 0 * * * * * * 2656 0 0 Y 54 * * * * 3315 * 2860 * * * * * * * * * * * * 393 54 0 * * * * * * 2656 0 0 L 55 * * * * * * * * * 0 * * * * * * * * * * 55 0 * * * * * * 2656 0 0 Y 56 * * * * * * * * * * * * * * * * * * * 0 56 231 * 2758 * * * * 2390 0 0 G 57 * * * 3177 * 921 * * * * 3334 * * * * 1933 * * * * 57 0 * * * * * 0 2211 0 1000 E 58 * * * 0 * * * * * * * * * * * * * * * * 58 581 3036 2253 0 * 0 * 2211 1000 1000 G 59 * * 2297 * 2805 614 * * * * * * * * * * * * * * 59 0 * * * * * 0 2318 0 1255 D 60 * * 1837 3197 * * 2805 * * * * 3024 * * * 2820 * 2297 * * 60 223 * 2805 * * 0 * 2318 0 1255 L 61 * * * * 2668 * * * * 1739 * * * 2932 * * * 2376 * 2188 61 0 * * * * 0 * 2353 0 1000 N 62 2481 * * * * 3314 2453 * * * * 3597 3379 2758 * 2244 * * * * 62 0 * * * * * * 2390 0 0 F 63 * * 2481 * 2449 * * * * 2244 * * * * * 1229 * * * * 63 0 * * * * * * 2390 0 0 S 64 2009 * * * * * * * * * * * 1843 * * 1521 3006 * * * 64 0 * * * * * * 2390 0 0 D 65 * * 1022 2469 * 2758 * * * * * * 2481 * * * * * * * 65 192 * 3006 * * * * 2390 0 0 D 66 * * 814 3229 * 2939 * * * * * * * * * * 2366 * * * 66 0 * * * * * 0 2282 0 1000 S 67 * * * * * 3229 2939 * * 3202 * 1933 1753 * * 3388 * * * * 67 0 * * * * * 0 2282 0 1000 G 68 2586 * * * * 3388 3202 * * * * * 2939 * 1714 * * 2366 * * 68 0 * * * * * 0 2282 0 1000 I 69 * * * * * * * 2334 * 2215 1933 * 2366 * * 2939 * * * * 69 0 * * * * * 0 2282 0 1000 S 70 3283 * * * * * * * * * * 2293 * * * 1003 * 2366 * * 70 405 * 2030 * * * 0 2282 0 1000 G 71 * * * * * 1500 * * * * * * * 1852 2318 2565 * * * * 71 306 * 2387 * * 1446 660 1986 0 1521 P 72 * * * * * * * * * 889 * * 1120 * * * * * * * 72 0 * * * * 604 1548 1962 0 1298 S 73 * 2887 * * * * * * * * * * * * 949 1528 * * * * 73 0 * * * * 0 * 2171 0 1000 S 74 * * * * * * * * * * * 549 * * * 3232 2250 * * * 74 0 * * * * * * 2211 0 0 G 75 * * * * * 2844 448 * * * * * * * 2969 * * * * * 75 0 * * 0 * * * 1841 0 0 //