HHsearch 1.5 NAME c2csyA_ FAM FILE c2csyA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c2csyA_.a3m DATE Mon Mar 8 19:41:13 2010 LENG 81 match states, 81 columns in multiple alignment FILT 109 out of 4626 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.7 EVD 0.5175 2.4451 SEQ >ss_dssp CCCCCCCCSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCCSCCEECHHHHHHHSSSCSCCC >sa_dssp EEEEEEEEEEEDECCEEACCCEEEBEDACDBECECBBBDDBBEECDEECEEBDECDEEBEDECDEAEEBCCEDEEECEEEE >ss_pred CCCCCCCCCCHHCCHHHCHHHHCCCCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCC >ss_conf 987666764110150118774011102331565520456899999743787887870011401732999999998661688 >Consensus gxxgxxxxsdxxxxxxxCxICxxxxxxxvxxxCgHxfCxxCixxxxxxxxxCPxCrxxxxxxxxxxxxlxxxlxkxxpxeg >c2csyA_ GSSGSSGGSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKSGPSSG >UniRef50_B9WH73(395-465:494) RING finger domain-containing protein, putative n=4 Tax=Saccharomycetales RepID=B9WH73_CANDC E=9e-09 s/c=0.86 id=23% cov=81% ---------------YSCPICMNIAYKPIRLSCGHLFCVRCLVKMKQDDKTsCPLCRKENAILYADSSNLdlesMELMKKYFPRE- >UniRef50_UPI000186DC3D(26-90:429) RING finger protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DC3D E=1e-07 s/c=0.89 id=25% cov=80% -----------------CAVCLQTSVHPAELPCGHIFCYLCIKGIVNQGRRCAMCRQDIPNDYLDKPKLLKPVDTEYSSKG >UniRef50_A6RPX7(336-411:520) Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RPX7_BOTFB E=0.0001 s/c=0.62 id=22% cov=83% GGNEASTATKEGEL-LQCSICTEDFatgEDVRVLPCHHKYHPACIDPWLLNvSGTCPLCRHDLRPTATHAQ-------------- >UniRef50_A9RSS1(241-299:1452) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSS1_PHYPA E=0.0004 s/c=0.77 id=23% cov=70% -----------------CGLCKRLMLRPVVIDSGVSFCKGCIEEYLKCEKTiCPVTGRPVSRRFVVSVTLQDLI-------- >UniRef50_D1I7B3(176-227:232) Whole genome shotgun sequence of line PN40024, scaffold_150.assembly12x (Fragment) n=3 Tax=rosids RepID=D1I7B3_VITVI E=2e-06 s/c=1.03 id=25% cov=63% --------SEDEDVCPTCLDEYTPENPKITTQCSHHFHLGCIYEWMERSESCPICGKE----------------------- >UniRef50_Q6CMY9(73-155:656) KLLA0E16655p n=1 Tax=Kluyveromyces lactis RepID=Q6CMY9_KLULA E=5e-06 s/c=0.63 id=21% cov=99% -SMGTGNGTDDDDSSNVCLICAEKLHIIALSPCNHPTCHKCClrQRALYEKKQCLFCRSEVEDIIFTDkiKETYEHLDKKAKLE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 3421 * * * * 141 * * * * * * * * * * * * * * 1 0 * * * * * * 4485 0 0 S 2 3005 * 4073 2983 * 4040 * * 3133 2948 * * * * * 1738 3552 * * * 2 0 * * * * * * 5474 0 0 S 3 * * 2474 * * 4357 * * 4289 * 3522 3366 * 3232 4281 1831 4491 4251 * * 3 0 * * * * * * 5644 0 0 G 4 3387 * 4088 4333 * 699 * * * * * 4578 * * 4323 3503 * * * * 4 0 * * * * * * 5696 0 0 S 5 2344 * * 2696 * 3742 * * 3499 * 3803 * * 4662 5028 2486 2597 * * * 5 0 * * * * * * 5935 0 0 S 6 2273 * 4724 3205 * 2964 * 5411 4725 * * * * * 4630 1768 3486 4873 * * 6 0 * * * * * * 5990 0 0 G 7 * * 3041 3613 * 1670 4773 * 5079 3950 * 3299 * * * 2946 3057 * * * 7 0 * * * * * * 5990 0 0 G 8 3045 * 4999 4234 * 1899 * * 4632 * 4879 3628 4672 * 5269 2254 4886 4001 * * 8 0 * * * * * * 6074 0 0 S 9 3827 * 4559 4402 5240 5374 * * 5219 * * 3172 5050 3866 * 1295 3098 5144 * * 9 0 * * * * * * 6196 0 0 E 10 * * 1279 1848 * 5364 * * 5441 * * 5570 * 3008 6272 3536 * 5776 * * 10 27 5753 * 1585 585 * * 6424 1000 0 E 11 3937 * 2147 1538 * 4555 * * 3200 * 6006 5312 5565 3226 * 5352 5644 * * * 11 57 5452 5970 1000 1000 * * 6462 1000 0 E 12 4096 * 2247 1728 * 4014 * 5670 4715 * 5658 4666 * 3811 5423 5407 4553 3482 * * 12 25 5869 * 1000 1000 * 0 6415 1000 1000 E 13 5076 * 1603 2502 * 3880 5779 5605 5541 * 5408 5585 5782 4076 4611 4348 3471 5961 * 5768 13 158 5746 3552 1585 585 * 0 6415 1000 1000 I 14 5308 4309 5557 3209 5628 * 5483 2545 4364 3041 4986 4279 5736 5559 4823 3342 4502 3188 * * 14 80 5834 4772 2322 322 2286 331 6516 1000 2735 P 15 6083 3094 2984 4024 6563 3623 * 6788 4756 * * 4811 1811 4377 4105 3475 5284 * * * 15 133 4755 4298 1000 1000 1494 633 6488 1608 3125 F 16 4551 5758 4990 3240 1507 * * * 5934 3095 3690 5487 4645 * * 4967 5828 5130 * 3345 16 0 * * * * 269 2554 6607 0 3251 R 17 4906 * 4041 2805 * * 5302 3646 3401 5074 5121 4667 * 3802 2878 3245 3839 3963 * 5796 17 3 8753 * 2000 415 0 * 6712 1000 1000 C 18 * 30 * * * * * * * * * * * * * 5603 * * * * 18 0 * * * * * * 6787 0 0 F 19 3332 5212 6575 6496 4616 4621 5476 3724 6006 3784 5316 6893 1896 * 5897 2876 4304 4063 6897 6591 19 0 * * * * * * 6787 0 0 I 20 4475 6715 6111 5512 * * * 930 * 2865 4416 6345 * * * * 6624 2492 * * 20 0 * * * * * * 6787 0 0 C 21 6140 212 5348 4834 * * * * * * * 6257 * * * 5087 5603 * * * 21 58 5754 5603 0 * * * 6787 1608 0 R 22 4528 * 5923 5450 3865 5214 4786 4671 3143 1890 3600 5766 * 4167 4502 4783 4778 6692 6536 3849 22 14 6729 * 2322 322 * 0 6796 1000 1000 Q 23 5079 6562 2279 2260 5993 4687 5971 * 4120 5796 * 3885 * 3103 4073 3127 5409 * * 5837 23 12 6929 * 1585 585 * 0 6796 1000 1000 A 24 4073 4743 3728 3590 5057 6383 * 4752 5656 2622 5183 3586 2936 6033 5894 3827 5024 5634 6870 3644 24 50 4884 * 1717 523 * 0 6796 2604 1000 F 25 4776 6513 6740 4097 2667 6534 6078 3152 5698 2741 4156 * 4457 5394 5856 3990 5397 3954 6908 3081 25 91 4025 * 1841 472 * 0 6796 3215 1000 Q 26 4738 5010 4240 4199 4664 5803 5089 4235 2785 4863 * 4119 5314 4466 3726 3392 3817 3551 5201 5465 26 30 5618 * 2080 389 * 0 6787 1964 1000 N 27 6032 5461 2245 2498 5098 * 4963 4495 4367 6537 5738 2700 5474 4567 3414 5568 4703 6949 * 6590 27 60 4606 * 1965 427 * 0 6787 2960 1000 P 28 2741 4317 * 5839 * 4153 * 4069 6346 4258 * 6442 1208 5889 5856 5214 4458 4981 * 5653 28 32 5490 * 1244 791 * 0 6851 1999 1000 V 29 3955 4716 5317 5228 5795 5876 6561 2846 4386 4395 5184 * * 6112 4189 6591 3801 1430 * 6020 29 35 5839 7330 1285 762 * 0 6851 1537 1000 V 30 6013 5606 * 6778 4172 * * 2653 3763 2881 4545 * 6776 4719 4360 3811 3085 2472 * 5437 30 55 4737 * 0 * 1126 885 6859 2776 1554 T 31 5937 3897 * 6785 5555 5230 * 3267 6786 1793 4543 6946 6289 5545 * 4086 1892 5245 * 5790 31 11 7060 * 0 * 0 * 6849 1000 1000 K 32 4103 * 3679 3838 * 5651 7117 5776 3099 6519 * 4258 2049 3963 3939 3502 4316 4720 6267 6937 32 115 3708 * 707 1368 * * 6841 3416 0 C 33 * 152 * 5180 * * * * * * * * * * * 5708 4229 * * * 33 17 6403 * 0 * * * 6848 1000 0 R 34 6541 5554 5724 * 6260 952 4691 * 4843 4509 4450 3472 * 4554 4299 4560 6532 * 6779 6633 34 18 6339 * 0 * * * 6848 1000 0 H 35 * 6380 * * * 5466 212 * 6339 * * 5986 * 5142 * * * 5708 * 5236 35 61 4600 * 0 * * * 6848 2517 0 Y 36 6632 * 6017 7091 6034 4358 5499 3207 5206 3296 4790 4390 5100 5482 4288 2674 2547 3167 * 5794 36 28 5699 * 0 * * * 6848 1612 0 F 37 4322 4621 * * 968 * 5049 3766 * 3972 5734 * * * * 6640 5566 4826 * 2779 37 71 4389 * 0 * * * 6848 2578 0 C 38 * 361 6706 5804 * 5163 2779 * * * * * * * * 5604 * * * * 38 0 * * * * * * 6848 0 0 E 39 4142 6102 6938 3444 4204 6512 4464 4385 2814 4124 6026 4536 6844 4434 2863 3800 5473 4841 5425 3888 39 0 * * * * * * 6848 0 0 S 40 3831 5444 3332 3512 * 3713 4999 6523 3090 5559 6158 4316 3742 4128 3741 3567 4163 4850 5888 * 40 0 * * * * * * 6848 0 0 C 41 * 30 * * * * * * * * * * * * * 5604 * * * * 41 14 6721 * 0 * * * 6848 1000 0 A 42 3221 6522 * * 3793 6559 * 1494 * 1975 5316 * * * * 4706 * 3431 4900 * 42 51 4836 * 1671 544 * * 6879 2194 0 L 43 5415 * 3686 2923 6043 6450 5790 4032 3329 2844 4956 4245 * 3611 4078 6197 3845 4149 6583 4428 43 0 * * * * * * 6879 0 0 E 44 5292 * 3886 2623 * 4829 7210 6193 2815 4602 5891 3442 6842 4201 2672 4438 3743 4461 * 6583 44 24 5909 * 2047 400 * * 6879 1668 0 H 45 3330 5092 * 6695 5914 * 3921 4350 * 4200 3996 4839 6193 * 4518 4184 4693 5013 1819 3152 45 60 4917 7041 1424 673 * * 6879 2235 0 F 46 5476 * * 6643 3101 * * 3049 5895 1513 3947 6117 * 5157 6775 4786 * 3469 3744 4461 46 62 4836 7170 825 1199 * 0 6875 2494 1000 R 47 3997 * 3419 2613 6770 5681 5864 4942 2908 4293 6551 4080 5655 3170 3489 4288 4888 6387 * 5009 47 58 4666 * 1227 804 945 1058 6876 2658 1523 A 48 3913 5734 4804 3983 5180 5111 5232 5260 2822 3925 6529 3606 * 3740 3033 3979 3556 4822 * 5287 48 91 4030 * 1082 922 * 0 6880 3279 1000 T 49 7318 6513 4126 3752 5701 5721 3553 4795 2469 * * 3102 * 3685 3212 2664 4585 6691 * * 49 44 5058 * 1173 846 * 0 6880 2212 1000 P 50 4845 * 4400 4724 4998 3608 5878 6448 3124 4938 5062 3022 2702 3683 3770 3784 7099 5358 6533 5795 50 168 3187 * 1844 471 0 * 6880 4316 1000 R 51 5758 5363 5260 3956 3963 4929 5241 6519 3201 3926 * 3986 * 4241 3093 3499 2339 4693 * * 51 120 3650 * 1719 522 * * 6879 3913 0 C 52 * 37 * * * * * * * 5301 * * * * * * * * * * 52 0 * * * * * * 6879 0 0 Y 53 4818 * * * 6638 * 6450 * 6193 4000 4774 * 361 * * * 6706 5301 * 5917 53 16 6536 * 2000 415 * * 6879 1000 0 I 54 5080 5049 6843 * 4091 * 4441 2178 5192 3047 4420 7109 * 4440 * 4862 3396 2235 * 5993 54 0 * * * * * * 6879 0 0 C 55 * 177 4069 * * * * * * * 5731 * * * * * 4750 * * * 55 65 4501 * 1748 510 * * 6874 3028 0 D 56 6587 * 5579 6674 6616 3340 6603 * 3303 6627 * 3016 * 4156 1056 3885 * * * * 56 62 4875 6987 1780 497 * * 6826 2011 0 Q 57 3618 * 5062 3024 * * 5722 * 2514 5584 6816 5620 * 2393 3558 3677 3260 4508 * 5652 57 83 4168 * 1213 815 * 0 7010 3045 1000 P 58 4638 5365 3314 2618 6602 * 5966 4144 4457 6351 * 4382 1693 4877 4404 * 4087 5442 * 6477 58 114 3872 7085 1322 737 0 * 7162 3298 1000 T 59 4803 * * * 4500 6677 * 2132 5459 2839 4701 5631 5930 6336 * 6566 2269 2445 * 5030 59 167 3329 6678 1329 732 * 0 7210 3874 1000 G 60 * * 5627 3295 6570 3896 4456 5136 2765 3054 * 3101 6291 5018 3666 2783 5080 5330 * 5648 60 47 5618 6404 956 1045 * 0 7175 1675 1597 G 61 4141 * 3340 5042 * 2067 4195 6330 4617 * 6587 3788 4920 3365 3804 2815 5725 6314 * 6685 61 0 * * * * 1462 650 7216 0 2042 I 62 4350 5474 4336 * 4705 * 6602 2669 5397 3434 6376 5604 4112 5537 4458 4039 3043 2407 5769 6593 62 136 3873 5532 1747 510 * 0 7197 3321 1568 F 63 3024 5565 5715 4054 2588 * * 3462 5647 2380 5412 3957 5008 * 6335 6512 4983 4403 * 3533 63 86 4393 6572 1630 563 907 1100 7217 2648 2552 N 64 6377 * 4281 5427 5350 * * 5425 2641 4307 6337 2770 4803 3562 3452 3709 3410 3983 * 4319 64 62 4562 * 2181 360 570 1616 7245 1920 1989 P 65 4130 * 5341 * 6733 * 6384 3209 3993 3683 6589 5539 2343 * 5677 4638 2770 2565 * 4518 65 31 5562 * 2512 278 * 0 7238 1666 1000 A 66 2800 5017 2336 * 5109 * * 4150 5254 3973 * 3316 2923 6433 6290 3036 5011 5629 6714 6269 66 39 5244 * 1303 750 * 0 7190 1684 1000 K 67 5679 * 4332 3573 6191 6272 * 5749 2046 3812 6132 4358 4893 2999 3819 3668 4466 4291 * 5603 67 48 5535 6529 2447 292 * 0 7170 1544 1000 E 68 5334 * 3790 2310 * 6796 6393 6210 2844 3970 * 2893 5243 4989 4386 4163 3904 4389 * 4236 68 0 * * * * 0 * 7319 0 1590 L 69 5147 * * 4731 * 6076 * 2717 5752 1151 4668 5619 * 4891 5286 6091 4235 3163 * * 69 29 * 5643 * * * * 7319 0 0 M 70 4677 6300 4478 4043 4702 * 5092 3279 * 2950 5211 3778 * 2617 4026 6428 5869 2766 * 4555 70 0 * * * * * 0 7189 0 1000 A 71 3134 * 3101 2454 * 5933 5968 3626 2228 6232 * 4347 * 3665 4510 4986 4521 * * * 71 0 * * * * 0 * 7182 0 1000 K 72 5229 * 6147 4010 3887 5136 4531 3770 2713 3175 6177 5320 5211 2992 3667 5329 * 3864 * 4119 72 23 5969 * 1000 1000 * * 7223 1000 0 L 73 5377 * * 4866 5926 6171 * 2575 5783 1002 5979 * * * 5215 5137 * 2689 * * 73 0 * * * * * * 7207 0 0 Q 74 5360 * 3875 2508 * * * 5817 1797 6101 * 3604 4597 2376 4244 6286 * * * 5071 74 0 * * * * * * 7083 0 0 K 75 * * 4361 3828 * * 5346 * 1213 * * 4285 5891 2900 2975 * 4850 4034 * * 75 0 * * * * * * 7017 0 0 S 76 4547 * 4211 3151 * * 5624 5124 3306 2253 2938 4625 * 4167 5119 4908 3574 5662 4706 * 76 0 * * * * * * 6906 0 0 G 77 2406 4278 * 4353 2454 3239 5374 5582 5374 4155 * * * 3904 4483 3521 * 4231 * 4464 77 0 * * * * * * 6769 0 0 P 78 2830 * * 4404 * * * * 4369 * * * 629 5386 * 3863 5365 * * * 78 0 * * * * * * 6691 0 0 S 79 2513 * 3527 3891 * 5023 5170 * 4902 3897 * 2871 * * 3962 2608 3169 4819 * * 79 0 * * * * * * 6320 0 0 S 80 3198 * * 877 * * 4771 * 3470 * * * * 5070 4665 3168 * * * 4670 80 0 * * * * * * 5973 0 0 G 81 * * * * * 0 * * * * * * * * * * * * * * 81 0 * * 0 * * * 4189 0 0 //