HHsearch 1.5 NAME c2cq7A_ FAM FILE c2cq7A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2cq7A_.a3m DATE Wed Jan 9 15:47:44 2013 LENG 49 match states, 49 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.6 EVD 0.5052 2.5545 SEQ >ss_dssp CCSSCCSCCSCCCSSSSHHHHHTTTCTTSSSSSSTTHHHHSCSSSCSCC >sa_dssp EEEEEEEEDEDEDECEDADECCEEDCCEDEEADDDACBBCECEEEEEEE >ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCC >ss_conf 9877768540331115808999861888778971898202305788889 >Consensus xxxxxTNpCxyxDxfsNCxxLkxxxgCxxxxVKxxCpASCxCxnxxxxx >c2cq7A_ GSSGSSGSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCESGPSSG >UniRef50_UPI0000F2C236(207-245:248) PREDICTED: similar to autoantigen 1 n=2 Tax=Mammalia RepID=UPI0000F2C236 E=0.0001 s/c=1.22 id=35% cov=82% -----TNPCAYADDAGNCPDAISSLGCHHKLVAKSCKASCKCTT----- >UniRef50_Q91055(202-239:242) Helothermine n=15 Tax=Scleroglossa RepID=HELO_HELHO E=0.0003 s/c=1.21 id=41% cov=76% -----TNPCKQNDVYNNCPDLKKQVGCGHPIMKD-CMATCKC------- >UniRef50_UPI0000F2C235(207-244:247) PREDICTED: similar to chondroitin sulfate proteoglycan 5-II n=1 Tax=Monodelphis domestica RepID=UPI0000F2C235 E=0.0005 s/c=1.20 id=43% cov=71% --------CLYTNKFGNCEEMKNKVSCRNKYVKSNCKATCLC------- >UniRef50_UPI0001760F87(177-215:223) PREDICTED: similar to natrin n=1 Tax=Danio rerio RepID=UPI0001760F87 E=0.0006 s/c=1.17 id=38% cov=82% -----TNACPYINGFVNCDALKAKLTCENTAVKLGCPASCLCDN----- >UniRef50_P54108(204-242:245) Cysteine-rich secretory protein 3 n=52 Tax=Euteleostomi RepID=CRIS3_HUMAN E=1e-08 s/c=1.56 id=48% cov=82% -----TNGCKYEDLYSNCKSLKLTLTCKHQLVRDSCKASCNCSN----- >UniRef50_Q8JI39(199-237:240) Triflin n=47 Tax=Sauria RepID=CRVP_TRIFL E=1e-08 s/c=1.56 id=32% cov=82% -----TNPCTRENEFTNCDSLVQKSSCQDNYMKSKCPASCFCQN----- >UniRef50_Q6P303(201-240:244) Cysteine-rich secretory protein 3 n=6 Tax=Xenopus RepID=Q6P303_XENTR E=1e-07 s/c=1.44 id=38% cov=82% -----TNPCPYEDQYSNCDDLASGDQCDTyQIVKEGCPGSCLCKN----- >UniRef50_A4PIZ5(211-254:257) Cysteine-rich secretory protein-buccal gland secretion n=1 Tax=Lethenteron japonicum RepID=A4PIZ5_LAMJA E=3e-07 s/c=1.28 id=35% cov=82% -----TNPCPYVDQFSNCPQLFSAHGCANDgaggtFVQTNCPATCSCTT----- >UniRef50_UPI00017B4D5B(190-228:231) UPI00017B4D5B related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B4D5B E=0.0003 s/c=1.18 id=38% cov=59% ----------------NCATLKAWFGCSNRLVSAWCPASCQCST----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * 1000 * * 1000 * * * * * * * * * * * * * * 1 0 * * * * * * 1134 0 0 S 2 * * * * * * * * 1000 * * * * * * 1000 * * * * 2 0 * * * * * * 1134 0 0 S 3 * * * * * 1000 * * * * * * * * * 1000 * * * * 3 0 * * * * * * 1134 0 0 G 4 * * * * * 1000 * * * 1000 * * * * * * * * * * 4 0 * * * * * * 1134 0 0 S 5 * 1000 * * * * * * * * * * * * * 1000 * * * * 5 0 * * * * * * 1134 0 0 S 6 * * * * * * * * * * * * * * * 3540 130 * * * 6 0 * * * * * * 2859 0 0 G 7 * * * * * 3540 * * * * * 130 * * * * * * * * 7 0 * * * * * * 2859 0 0 S 8 2547 * * * * 3799 * * * * * * 710 * * 2778 * * * * 8 0 * * * * * * 2859 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 2867 0 0 Q 10 3528 * * * * * * * 1418 3690 * * 2053 2897 * * 3533 * * * 10 0 * * * * * * 2867 0 0 Y 11 * * * * * * * * * * * * * 3596 2608 * * * * 409 11 0 * * * * * * 2867 0 0 Q 12 3528 * * 2089 * * * 3731 3728 * * 3596 * 2294 * 3687 3690 3544 * * 12 0 * * * * * * 2867 0 0 D 13 * * 394 * * * * * * * * 2064 * * * * * * * * 13 0 * * * * * * 2867 0 0 L 14 * * 2624 3533 * 3731 * * 2688 1875 * * * 2593 * * * 3596 * * 14 0 * * * * * * 2867 0 0 L 15 3528 * * * 1065 * * * * 2294 * * * * * * * * * 2112 15 0 * * * * * * 2867 0 0 S 16 * * * * * 2096 * * * * * 3596 * * * 939 3533 3731 * * 16 0 * * * * * * 2867 0 0 N 17 * * * * * * * * * * * 0 * * * * * * * * 17 0 * * * * * * 3094 0 0 C 18 * 0 * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 3094 0 0 D 19 4034 * 1570 3644 * * * * 3008 * * * 1991 3739 * * * 3808 * * 19 0 * * * * * * 3094 0 0 S 20 2834 * 2010 3644 * * * * * * * 3966 * 3592 * 1628 4034 * * * 20 0 * * * * * * 3094 0 0 L 21 3553 * * * * * * * * 260 3644 * * * * * * * * * 21 0 * * * * * * 3094 0 0 K 22 2695 * * * 3592 * * 3553 926 * * * * 3966 * * * 3520 * * 22 0 * * * * * * 3094 0 0 N 23 2944 * * 3808 * * * * 2659 4050 3966 2465 * 3520 * 2013 * * * * 23 0 * * * * * * 3094 0 0 T 24 3592 * * * * 3652 * * 1702 3966 * * * 2659 * 3553 2631 * 4034 * 24 0 * * * * * * 3094 0 0 A 25 3306 * 3652 * 2999 * 3592 * * 1807 * * * * * 3520 3739 2613 * * 25 0 * * * * * * 3094 0 0 G 26 * * * * * 1066 * * 3739 * * * * 3652 * 2581 2317 * * * 26 0 * * * * * * 3094 0 0 C 27 * 0 * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 3094 0 0 E 28 3592 * 3652 2556 * 3583 3553 * 4050 * * 3808 * 2625 3644 2999 * * * * 28 0 * * * * * * 3094 0 0 H 29 * * 3520 * 3808 * 1343 * * * * 1772 * * * * 2695 * * * 29 120 3652 * 0 * * * 3094 1000 0 E 30 * * 3592 2506 * * * * 2598 * * 3520 2691 2837 4034 3966 3859 * * * 30 125 3592 * 2322 322 * * 3094 1000 0 L 31 2834 * * * 3592 * * 2617 * 1428 * * * * * * * * 3739 2581 31 0 * * * * * * 3094 0 0 L 32 * * * * * * * 3739 * 3306 2551 * * * * * * 614 * * 32 0 * * * * * * 3094 0 0 K 33 3553 * * * * * * * 646 * * * * 3592 2924 4034 * * * * 33 0 * * * * * * 3094 0 0 E 34 4034 * 2798 1988 * * * * 2745 3859 * * * * * 2047 3592 * * * 34 126 * 3583 * * * * 3094 0 0 K 35 * * * * * 2609 * * 1454 * * 1999 * * * 2666 * * 3979 * 35 0 * * * * 0 * 3054 0 1000 C 36 * 0 * * * * * * * * * * * * * * * * * * 36 0 * * * * * * 3094 0 0 K 37 * * * * * * * * 1329 * 3583 * 948 * * * * * * * 37 0 * * * * * * 3094 0 0 A 38 120 * * * * 3652 * * * * * * * * * * * * * * 38 0 * * * * * * 3094 0 0 T 39 * * * * * * * * * * * * * * * 616 1525 * * * 39 0 * * * * * * 3094 0 0 C 40 * 0 * * * * * * * * * * * * * * * * * * 40 0 * * * * * * 3094 0 0 L 41 * * * * 2625 * * * 2104 1602 * 4050 * 2916 * 3592 * * * * 41 0 * * * * * * 3094 0 0 C 42 * 0 * * * * * * * * * * * * * * * * * * 42 0 * * * * * * 3094 0 0 E 43 * * 3602 2726 * * 3547 * 3492 * * * * 3243 * 2152 1936 * * * 43 0 * * * * * * 2841 0 0 S 44 * * * * * * * * * * * 1001 * * * 2500 1627 * * * 44 0 * * * * * * 2841 0 0 G 45 * * * * * 0 * * * * * * * * * * * * * * 45 0 * * * * * * 1000 0 0 P 46 * * * * * * * * * * * * 0 * * * * * * * 46 0 * * * * * * 1000 0 0 S 47 * * * * * * * * * * * * * * * 0 * * * * 47 0 * * * * * * 1000 0 0 S 48 * * * * * * * * * * * * * * * 0 * * * * 48 0 * * * * * * 1000 0 0 G 49 * * * * * 0 * * * * * * * * * * * * * * 49 0 * * 0 * * * 1000 0 0 //