HHsearch 1.5 NAME c2a51A_ FAM FILE c2a51A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2a51A_.a3m DATE Wed Jan 9 19:39:41 2013 LENG 39 match states, 39 columns in multiple alignment FILT 113 out of 687 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.2 EVD 0.5717 2.9991 SEQ >ss_dssp CBCTTTCCBSSCTTTCCSCCCSSCTTTCCSSSCTTTSCC >sa_dssp EDADCBCDEECDCEEBEDEDDEAACDDECEECDCEEBEE >ss_pred CEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHCCCC >ss_conf 871235389620100789876300346799733210299 >Consensus irCxxCxxxGHxxxxCxxxxxxxCxxCgxxgHxxxxCPk >c2a51A_ LTCFNCGKPGHTARMCRQPRQEGCWNCGSKEHRFAQCPK >UniRef50_UPI00015B4808(503-541:1408) PREDICTED: hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B4808 E=9e-06 s/c=1.31 id=32% cov=97% -RCERCGSQSHVTADCSH-DEPKCFNCNKFGHIAKSCkePK >UniRef50_B2B822(349-387:479) Predicted CDS Pa_2_13040 n=3 Tax=Sordariomycetes RepID=B2B822_PODAN E=0.0001 s/c=1.23 id=30% cov=103% VECRKCNETGHFSKDCPSAGPRGCRNCGQEGHMSKECTE >UniRef50_UPI00015B472C(247-273:1441) PREDICTED: similar to copia-like retrotransposable element n=2 Tax=Nasonia vitripennis RepID=UPI00015B472C E=5e-05 s/c=1.81 id=32% cov=72% VRCYNCNEFGHYANKCTEPKRNKNHAC------------ >UniRef50_D1J0F0(646-686:686) Whole genome shotgun sequence of line PN40024, scaffold_32.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1J0F0_VITVI E=0.0001 s/c=1.16 id=32% cov=103% IQCYVCKRYGHLcCVDFPDiPRQASCYKCGHYGHLGSDCTK >UniRef50_C5L7H4(278-325:618) Zinc finger protein splicing factor, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5L7H4_9ALVE E=0.0001 s/c=0.99 id=32% cov=103% IRCGLCQAMGHHASQCPefnnvemsyKMADVKCDICGDKGHATIDCPQ >UniRef50_B4Q9K1(216-254:276) GD23229 n=2 Tax=melanogaster subgroup RepID=B4Q9K1_DROSI E=0.0001 s/c=1.22 id=32% cov=103% IKCWNCDESGHGYQNCLKTRRIFCYGCGTPEVYKPNCAK >UniRef50_Q6ZRZ8(437-478:483) cDNA FLJ45949 fis, clone PLACE7007973 n=2 Tax=Homininae RepID=Q6ZRZ8_HUMAN E=0.0006 s/c=1.07 id=32% cov=97% --CYQCGKPGHWKANCPYGPRgekpcTACPLCRKLRYWKENCPE >UniRef50_Q868Q7(235-272:298) Gag-like protein (Fragment) n=1 Tax=Anopheles gambiae RepID=Q868Q7_ANOGA E=0.0003 s/c=1.22 id=30% cov=95% -RCFRCLERGHMVRECQGTNRSSLCiRCGAANHKAVNC-- >UniRef50_UPI0000DB71F1(472-511:1016) PREDICTED: similar to CG9715-PA n=1 Tax=Apis mellifera RepID=UPI0000DB71F1 E=2e-06 s/c=1.35 id=32% cov=103% MKCTNCHQPGHQKHNCPEPYKPLRCYmCGIQGHIETRCPQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * 1053 * 2220 4386 * * * * * * 1969 * * 1 0 * * * * * * 5428 0 0 T 2 * * * 6413 * * * 4336 1930 * * * * 3254 1345 3826 3442 6016 * * 2 0 * * * * * * 5878 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 6227 0 0 F 4 * * * 6011 1600 5694 3873 * 5403 4409 * 6661 4955 5943 3878 4698 5817 * 4384 1912 4 0 * * * * * * 6227 0 0 N 5 6092 * * 4781 4690 6986 5589 4206 3556 4805 * 1665 * 5142 1957 5107 5892 4698 6943 6281 5 0 * * * * * * 6227 0 0 C 6 * 43 * * * * * * * * * * * * * * * * * 5092 6 18 * 6368 * * * * 6227 0 0 G 7 6684 * 4297 * 5129 1422 5103 * 3647 2919 * 3289 * 4497 4035 4591 * 7051 4998 6885 7 0 * * * * 0 * 6219 0 1000 K 8 4357 5691 4684 2482 * 3064 * * 2531 4879 6963 5196 * 2921 4639 2967 4925 5707 * * 8 0 * * * * * * 6227 0 0 P 9 5890 * 4363 3896 3826 6977 6828 4026 3515 4293 4557 * 3165 4100 4066 4397 3344 4304 6662 3295 9 0 * * * * * * 6227 0 0 G 10 5926 * 3753 4789 * 499 * * * * * 4559 * 6369 4305 4568 5786 * * * 10 21 6080 * 0 * * * 6227 1489 0 H 11 * * * * * * 52 * * * * * * * 6016 * * * * 5664 11 0 * * * * * * 6227 0 0 T 12 4424 * * 6765 4621 4850 3888 3065 3395 3081 5405 6410 5354 3827 3278 4616 4595 4028 4340 4556 12 29 5635 * 0 * * * 6227 1000 0 A 13 1981 5635 * 5809 6677 4578 5001 4593 3122 6772 6906 * 6330 4949 3817 2544 4267 3863 6638 4869 13 0 * * * * * * 6227 0 0 R 14 2438 * 5801 5635 4441 6748 5737 * 2403 5322 * 3746 5210 3817 2740 3995 6587 4381 5644 5267 14 0 * * * * * * 6227 0 0 M 15 4586 * 2133 2337 6704 6687 6550 * 4513 * 7031 2613 * 3507 5825 3301 5245 4503 * 6637 15 0 * * * * * * 6227 0 0 C 16 * 99 * * 5635 * * * * * * * * * * * * * * 4440 16 52 5730 5923 1585 585 * * 6227 1482 0 R 17 4978 5852 * 6766 * 6960 5632 * 3721 4361 * * 1182 4613 2664 5054 3352 * 6271 6845 17 100 4138 6658 1781 496 0 * 6221 3186 1650 Q 18 3501 * 3617 3191 6597 4423 4040 * 3106 4480 5322 3060 * 3747 5500 3802 4296 5239 5449 5129 18 137 4287 4668 2858 214 * 0 6215 2570 1000 P 19 3951 * 5389 5250 * 3727 * * 3035 5202 5243 6003 1347 4565 3136 5272 5422 6492 * 6795 19 206 3501 4480 2394 305 249 2657 6201 3330 3042 R 20 4380 * 3584 4081 6598 5077 6506 4758 2938 5502 5065 5928 3401 4177 1933 4580 5119 5042 * 6656 20 110 4517 5073 2158 366 2261 338 6202 2618 2458 Q 21 5295 * 4325 4429 * 5404 4763 6936 2641 4438 * 5493 4521 3833 2108 3358 3468 5238 6925 6308 21 128 3987 5536 2056 397 819 1207 6176 2982 2868 E 22 5106 4801 4163 4740 * 4131 * 3470 2881 4752 4134 4252 3287 3861 6129 3515 4188 3909 * 5813 22 240 3100 4765 2147 369 753 1299 6187 3996 2631 G 23 4034 4525 6462 5144 3265 4329 6719 5050 2812 3757 * 6822 4847 5958 2359 5038 3625 3803 * 6902 23 73 4339 * 2597 261 0 * 6173 3022 2618 C 24 5787 370 6499 6838 * 5997 * 6895 5936 7035 * * 6791 * 5242 5894 4372 6034 * 5361 24 40 * 5206 * * * * 6227 0 0 W 25 5168 2788 6688 * 3052 * 5075 6015 6223 3737 5752 4352 4306 6569 3821 6012 4830 6781 5177 1853 25 91 4028 * 1234 799 596 1564 6192 2951 2026 N 26 6362 5516 * 5385 4041 5539 4010 4077 2756 4698 5901 3089 * 4315 2125 4849 5723 5402 * 4038 26 174 3136 * 1519 619 0 * 6212 3917 1000 C 27 * 123 * * * 5859 * * * * * * * * * * * * * 3958 27 27 * 5766 * * * * 6227 0 0 G 28 5086 * * 5662 6645 901 5731 * 3154 5253 * 4805 * 4079 2974 6053 * * 6545 * 28 17 6402 * 0 * * 0 6206 1000 1386 S 29 5404 6739 4608 2785 * 4250 5628 4785 2762 5707 5441 4483 * 3095 3285 3195 4552 4392 * 5763 29 23 5990 * 0 * 0 * 6206 1527 1386 K 30 4622 * 6524 3555 4170 5018 * 4434 3380 3807 * 5291 3522 3670 4140 3105 3426 3671 * 5173 30 26 * 5781 * * * * 6227 0 0 E 31 6507 * 3824 4194 * 548 * * 6401 * * 5081 * * 4151 4354 4905 * * * 31 0 * * * * 0 * 6208 0 1472 H 32 * * * * * * 83 * * * * * * * * * * 4772 * 5717 32 0 * * * * * * 6227 0 0 R 33 4710 * 5769 6746 3290 6693 6670 3166 3126 2829 4097 6791 4892 4727 3824 5811 3395 4079 4297 6218 33 0 * * * * * * 6227 0 0 F 34 2035 * 5527 4351 5219 4191 6670 3486 3705 5048 5641 * * 6144 4237 2645 3387 4796 * 5716 34 0 * * * * * * 6227 0 0 A 35 2477 * 6832 5717 5120 6719 5625 5037 2526 * * 4445 4565 5197 2450 2652 5223 5012 * 6086 35 0 * * * * * * 6227 0 0 Q 36 4384 * 2048 3905 5854 4656 5025 5520 5362 5102 6890 2928 * 2945 4505 3280 4780 5178 * * 36 0 * * * * * * 6222 0 0 C 37 * 0 * * * * * * * * * * * * * * * * * * 37 31 5571 * 1000 1000 * * 6222 1388 0 P 38 5476 * 6010 * * * * * 6012 * * 5810 334 * 5161 6016 3446 * * * 38 0 * * * * * * 5837 0 0 K 39 * * * 1855 * * * * 1220 * * * * 2414 3229 * * * * * 39 0 * * 0 * * * 5326 0 0 //