HHsearch 1.5 NAME c1vx7c_ FAM FILE c1vx7c_ COM /bmm/www/servers/phyre2/HH/hhmake -i c1vx7c_.a3m DATE Sat Jul 19 11:46:59 2014 LENG 89 match states, 89 columns in multiple alignment FILT 20 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.3 EVD 0.4163 -0.2492 SEQ >ss_dssp CTTCTTHHHHTTCCSCSEECCTTTCSSCEETTTTEETTTCTTSSSCCCCTTCHHHHHTTSTTSSCCTTHHHHTTHHHHTCCTTCCCCCC >sa_dssp EEDDEDEDCEEEEEEEECDDBEDCEDEBCCDEEEDADCBBDDDEEDDDDEECEECCEEDDEEEEECEEDDEDEEEEEDEEEEEDEEEEE >ss_pred CCCCCCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >ss_conf 96665524330000565200111171056666644430368841112778341121220445125788887899986052347755789 >Consensus xxxxKGtxsfGkrxxKthtlCrrcGxrSfHxQKxxCascgypxakxRxynWsxKAxRRkTtGTGRmRylkxvxRrxkngFreGtxxxpk >c1vx7c_ GKAGKGTGSFGKRNGKTHFLCLRCGKRSYHLQKKKCASCGYPSAKKRRFNWSVKAKRRNTTGTGRCRYIKTLRRKLKNKFTEGSTPKPK >UniRef50_B8MMT0(71-145:153) 60S ribosomal protein L37 n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MMT0_TALSN E=4e-16 s/c=1.15 id=58% cov=85% -----------RRDGEGLFTNCQGRKRSFHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLKTVDRKFHNGFQTG-TPK-- >UniRef50_D1HIB2(62-149:156) Ribosomal protein L37 (Fragment) n=4 Tax=Magnoliophyta RepID=D1HIB2_VITVI E=5e-28 s/c=1.42 id=58% cov=100% -QMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACGFPSSRIRKYNWSVKAIRRKTTGTGRMRYLRHVPCRFKSNFREGTEAAPR >UniRef50_P49622(1-86:91) 60S ribosomal protein L37 n=76 Tax=Eukaryota RepID=RL37_CAEEL E=2e-15 s/c=0.97 id=56% cov=96% ----KGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFR-GTTPKPR >UniRef50_Q49I53(1-86:96) Ribosomal protein L37 n=1 Tax=Sterkiella histriomuscorum RepID=Q49I53_OXYTR E=4e-12 s/c=0.84 id=49% cov=94% ----KGAQSLGRRNNKTHTLSRVTGTQSWHKQKKRCASSGHGAGtKLRRYNWAKKAIRRRSQGTGRMSYLKHVQRRAKNGFREGTKAQ-- >UniRef50_B9RII7(65-152:162) 60S ribosomal protein L37, putative n=1 Tax=Ricinus communis RepID=B9RII7_RICCO E=2e-07 s/c=0.65 id=45% cov=85% --------------QKLGFLCNGLGNRKFWKEKEQdththfvsgvpaVASTFRSVARKRSYNWSVKAIRRKTTRTGRIRYLRHLPRRIKSGFREGTEAAL K >UniRef50_Q22C92(74-162:168) Ribosomal protein L37 n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22C92_TETTH E=1e-19 s/c=1.09 id=54% cov=100% -KMTRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDgWGQKVRDRKGQGTGRMRYMKTIARRAKNGFRSGTQAAPK >UniRef50_Q4P4Y4(49-121:125) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P4Y4_USTMA E=8e-18 s/c=1.25 id=58% cov=83% --------------TKTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRRAKNGFQTGSAGK-- >UniRef50_Q8SRH5(1-78:90) 60S ribosomal protein L37 n=2 Tax=Fungi/Metazoa group RepID=RL37_ENCCU E=5e-10 s/c=0.84 id=53% cov=87% ----KGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRNPG-SIKARRRRTIGTGRMRYMKRELRAAKNGHK-------- >UniRef50_A3CS13(1-53:60) 50S ribosomal protein L37e n=10 Tax=Archaea RepID=RL37_METMJ E=2e-05 s/c=0.95 id=51% cov=57% ----KGTPSMGKRQKRTHIACRRCGKISFHAQHKVCAACGFGkSRRIRSYRWTEK----------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 577 * * * * 1601 * * * * * * 2 0 * * * * * * 1552 0 0 A 3 1601 * * * * * * * * * 577 * * * * * * * * * 3 0 * * * * * * 1552 0 0 G 4 * * * * * 388 * * * * * * * * * * 2083 * * * 4 0 * * * * * * 1657 0 0 K 5 * * * * * * * * 116 * * * * * 3692 * * * * * 5 0 * * * * * * 2155 0 0 G 6 * * * * * 0 * * * * * * * * * * * * * * 6 0 * * * * * * 2155 0 0 T 7 3026 * * * * * * * * * * * * * * * 189 * * * 7 0 * * * * * * 2155 0 0 G 8 3345 * * * * 2779 * * * * * * 2239 2430 * 1954 3315 * * * 8 0 * * * * * * 2155 0 0 S 9 2836 * * * * * * * * * * * * * * 218 * * * * 9 0 * * * * * * 2155 0 0 F 10 * * * * 344 * * * * 3026 3480 * * * * * * * * * 10 0 * * * * * * 2155 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 2155 0 0 K 12 * * * * * * * * 429 * * * * * 1958 * * * * * 12 0 * * * * * * 2250 0 0 R 13 * * * * * * * * 2766 * * * * * 319 * * * 4284 * 13 0 * * * * * * 2250 0 0 N 14 * * 3488 * * * 1805 * * 4065 * 2057 * 3586 2050 * * * * * 14 0 * * * * * * 2250 0 0 G 15 * * * * * 3069 * * 2717 * * 1454 * 2461 * * 2856 4507 * * 15 0 * * * * * * 2633 0 0 K 16 * * * 3580 * * * * 388 * * * * * 2717 * * * * * 16 0 * * * * * * 2633 0 0 T 17 * * * * * 3580 * * * 2927 * 3630 * * * 2122 1076 * * * 17 0 * * * * * * 2633 0 0 H 18 * * * * * 2927 506 * * 3580 * * * * * * 3630 * * * 18 0 * * * * * * 2633 0 0 F 19 * * * 3630 1996 3551 * 3810 * * * * * * * * 966 * * * 19 0 * * * * * * 2633 0 0 L 20 3810 * * * * * * 5590 * 534 3630 * * * * * 3580 4244 * * 20 0 * * * * * * 2633 0 0 C 21 * 265 * * * * * * * * * 3580 * * * 3575 * * * * 21 0 * * * * * * 2633 0 0 L 22 * 3580 * * * * * * 4507 4815 * 2319 * * 952 * * 3065 * * 22 0 * * * * * * 2633 0 0 R 23 * * * * * 2927 * * * * * * * 3580 512 * * 3575 * * 23 0 * * * * * * 2633 0 0 C 24 * 512 * * * 3580 * * * 2927 * * * * * * 3575 * * * 24 0 * * * * * * 2633 0 0 G 25 * * * * * 212 * * * * * 4244 * * 3580 * * * * * 25 54 4763 * 5000 46 * * 2633 1000 0 K 26 4244 * * * * * * * 1434 * * 2716 * * 1799 4226 3575 * * * 26 0 * * * * * * 2633 0 0 R 27 4317 * * * * * * 3810 4226 * * * * 2602 837 3316 * * * * 27 0 * * * * * * 2633 0 0 S 28 3235 * * * * * * * 2927 * * * * * * 490 4317 * * * 28 0 * * * * * * 2633 0 0 Y 29 * * * * 822 * * * * 4763 * * * * * * * * 3575 1674 29 0 * * * * * * 2633 0 0 H 30 * * * * * * 203 * * * * * * * * * * * 2927 * 30 0 * * * * * * 2633 0 0 L 31 3810 * * * * * * 2110 1530 2798 * 4763 * * 4244 * 3546 4975 * * 31 0 * * * * * * 2633 0 0 Q 32 * * * 2927 * * * * * * * * * 203 * * * * * * 32 0 * * * * * * 2633 0 0 K 33 * * * * * * 3810 * 184 * * * * 4366 * * * * * * 33 0 * * * * * * 2633 0 0 K 34 * * * 2927 * * * * 1179 4317 * 3630 * * * 1757 * * * * 34 0 * * * * * * 2633 0 0 K 35 * * * * * * 4362 * 3393 * * * * 3220 1484 3669 2419 2991 * * 35 164 3220 * 3585 126 * * 2365 1000 0 C 36 * 164 * * * * * * * * * * * * * * * 3220 * * 36 0 * * * * * * 2365 0 0 A 37 398 * * * * 4280 * * * * * * * * * 2400 * * * * 37 0 * * * * * * 2365 0 0 S 38 2206 * * * * * * * 4261 * * 3265 * 4812 * 757 * * * * 38 0 * * * * * * 2364 0 0 C 39 * 291 * * * * * * * * * * * * * 3760 3201 * * * 39 0 * * * * * * 2364 0 0 G 40 3907 * * * 3201 385 * * * * * * * * * 4082 * * * * 40 0 * * * * * * 2364 0 0 Y 41 * * * * 2384 * 3760 * * * * * * * 3201 * * * * 676 41 0 * * * * * * 2364 0 0 P 42 * * * * * 3086 * * * * * * 478 4178 * 3201 * * * * 42 65 4506 * 0 * * * 2364 1000 0 S 43 1083 * 3039 * * * * * * * * 2960 * * * 2566 * 3201 * * 43 0 * * * * * * 2364 0 0 A 44 595 * * * * 3760 * * 4261 * * * 3650 * 3429 4658 * * * * 44 111 3760 * 0 * * * 2364 1000 0 K 45 * * * * * * * * 538 * * * * * 1684 * * * * * 45 0 * * * * * * 2364 0 0 K 46 * * * * * * * 2973 1727 2843 1977 * * * * * 2825 4797 * * 46 0 * * * * * * 2364 0 0 R 47 * * * * * * * * * * * * * * 0 * * * * * 47 0 * * * * * * 2364 0 0 R 48 * * * * * * * * 1913 * * 3650 * * 2400 1422 3443 * * * 48 0 * * * * * * 2364 0 0 F 49 * * * * 2669 * * * * * * * 3650 * * * * * * 390 49 0 * * * * * * 2364 0 0 N 50 * * 3912 4514 * 3650 4812 * * * * 453 * * 4506 * * * * * 50 228 3912 3650 0 * * * 2364 1000 0 W 51 * * * * * * * * * * * * * * * * * * 0 * 51 0 * * * * 0 * 2272 0 1000 S 52 3760 * * * * 2331 * * * * * * * * * 549 4506 * * * 52 0 * * * * * * 2364 0 0 V 53 2830 * * 2412 * * * 2960 2912 * * * * 3182 * * * 1737 * * 53 0 * * * * * * 2364 0 0 K 54 * * * * * * * * 0 * * * * * * * * * * * 54 0 * * * * * * 2364 0 0 A 55 191 * * * * * * * * * * * * * * 4158 * 3885 * * 55 0 * * * * * * 2321 0 0 K 56 * * * * * * * 1400 1217 5024 * * * * 2641 * * * * * 56 0 * * * * * * 2321 0 0 R 57 * * 3885 * * * * * * * * * * * 195 4090 * * * * 57 0 * * * * * * 2321 0 0 R 58 * * * * * * * * 4090 * * * * * 87 * * * * * 58 0 * * * * * * 2321 0 0 N 59 * * * * * * 4838 * 944 * * 3227 * * 1562 * * * * * 59 0 * * * * * * 2321 0 0 T 60 * * * * * 3885 * * * * * * * * * 3704 225 * * * 60 0 * * * * * * 2321 0 0 T 61 * * * * * * * 3433 * * * * * 2792 * * 390 * * * 61 0 * * * * * * 2321 0 0 G 62 * * * * * 164 * * * * * * * * 3215 * * * * * 62 0 * * * * * * 2321 0 0 T 63 4090 * * * * * * * * * * * * * * 4198 173 * * * 63 0 * * * * * * 2321 0 0 G 64 * * * * * 0 * * * * * * * * * * * * * * 64 0 * * * * * * 2321 0 0 R 65 * * * * * * * * * * * * * * 0 * * * * * 65 0 * * * * * * 2321 0 0 C 66 * 3210 * * * * * 3215 * 3311 672 * * * * * 4158 * * * 66 0 * * * * * * 2321 0 0 R 67 * * * * * * * * * * * * * * 175 3129 * * * * 67 0 * * * * * * 2321 0 0 Y 68 * * * * * * 2436 * * * * * * * * * * * * 295 68 0 * * * * * * 2321 0 0 I 69 * * * * * * * 4223 * 347 2641 * * * * * * * * * 69 0 * * * * * * 2321 0 0 K 70 * * * * * * * * 548 * * * * * 1867 4574 * * * * 70 0 * * * * * * 2321 0 0 T 71 * * 3418 * * * 1644 3455 * 4198 * 3111 * * 3433 * 2105 * * * 71 0 * * * * * * 2321 0 0 L 72 * * * 3433 * * * 3885 * 2632 * * * * * * * 560 * * 72 0 * * * * * * 2321 0 0 R 73 3885 * 3015 * * * 4735 * * 3433 * 4158 2197 3704 2734 3010 * * * 4232 73 0 * * * * * * 2321 0 0 R 74 4158 4582 * * * * * * * * * * * * 148 * * * * * 74 0 * * * * * * 2321 0 0 K 75 3433 4090 * * * * * * 2601 * * * * * 548 * * * * * 75 0 * * * * * * 2321 0 0 L 76 1562 * * * 1180 * * 3215 * 4223 4090 * * * * * * * * * 76 0 * * * * * * 2321 0 0 K 77 * * * * * * 3853 * 464 * * * * * 2280 * * * * * 77 0 * * * * * * 2321 0 0 N 78 * * * * * * 4232 * * * * 457 * * * 2742 3866 * * * 78 0 * * * * * * 2321 0 0 K 79 * 4724 * * * 258 * * 4223 * * 3786 * * * * * * * * 79 0 * * * * * * 2321 0 0 F 80 * * * * 141 * 3420 * * * * * * * * * * * * * 80 0 * * * * * * 2278 0 0 T 81 * * * * * * * * 2349 * * * * 2004 1009 * 4119 * * * 81 96 * 3962 * * * * 2278 0 0 E 82 * * * 703 * * * * * * * * * * * 3442 2038 4313 * * 82 0 * * * * 0 * 2185 0 1000 G 83 * * * * * 0 * * * * * * * * * * * * * * 83 200 * 2946 * * * * 2208 0 0 S 84 * * * * * * * * 3995 * * * * * * 1710 663 * * * 84 93 * 3995 * * 0 * 2155 0 1237 T 85 3051 * * 2236 * * * * 3405 * * * * 2788 * * 1532 3606 * * 85 0 * * * * 0 * 2208 0 1000 P 86 969 * * * * 3980 * * * * * * 1412 * * 4321 * * * * 86 0 * * * * * * 2209 0 0 K 87 1772 * * * * * * * 960 * * * * 3448 * * 3299 * * * 87 0 * * * * * * 2209 0 0 P 88 * * * * * * * * * 2848 * * 216 * * * * * * * 88 0 * * * * * * 1942 0 0 K 89 * * * * * * * * 687 * * * * * 1401 * * * * * 89 0 * * 0 * * * 1942 0 0 //