HHsearch 1.5
NAME  c1qjkA_
FAM   
FILE  c1qjkA_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c1qjkA_.a3m 
DATE  Thu Jan 10 04:09:57 2013
LENG  36 match states, 36 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.2 
EVD   0.5414  3.0680 
SEQ
>ss_dssp
CCCSCHHHHHTCCCSSCSSSHHHHCTTSSSSCSCCC
>sa_dssp
EEDEAEBCDEEEECDCEEEEBBEDBDCDEEEECDEE
>ss_pred
CCCEEEEECCCCEEEECCCCEEEECCCCCCCEECCC
>ss_conf
971799917886710047640450310167711369
>Consensus
pdvkcxccxxgkecacxgxxccitgxcckxgtccgi
>c1qjkA_
PDVKCVCCTEGKECACFGQDCCVTGECCKDGTCCGI
>UniRef50_O02033(4-40:68) Metallothionein n=9 Tax=Echinacea RepID=MT_LYTPI   E=0.0003 s/c=1.25 id=72% cov=100%
PDVKCFCCRDGKECACGGGECCITGKCCKEGdrTCCG-
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
P 1    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1195	0	0	

D 2    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1195	0	0	

V 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	3
       0	*	*	*	*	*	*	1195	0	0	

K 4    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1195	0	0	

C 5    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1195	0	0	

V 6    *	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	6
       0	*	*	*	*	*	*	1195	0	0	

C 7    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1195	0	0	

C 8    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1195	0	0	

T 9    *	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	1000	*	*	*	9
       0	*	*	*	*	*	*	1195	0	0	

E 10   *	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1195	0	0	

G 11   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1195	0	0	

K 12   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1195	0	0	

E 13   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1195	0	0	

C 14   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1195	0	0	

A 15   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1195	0	0	

C 16   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1195	0	0	

F 17   *	*	*	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1195	0	0	

G 18   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1195	0	0	

Q 19   *	*	*	*	*	1000	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1195	0	0	

D 20   *	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1195	0	0	

C 21   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1195	0	0	

C 22   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1195	0	0	

V 23   *	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	1000	*	*	23
       0	*	*	*	*	*	*	1195	0	0	

T 24   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	24
       0	*	*	*	*	*	*	1195	0	0	

G 25   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1195	0	0	

E 26   *	*	*	1000	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1195	0	0	

C 27   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1195	0	0	

C 28   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1195	0	0	

K 29   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	29
       0	*	*	*	*	*	*	1195	0	0	

D 30   *	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	30
       0	*	*	*	*	*	*	1195	0	0	

G 31   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	31
       1000	1000	*	1000	1000	*	*	1195	1000	0	

T 32   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	32
       0	*	*	*	*	*	*	1195	0	0	

C 33   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	33
       0	*	*	*	*	*	*	1195	0	0	

C 34   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	34
       0	*	*	*	*	*	*	1195	0	0	

G 35   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	35
       0	*	*	*	*	*	*	1195	0	0	

I 36   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	36
       0	*	*	0	*	*	*	1000	0	0	

//