HHsearch 1.5
NAME  c1qh2B_
FAM   
FILE  c1qh2B_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c1qh2B_.a3m 
DATE  Sat Jan 28 16:47:16 2012
LENG  28 match states, 28 columns in multiple alignment
FILT  4 out of 8 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.2 
EVD   0.5101  4.1678 
SEQ
>ss_dssp
CCSSSTTSSSSSSCCCCTTTCCCCSSCC
>sa_dssp
EEEEDAEECDEDDECECEEDEDEADCED
>ss_pred
CCCCHHCCCCCCCCEECCCCCEEECCCC
>ss_conf
9220100451113111016718843789
>Consensus
rictnccagxkgcxyfsxdgtficeges
>c1qh2B_
RICTNCCAGKKGCKYFSDDGTFICEGES
>UniRef50_Q9M514(14-41:143) Putative uncharacterized protein (Fragment) n=1 Tax=Capsicum annuum RepID=Q9M514_CAPAN  E=3e-07 s/c=2.01 id=86% cov=104%
RICTNCCAGRKGCNYFSDIGTFICEGES
>UniRef50_O49146(94-121:204) Wound-induced proteinase inhibitor 2 n=83 Tax=Solanaceae RepID=IP22_CAPAN  E=2e-06 s/c=1.93 id=83% cov=104%
RICTNCCAGRKGCNYYSADGTFICEGES
>UniRef50_Q43710(51-77:223) Proteinase inhibitor type-2 TR8 n=1 Tax=Solanum lycopersicum RepID=IP22_SOLLC  E=9e-06 s/c=1.91 id=82% cov=100%
-LCTNCCAGKKGCKYFSKDGTYICDGES
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
R 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	1
       0	*	*	*	*	*	*	1121	0	0	

I 2    *	*	*	*	*	*	*	463	*	1864	*	*	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1218	0	0	

C 3    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1218	0	0	

T 4    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	4
       0	*	*	*	*	*	*	1218	0	0	

N 5    *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1218	0	0	

C 6    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1218	0	0	

C 7    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1218	0	0	

A 8    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1218	0	0	

G 9    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1218	0	0	

K 10   *	*	*	*	*	*	*	*	982	*	*	*	*	*	1018	*	*	*	*	*	10
       0	*	*	*	*	*	*	1218	0	0	

K 11   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1218	0	0	

G 12   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1218	0	0	

C 13   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1218	0	0	

K 14   *	*	*	*	*	*	*	*	982	*	*	1018	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1218	0	0	

Y 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	15
       0	*	*	*	*	*	*	1218	0	0	

F 16   *	*	*	*	415	*	*	*	*	*	*	*	*	*	*	*	*	*	*	2000	16
       0	*	*	*	*	*	*	1218	0	0	

S 17   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	17
       0	*	*	*	*	*	*	1218	0	0	

D 18   2000	*	1073	*	*	*	*	*	1864	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1218	0	0	

D 19   *	*	403	*	*	*	*	2036	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1218	0	0	

G 20   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1218	0	0	

T 21   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	21
       0	*	*	*	*	*	*	1218	0	0	

F 22   *	*	*	*	463	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1864	22
       0	*	*	*	*	*	*	1218	0	0	

I 23   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1218	0	0	

C 24   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1218	0	0	

E 25   *	*	1864	463	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1218	0	0	

G 26   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1218	0	0	

E 27   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1218	0	0	

S 28   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	28
       0	*	*	0	*	*	*	1218	0	0	

//