HHsearch 1.5 NAME c1pxeA_ FAM FILE c1pxeA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1pxeA_.a3m DATE Sat Mar 13 03:41:26 2010 LENG 48 match states, 48 columns in multiple alignment FILT 88 out of 92 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.7 EVD 0.5124 3.7384 SEQ >ss_dssp CCCCSCCSSCCCCSTTTSCSSCCSSSSSCSCCCSSSSSSTTSSSCSCC >sa_dssp EDDDADCECBEBECBEDDEDEDBECCEBADDDDDECDBCDCCDEDDCE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >ss_conf 987579998673240257677541112266212230457643222029 >Consensus xexxCPtpGCxGxGHvxGxyxxHrsxxgCPxaxxxxxxxxalxxxxlk >c1pxeA_ RESKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRVPPEILAMHENVLK >UniRef50_Q4T9W0(24-65:1238) Chromosome undetermined SCAF7487, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4T9W0_TETNG E=9e-06 s/c=1.22 id=51% cov=85% QEQSCPTPGCSGSGHVSGRYSRHRSVLSCPiaRKHRLEEEEQ-------- >UniRef50_O60284(869-912:1047) Suppression of tumorigenicity 18 protein n=19 Tax=Euteleostomi RepID=ST18_HUMAN E=3e-05 s/c=1.13 id=51% cov=81% ----CPLPGCNGLGHVNNVFVTHRSLSGCPlnaqviKKGKVSEELMTI------ >UniRef50_UPI0000E499DB(489-532:939) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499DB E=0.0005 s/c=1.04 id=41% cov=92% -QSGCPTPGCNGVGHIKGAkYTGHHSAFGCPYSQMNMTKENTLHD---- >UniRef50_UPI0000E499DB(556-600:939) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499DB E=1e-13 s/c=1.72 id=48% cov=96% -EPKCPTPSCDGSGHVTGKYTSHHKTSGCPLAEKNQNKMPPTKEQV-- >UniRef50_Q9W4N4(838-875:942) CG32778 n=3 Tax=melanogaster subgroup RepID=Q9W4N4_DROME E=4e-09 s/c=1.65 id=53% cov=79% ---RCPIPGCDGSGHSTGKFLSHRSASGCPIANRNKMRVL-------- >UniRef50_UPI000186F3B1(356-393:907) peptidyl-prolyl cis-trans isomerase G, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F3B1 E=6e-08 s/c=1.54 id=38% cov=81% -ERKCPVEGCNSLGHFGGNYEKHFTVEACPLYHNKTPEE--------- >UniRef50_UPI000186CE0F(1147-1203:1522) myelin transcription factor 1, myt1, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CE0F E=8e-06 s/c=0.90 id=45% cov=92% --IQCPTNGCDGMGHMSGNYATHRrqdnkslfdyvhslKIICCPRADRSQIQ---AHSQELK >UniRef50_Q17LV8(569-598:766) Myelin transcription factor 1, myt1 n=2 Tax=Culicini RepID=Q17LV8_AEDAE E=2e-05 s/c=1.68 id=50% cov=58% ---QCQTPGCDGNGHIDGTFSTHRTTASCP------------------ >UniRef50_Q32NI4(420-462:668) MGC131153 protein n=2 Tax=Xenopus RepID=Q32NI4_XENLA E=1e-06 s/c=1.27 id=52% cov=56% ----CPIAGCTGIGHVRGsRYGTHYTAVGCP------------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * 2183 * * * * 2408 * * * * 1345 2339 * * * * * 1 0 * * * * * * 2011 0 0 E 2 * * 2716 513 * * * * * * * * * 3119 * 4959 * * * * 2 0 * * * * * * 2473 0 0 S 3 5698 * * * * 1869 * 2848 3826 2577 * 4636 4435 4556 2996 4102 * 5848 * * 3 0 * * * * * * 2697 0 0 K 4 * * * * * 3284 * * 1330 4325 * * * 3860 1884 4341 5564 4664 * * 4 29 5654 * 1000 1000 * * 2735 1076 0 C 5 * 0 * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 2781 0 0 P 6 * * * 4637 * * * * 5843 * * * 190 5120 * * 4758 * * * 6 0 * * * * * * 2783 0 0 T 7 * * * * * * * 3337 * 4035 6190 * * * * * 540 2849 * * 7 0 * * * * * * 2783 0 0 P 8 4103 * * 3685 * * * 5257 * 4637 6315 4705 553 * 5857 6193 * 4866 * * 8 0 * * * * * * 2783 0 0 G 9 * * 5226 * * 233 * * * 4637 6307 * * * 4869 6240 5494 * * * 9 0 * * * * * * 2783 0 0 C 10 * 0 * * * * * * * * * * * * * * * * * * 10 0 * * * * * * 2783 0 0 D 11 * * 1051 * * * 6182 * 4240 4637 * 2754 * 6458 3242 4751 3500 5659 * * 11 0 * * * * * * 2783 0 0 G 12 4637 * * * * 256 * * * * * * * * * 3030 * * * * 12 0 * * * * * * 2783 0 0 T 13 4889 * * * * * * 3257 4313 2819 4126 5020 * 4414 3458 1855 3714 3821 * 5626 13 0 * * * * * * 2724 0 0 G 14 * * * * * 0 * * * * * * * * * * * * * * 14 0 * * * * * * 2783 0 0 H 15 * * * * * * 0 * * * * * * * * * * * * * 15 0 * * * * * * 2783 0 0 V 16 3943 * * * 4980 * * 1623 6193 3787 4431 * * 6106 6771 4263 * 1433 * * 16 0 * * * * * * 2783 0 0 T 17 * * 5120 * * 4565 * * 2379 5326 * 2487 * 4256 4185 2705 1874 * * * 17 46 4987 * 1573 591 * * 2783 1313 0 G 18 5126 * * * * 239 * * * * * 4359 5792 6094 * 5032 6378 * * * 18 348 2223 * 0 * * * 2783 1993 0 L 19 6620 * * * * 6343 5792 * 1569 3113 6621 2155 * 5358 2826 4213 5120 5382 * * 19 15 6620 * 0 * * * 2783 1000 0 Y 20 * * * * 2109 * 4048 * * 5110 * * * * 3227 5494 * * * 863 20 0 * * * * * * 2783 0 0 P 21 2291 * 4214 3814 5647 4716 * 5938 * 4672 * 3930 4112 6350 6038 2784 2012 6257 * * 21 17 6380 * 0 * * * 2783 1000 0 H 22 5645 * 5494 * * 3313 3813 * 3318 * * * * * 4194 1669 1998 4347 * 5857 22 0 * * * * * * 2783 0 0 H 23 * * * * * * 0 * * * * * * * * * * * * * 23 0 * * * * * * 2783 0 0 R 24 * * * * 3317 * 2207 * * * * * * 5645 760 4864 * * * 4708 24 32 5506 * 3807 107 * * 2782 1000 0 S 25 * 6431 * 4864 * * * * 4323 5103 5922 * * 6376 4404 659 2592 * * * 25 0 * * * * * * 2782 0 0 L 26 2232 * * 5183 5575 * * 3423 * 1495 * * 5103 4160 * 4202 4311 3309 * * 26 0 * * * * * * 2782 0 0 S 27 5117 * * 3509 3062 5501 * 5506 4864 5242 * * * 4874 * 1005 * 3986 6171 4339 27 13 6760 * 0 * * * 2782 1000 0 G 28 3509 5506 * * 5324 482 * * * * * * * * * 3119 * * * 4864 28 0 * * * * * * 2782 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 2782 0 0 P 30 * * * * * * * * * * * * 0 * * * * * * * 30 83 4166 * 2245 342 * * 2782 1557 0 H 31 * * * * * * 4725 4519 4359 2165 4585 4614 * * 1688 * * * * 1976 31 0 * * * * * * 2664 0 0 K 32 1069 * * * * * * * 2567 * * * * * 4079 2273 * * * 3498 32 36 5325 * 0 * * * 2706 1076 0 D 33 4961 * 1654 3002 * 4900 3092 * 3984 5238 5804 4170 4889 4114 5663 5339 6347 3983 * * 33 0 * * * * * * 2696 0 0 R 34 * * * * * * * 4422 1515 5365 3614 4190 * * 1258 * * 5353 * * 34 0 * * * * * * 2728 0 0 V 35 3808 * * * 5349 5156 * * 4192 3301 5556 1274 * * 3962 3490 6137 3086 * * 35 0 * * * * * * 2890 0 0 P 36 * * * 4849 * 4526 * 5967 3268 3745 3139 * 3300 2896 * 3053 2318 4131 * * 36 0 * * * * * * 2925 0 0 P 37 * * * 3173 * * * 2720 2567 3867 4412 4168 2948 * 2984 4461 4489 4281 * * 37 0 * * * * * * 2925 0 0 E 38 4699 * * 1609 * * 5296 * 1796 * 5897 5925 * 3393 2792 4398 * * * * 38 105 5248 4513 0 * * * 2919 1000 0 I 39 * * * 1311 * 5029 * 2503 * 2553 2558 * * * * * * 4328 * * 39 0 * * * * * 0 2834 0 1000 L 40 4049 * * * * * * * 3967 1415 2930 4830 4647 3483 * 4696 5225 2840 * * 40 0 * * * * * 0 2685 0 1000 A 41 876 * * * * * * * * * * * 2921 4769 * * 2997 2633 * * 41 0 * * * * 0 * 2610 0 1000 M 42 2784 * * * * * * 3524 * 974 3128 * * * * 3818 3769 * * * 42 52 4820 * 0 * * * 2686 1000 0 H 43 * * * * * * 1321 * 2742 * * 3532 * 2251 4644 4707 * * * 3728 43 0 * * * * * * 2478 0 0 E 44 3821 * 2062 1242 * * 3728 * * * * * * 4644 * 2724 * * * * 44 0 * * * * * * 2478 0 0 N 45 4517 * 3196 4348 * 3912 * * * * * 2949 3141 1523 * * 2827 * * * 45 0 * * * * * * 2271 0 0 V 46 2571 * 4236 2067 * * * 3193 * * * * * * * * 2760 1821 * * 46 0 * * * * * * 2272 0 0 L 47 * * * * * * * * 3595 426 * * * * * 3206 * 3947 * * 47 0 * * * * * * 2187 0 0 K 48 * * * * * * * * 121 * * * * * 3636 * * * * * 48 0 * * 0 * * * 2039 0 0 //