HHsearch 1.5 NAME c1junB_ FAM FILE c1junB_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1junB_.a3m DATE Thu Mar 11 05:38:21 2010 LENG 43 match states, 43 columns in multiple alignment FILT 27 out of 31 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4542 1.7200 SEQ >ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >sa_dssp EEDEEEEEDDDEEEEEDDEEEEDEDCEEEEDDEDEEDEEEEEE >ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9516899999999996433789999999999999999998239 >Consensus xxxRIsrLEdkVKxLKxqNxeLxsxaxxLreqVxqLKQxVmxH >c1junB_ CGGRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNY >UniRef50_D1LWW3(233-272:287) AP1-like transcription factor n=2 Tax=Deuterostomia RepID=D1LWW3_SACKO E=9e-06 s/c=1.29 id=61% cov=95% ---RISRLEEKVDDLKNQNSDLSLSATQLREQVCKLKQQVMEH >UniRef50_UPI00003C0E84(211-250:264) PREDICTED: similar to c-Jun protein n=2 Tax=Apocrita RepID=UPI00003C0E84 E=0.0001 s/c=1.19 id=51% cov=95% ---RISRLEDKVKLLKGENSELSAVVHRLKEHVCRLKEQVMDH >UniRef50_P18289(236-275:289) Transcription factor AP-1 n=5 Tax=melanogaster subgroup RepID=JRA_DROME E=2e-11 s/c=1.76 id=51% cov=95% ---RISKLEDRVKVLKGENVDLASIVKNLKDHVAQLKQQVMEH >UniRef50_A7RIQ6(285-324:343) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RIQ6_NEMVE E=4e-08 s/c=1.48 id=51% cov=91% -----AELEDKVKVLKDKNTKLVSEAQELRRLVCELKEQVMNH >UniRef50_UPI000192560B(300-339:355) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI000192560B E=6e-08 s/c=1.47 id=51% cov=95% ---REETLKLKVKELKNKNSELTNLASKLRMQVCELKQQVMHH >UniRef50_C9E0F4(187-226:228) Putative transcription factor Ap-1 n=1 Tax=Artemia franciscana RepID=C9E0F4_ARTSF E=8e-08 s/c=1.45 id=54% cov=95% ---RIARLEEKVKQIKTENAELSIFAKRLRDDVESLKQEVQEH >UniRef50_UPI000179398A(222-261:273) PREDICTED: similar to c-Jun protein, partial n=3 Tax=Acyrthosiphon pisum RepID=UPI000179398A E=0.0007 s/c=1.13 id=39% cov=95% ---RIAMLADNIKVLKNENIVLTTELNSVLEQICQLKQTIVEH >UniRef50_A7RWP1(78-117:135) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RWP1_NEMVE E=2e-06 s/c=1.34 id=54% cov=95% ---REARLENRVKDLKERNIELNAVANALKQQVCDLKQRVMDH # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * C 1 * 0 * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 G 3 * * * * * 0 * * * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 R 4 * * * * * * * * * * * * * * 0 * * * * * 4 0 * * * * * * 2500 0 0 I 5 * * * 2937 * * * 202 * * * * * * * * * * * * 5 0 * * * * * * 2500 0 0 A 6 1137 * * 3871 * * * * * * * * * * * 1068 * * * * 6 0 * * * * * * 2550 0 0 R 7 * * * 4268 * * * * 2564 * 3121 * * * 747 * 3871 * * * 7 0 * * * * * * 2550 0 0 L 8 * * * * * * * * * 0 * * * * * * * * * * 8 0 * * * * * * 2550 0 0 E 9 3121 * * 292 * * * * 3871 * * * * * * * * * * * 9 0 * * * * * * 2550 0 0 E 10 * * 816 1822 * * * * * 3871 * 4209 * * * 5235 * * * * 10 0 * * * * * * 2550 0 0 K 11 * * * * * * * * 509 * * 3185 * * 2417 * * * * * 11 0 * * * * * * 2567 0 0 V 12 * * * * * * * 3185 * * * * * * * 4546 * 239 * * 12 0 * * * * * * 2567 0 0 K 13 * * 4875 4546 * * 4971 * 224 * * 4824 * * * * * * * * 13 0 * * * * * * 2567 0 0 T 14 3590 * 2791 3253 * * * 4978 * 3929 * 2882 * 4123 * 5603 3405 1931 * * 14 0 * * * * * * 2567 0 0 L 15 * * * * * * * 4123 * 85 * * * * * * * * * * 15 0 * * * * * * 2567 0 0 K 16 * * * 4546 * * * * 63 * * * * * * * * * * * 16 0 * * * * * * 2567 0 0 A 17 3424 * 4308 4259 * 2841 * * * * * 1847 * * * 2484 2267 * * * 17 0 * * * * * * 2567 0 0 Q 18 4546 * 4971 1530 * * * * 3091 * * * * 1289 4259 * * * * * 18 0 * * * * * * 2567 0 0 N 19 * * * * * * * * * * * 0 * * * * * * * * 19 0 * * * * * * 2567 0 0 S 20 2306 * * * * * * 2625 * 4824 * * * * * 1653 2399 3429 * * 20 0 * * * * * * 2567 0 0 E 21 * * 2478 726 * 4168 * * 4308 * * * * * * * * 3185 * * 21 0 * * * * * * 2567 0 0 L 22 * * * * * * * * * 0 * * * * * * * * * * 22 0 * * * * * * 2567 0 0 A 23 1697 4930 * * * 3298 * * * * * 4259 * * * 2300 2237 3479 * * 23 0 * * * * * * 2567 0 0 S 24 2900 * * * * 3841 * 4123 * 4875 * 3340 * * * 1087 2886 * * * 24 0 * * * * * * 2567 0 0 T 25 * * * 2640 4123 * * 3464 * 3903 * * * * * 3204 1606 2413 * * 25 0 * * * * * * 2567 0 0 A 26 591 * * * * * * * * 3185 * * * * * * * 2145 * * 26 0 * * * * * * 2567 0 0 N 27 * 4717 * * 4930 4471 5029 * 3118 * * 1124 * 4308 * 2360 4875 * * * 27 0 * * * * * * 2567 0 0 M 28 4259 * * 4308 * * * 5550 3903 2701 3175 3367 * 3404 3506 2526 * 3448 * * 28 0 * * * * * * 2567 0 0 L 29 * * * * * * * * * 168 * * * * * * * 3185 * * 29 0 * * * * * * 2567 0 0 R 30 * * * * * * * * 2020 3185 * * * * 636 * * * * * 30 0 * * * * * * 2567 0 0 E 31 4290 * 2197 1136 * * * * * * 3903 * * 2659 4308 * * * * * 31 0 * * * * * * 2567 0 0 Q 32 * * 4123 4674 * * 2364 * * 4308 * * * 602 * * * * * * 32 0 * * * * * * 2567 0 0 V 33 * * * * * * * 2757 * 4674 * * * * * * * 299 * * 33 0 * * * * * * 2567 0 0 A 34 1467 1317 * 4123 4717 4836 * 4930 * * * * * * * 5474 4290 * * * 34 0 * * * * * * 2567 0 0 Q 35 * * 4259 2712 * * * * 4875 4674 4836 * * 819 4000 4123 * * * * 35 0 * * * * * * 2567 0 0 L 36 * * * * * * * * * 0 * * * * * * * * * * 36 0 * * * * * * 2567 0 0 K 37 * * * * * * * * 76 * * * * 4290 * * * * * * 37 0 * * * * * * 2567 0 0 Q 38 * * * 3624 * 4290 * * * 4836 * * * 327 * 4824 * * * * 38 0 * * * * * * 2567 0 0 K 39 * * * 3008 * * * * 1507 * * * * 1686 3274 * 3185 * * * 39 0 * * * * * * 2567 0 0 V 40 * * * * * * * 3185 * * * * * * * * * 168 * * 40 0 * * * * * * 2567 0 0 M 41 * * * * * * * 3285 * 4237 676 * * 4123 4290 * * 3185 * * 41 0 * * * * * * 2567 0 0 N 42 * * 3035 1357 * * 3903 * * * 4971 2641 * * 4971 3399 3295 * * * 42 0 * * * * * * 2567 0 0 Y 43 * * * * * * 48 * * * * * * * * * * * * 4926 43 0 * * 0 * * * 2550 0 0 //