HHsearch 1.5 NAME c1g2dC_ FAM FILE c1g2dC_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1g2dC_.a3m DATE Tue Mar 9 14:30:48 2010 LENG 89 match states, 89 columns in multiple alignment FILT 142 out of 16751 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 9.8 EVD 0.4933 0.2607 SEQ >ss_dssp CCSCEECSCTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGSCC >sa_dssp EEDDDDBEDEECDEDCDEDEDBDCBCCEDDEEDECDAEEDDEDBDDEDCCDDBDCEDEEEEDCDBEEDDEDBCCDEDCDDCCEDDEEEE >ss_pred CCCCEECCCCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCHHHHHHHHHHHCCCC >ss_conf 97773737201057455775712001222222112222100000122221100122112333442014735448789987889865899 >Consensus xEkpxxCxxxxCxkxFxxxxxLxxHxxxhxxxxxxxcxxcxxxxxxxxxxxxhxxxhxxxxxxxCxxCxkxFxxxxxLxxHxrxHtgek >c1g2dC_ MERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIHLRQK >UniRef50_D2GZ53(205-289:1177) Putative uncharacterized protein n=1 Tax=Ailuropoda melanoleuca RepID=D2GZ53_AILME E=6e-06 s/c=0.61 id=21% cov=97% -EKPYEYNKN--GNGLHLNEDFVHHQKIQILEQPFEYSECRKAFHENSLFVVHKKAYTGKNTCEYSECGKIFCDMSSLIAHQRTHPRE- >UniRef50_Q179L3(301-365:535) Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q179L3_AEDAE E=0.0006 s/c=0.69 id=20% cov=74% ------------------SNQYRYHMLKQHSEPSYKCAHCKKEFHLLAAYRRHTDTHANKFRYQCKICKHNFKAQVYLERHMR------ >UniRef50_UPI00017B165B(334-416:416) UPI00017B165B related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B165B E=8e-09 s/c=0.74 id=16% cov=93% ----HTCDYVGCGKTYTKSSHLKAHHRtHTGEKPYHCDWEGCGWKFARSDELTRHYRKHTGHRPQCQKCDRAFSRSDHLALHMKRHL--- >UniRef50_UPI000186D8BC(212-301:377) transcriptional repressor protein yy, putative n=2 Tax=Coelomata RepID=UPI000186D8BC E=5e-07 s/c=0.62 id=20% cov=101% MDRTIACPHKDCNKMFRDNSAMRKHLHTHGPRVHVCAECGKAFvESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR >UniRef50_UPI0000E496A6(401-500:1381) PREDICTED: similar to tristanin n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E496A6 E=0.0004 s/c=0.46 id=20% cov=100% -EKENTWPCFECTRKFRTSELLQKHlsshdapvvksrGRGKRGRPRKYPEGYRQRQRKLAQAKLEHMKSETKEEYSCDYCDKKFPRFYSLQRHLVMHSGE K >UniRef50_UPI000198518F(1200-1292:1295) PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198518F E=2e-05 s/c=0.54 id=20% cov=99% --KKNICPVKGCGKKFFSHKYLVQHRRVHIDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYICteagCGQTFRFVSDFSRHKRKtgHSAKK >UniRef50_Q4RVU4(1315-1399:1637) Chromosome 9 SCAF14991, whole genome shotgun sequence. (Fragment) n=5 Tax=Clupeocephala RepID=Q4RVU4_TETNG E=6e-05 s/c=0.57 id=21% cov=97% --KRFSCRI--CMESFHGRSDMENHKRAHLDANTFKCPDCDFTSASWPEVKAHMELHSYLRPHKCPTCSFASKNKKDLRRHMMTHTNEK >UniRef50_A2Q8H5(42-136:512) Contig An01c0150, complete genome n=13 Tax=Trichocomaceae RepID=A2Q8H5_ASPNC E=0.0003 s/c=0.48 id=20% cov=100% -ERLFRCTHDDCDKTFLRASHLSHHIKSAHTGIRDYVCDRPGCGKSFVTGSRLRRHiaahdgRDKYRCTEFPPCDETFRKHSTLQKHiMSVHLKQK >UniRef50_C5FZ01(415-499:838) Zinc finger transcription factor n=1 Tax=Microsporum canis CBS 113480 RepID=C5FZ01_NANOT E=0.0006 s/c=0.53 id=19% cov=88% --------CKHCDKVFRRPCDLTKHEKVHTRPWKCLDTKCKYYQLGWPtekerDRHMNDRHTKSPKKYKCLYPGCTYdtKRQSNCKQHMeKLH---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 1684 1850 * * * * * * 1282 * * 1 0 * * * * * * 3741 0 0 E 2 * * 2382 344 * * * * * * * * * 5631 * * * * * * 2 35 5379 * 0 * * * 7786 1000 0 R 3 * * * * * * * * 711 4974 * * * 5970 1613 * 6100 * * * 3 0 * * * * * * 8754 0 0 P 4 * * * 5332 * 6688 * 6780 3752 5447 * 6300 627 4421 3481 * 4665 5415 * * 4 29 5651 * 2312 324 * * 8827 1758 0 Y 5 * 6296 * * 1306 6028 3081 6714 * 5564 * 5326 6518 * * * * * 6117 1441 5 0 * * * * * * 9440 0 0 A 6 4105 * * 3114 6712 6397 5281 3402 2029 6840 * 5534 4806 3622 4045 4614 3523 3267 * * 6 31 6657 6453 0 * * * 9516 1000 0 C 7 * 119 * * 5058 * 5356 * * * * * * * * * * * 6355 6304 7 207 * 2902 * * 0 * 9555 0 1000 P 8 5312 6514 3825 4949 * 5559 3533 6455 3943 5860 * 3637 2483 5836 4333 3152 2321 * 6671 6524 8 130 5661 3911 4084 88 * 0 9844 1738 5629 V 9 6877 1483 * 5285 4194 6355 3730 3445 6701 4762 * 6789 * 5406 6302 * * 2744 4362 3567 9 249 * 2659 * * 523 1717 9802 0 6588 E 10 4719 6796 2885 2367 5408 5526 5929 6640 3024 6576 * 3255 3057 3955 5118 4141 6623 5386 * 6672 10 27 * 5776 * * 1960 429 9782 0 6891 S 11 5601 * 3370 3095 5866 1753 4034 4088 3670 5833 * 6012 * 3551 * 4922 4881 5232 * 4589 11 27 * 5736 * * 94 3991 9833 0 6447 C 12 * 31 * * 5552 * * * * * * * * * * * * * * * 12 28 5714 * 1604 575 0 * 10001 2188 2325 D 13 7491 6708 3090 3478 6796 1868 4383 7003 4473 6248 6545 3593 4654 5306 5042 2999 4448 * * 5575 13 0 * * * * * * 10030 0 0 R 14 3750 * * 4763 6277 * 5165 5913 1329 5489 5210 5926 * 4017 2565 4309 5921 7084 6188 4354 14 0 * * * * * * 10030 0 0 R 15 3149 5056 7058 4581 6583 4459 7101 4741 4326 7033 5204 * * 5618 2891 2751 2628 2793 6287 * 15 0 * * * * * * 10035 0 0 F 16 5441 6205 * * 591 * 7048 5007 * 4594 * * * * * 4456 4912 7086 * 2907 16 0 * * * * * * 10043 0 0 S 17 4434 6987 4610 4980 7043 4786 3775 5080 2933 5007 6205 4174 4002 * 3379 2829 2861 4457 * 6222 17 0 * * * * * * 10043 0 0 Q 18 6394 5511 3734 5526 6249 4995 4402 5253 4419 4510 7073 3558 * 3722 3376 2489 2652 7188 5374 5160 18 10 7108 * 2000 415 * * 10043 1000 0 K 19 4036 * 7038 4787 7253 6206 4808 6150 2343 4993 7039 4799 2855 3933 2910 2718 5214 4731 * * 19 0 * * * * * * 10039 0 0 T 20 3555 5512 5326 3450 7042 4246 4668 * 4198 5510 * 3528 5310 4254 4402 2044 4595 4419 6112 4508 20 0 * * * * * * 10039 0 0 N 21 3150 6635 3304 3812 * 3575 3131 6214 3669 4483 6023 3003 * 4148 7388 3203 5808 6246 * 5168 21 0 * * * * * * 10039 0 0 L 22 6266 * * * 3897 * * 4574 * 477 4785 * * 6121 5205 * * 6046 5158 4698 22 11 6991 * 2322 322 * * 10039 1000 0 D 23 4342 6007 5352 4305 6984 6152 5527 5352 2266 4131 5190 5198 5788 3257 3315 3928 3948 3390 * 5430 23 0 * * * * * * 10039 0 0 T 24 3320 5455 4819 3912 4771 5599 4529 4089 3340 4842 5823 4008 * 3893 2648 4389 4666 4375 * 4631 24 0 * * * * * * 10039 0 0 H 25 * 5702 * * * * 66 * * * * * 7012 6949 * * * * * 6678 25 99 4072 7230 1744 512 * * 10039 4133 0 I 26 * * * 3752 6091 7052 5520 2461 3710 3370 3016 6088 * 2402 3538 6922 6510 4051 6324 5551 26 97 3940 * 173 3146 * 0 10026 4571 1000 R 27 6244 5267 5525 4577 7536 7036 4251 5522 2108 4161 6100 3830 * 3889 2033 4309 5654 5201 * 5170 27 78 4249 * 0 * * 0 10026 4521 1000 I 28 3423 4964 4991 7071 5532 6002 3847 3105 3871 4148 6080 4419 6896 4772 4159 3778 2603 4162 6105 5815 28 17 6418 * 2277 333 0 * 10026 1652 1000 H 29 4824 6272 5099 5998 7114 4965 771 5366 4916 7058 5974 5093 4627 5485 5473 6991 4851 4514 * * 29 65 4695 7527 3262 159 * * 10039 3369 0 T 30 4267 5528 4858 4087 5136 4474 1987 4470 3899 6279 7102 4140 5076 6198 3646 4334 3072 5709 * 7058 30 60 5154 6297 2087 387 * 0 10044 2715 1000 G 31 3800 6715 3986 3143 4765 3121 5530 5372 4446 4518 5970 3889 3973 4604 3380 3413 4773 4963 * 6878 31 20 6197 * 3380 146 1515 621 10038 1757 2448 Q 32 5011 6689 2951 2350 5090 3709 4756 5071 3406 4630 5974 4970 3947 4894 4055 5255 4590 4604 * 6486 32 36 5351 * 2162 365 1000 1000 10032 2788 1756 K 33 4756 4493 5177 3583 5500 4991 5582 5469 2487 5099 5111 5368 4028 3828 2735 4739 4260 4135 5906 7756 33 49 5597 6307 2134 373 0 * 10025 2294 1000 P 34 4811 4091 4786 4602 5008 5482 6186 6102 3623 4730 5757 5043 2430 4419 3880 3522 3325 4725 6208 4628 34 54 4755 * 1713 525 0 * 10038 3162 1728 F 35 5083 3455 5629 5925 3137 * 3796 4047 3971 4105 * 7064 4294 4249 * 4322 5002 4442 4697 2338 35 30 6069 7380 997 1003 * * 10039 1744 0 Q 36 4204 3280 5400 3560 4334 6252 4594 4733 2571 4709 5941 5436 3614 4480 4088 4551 4431 4622 6694 5498 36 19 6230 * 1699 531 * 0 10038 1640 1000 C 37 5260 1100 4133 5357 5818 5134 4676 * 4515 4996 6930 5041 5491 7502 5502 4780 5021 6125 5147 3888 37 49 5257 7141 3057 185 * 0 10038 2349 1000 R 38 4809 3336 3855 3215 5287 4140 4002 5802 3346 4270 6453 5741 3016 5419 4432 4168 4337 5259 7307 6085 38 0 * * * * 924 1080 10037 0 1626 I 39 5412 3664 4138 3512 4034 4797 4171 3903 4357 3922 5056 4596 6178 4213 4470 4014 4394 4493 5590 4057 39 40 5195 * 1000 1000 * 0 10038 2984 1000 C 40 5283 1095 4996 5147 4676 3937 7094 7035 4002 4702 * 6052 6076 5958 4440 4791 4505 6184 * 4633 40 5 8119 * 3170 170 0 * 10038 1000 1000 M 41 5160 3857 3536 3999 4610 2264 4130 7134 3579 4883 5479 4640 3933 7562 4661 3217 6271 5456 * 7115 41 14 6725 * 3170 170 * * 10039 1000 0 R 42 3879 4000 5216 4397 3681 4038 5124 4999 2543 3822 * 5003 6944 3230 4427 4538 4572 5487 6092 4656 42 43 5518 7115 3516 132 * * 10039 2302 0 N 43 4685 4218 5463 4369 4525 3800 5577 4379 3587 4890 6201 4567 4296 5208 3285 2924 3694 4556 5362 5441 43 41 5489 7436 689 1397 * 0 10034 2784 1000 F 44 4183 4264 7188 4682 1691 4471 5315 6086 4215 5720 5483 5423 5814 4431 4778 3946 3965 4995 * 3775 44 11 * 7057 * * 0 * 10033 0 1693 S 45 3721 5561 5973 4734 4537 4767 4289 4215 3246 3860 * 4690 4850 4326 3299 2863 3724 4457 * 7196 45 0 * * * * 0 * 10031 0 1000 Q 46 4540 5305 5858 4210 4474 5047 4415 7134 3179 5288 * 3888 5690 3844 3001 3013 3489 4816 6697 4170 46 0 * * * * * * 10039 0 0 H 47 3841 6096 4022 4404 4438 6021 4783 6111 3055 3993 6350 4805 5389 3891 2902 3487 4357 5397 4929 4516 47 30 5606 * 1000 1000 * * 10039 2307 0 T 48 3793 6184 3421 5510 5922 3979 4624 5196 3648 3612 6251 5060 4156 4575 3760 2689 4616 4520 7045 5189 48 29 5644 * 2725 237 * * 10039 1840 0 G 49 3308 7060 2875 3732 6593 4676 3657 5133 4358 3648 7039 3617 5983 5299 3976 3426 4047 4988 6991 7067 49 40 5606 7132 1652 552 * * 10039 2461 0 L 50 4188 7078 6640 4971 3259 5079 4369 5425 4743 1881 4855 5078 4958 5593 3432 5146 5589 4028 6176 4398 50 11 * 7087 * * 0 * 10027 0 1000 N 51 5213 6018 4032 4790 6247 6918 3481 4936 2816 3401 7215 4723 4677 3710 3517 3581 3842 5480 5968 4614 51 11 6998 * 1585 585 0 * 10038 1000 1000 Q 52 4944 6239 4597 3719 6639 4760 4295 4671 2972 4330 5657 5221 6056 3585 2660 3689 3884 4133 7455 6439 52 11 7097 * 3459 138 * * 10039 1000 0 H 53 * 5898 6106 5587 7060 6744 863 * 4611 4057 5996 5395 5411 5764 4012 4599 5283 4567 * 5158 53 28 5713 * 2058 396 * * 10039 2342 0 I 54 5904 7086 5012 3614 5861 * 3301 3909 3669 3083 3862 6042 5915 3467 3308 4459 4127 3655 7085 * 54 20 6156 * 0 * * * 10039 1679 0 R 55 4330 6991 5722 4148 5222 4794 3463 6984 2973 4246 4233 3858 5903 4088 2633 4162 4152 5144 7276 5650 55 102 3876 * 1875 459 * * 10039 4681 0 T 56 6961 6944 7042 4755 7086 4698 3191 4384 4108 3774 4339 4303 4547 5614 3663 3483 2919 3107 * 5331 56 53 5060 7375 1144 869 * * 10039 2803 0 H 57 7105 5908 4690 4694 5781 4670 1128 5080 4155 5592 5783 6074 3823 6246 4290 5001 5079 5192 * 5577 57 29 7222 6251 5000 46 0 * 10036 1000 1000 T 58 3164 7347 4135 4001 5979 5472 3076 7020 4691 5739 5364 4825 4198 4552 4371 3502 2486 4506 * 5326 58 42 5125 * 2812 222 945 1057 10026 3008 1655 G 59 4006 7060 3916 3939 7020 2561 4701 5107 3317 6095 5585 3766 4101 6350 4241 3923 3574 4232 * 5768 59 51 4836 * 1874 459 0 * 10029 3245 1000 E 60 5612 * 3931 2403 * 4007 4685 5245 3242 4410 * 5011 3180 4931 3829 4590 3547 4232 * 5643 60 33 5461 * 2312 324 * * 10046 2383 0 K 61 4374 4905 5598 4763 4999 4290 4671 6471 2241 5492 4740 4037 4703 4394 2570 4869 4987 5178 * 4375 61 99 3920 * 2288 331 * * 10046 4745 0 P 62 4993 5077 5176 4727 6724 5898 5983 6030 2655 4349 5857 4543 1922 4578 3676 4766 3796 4851 7279 6121 62 53 4798 * 2768 229 * * 10046 3141 0 F 63 * 3190 6723 * 2294 * 3072 6032 5735 4881 7310 5593 5544 6155 4896 5746 5006 4432 6905 1788 63 18 6305 * 2421 298 * * 10046 1685 0 A 64 6502 5410 4062 3930 7081 6276 3976 4671 2768 5148 5851 6634 3157 2874 3403 4812 4066 3906 * 6723 64 32 5513 * 3135 174 * * 10046 2257 0 C 65 7026 362 * 7091 4597 5607 6636 6989 * 6591 * * 6002 * * 4884 5710 * 5734 5092 65 23 6951 7026 1000 1000 * * 10051 1000 0 D 66 4342 5262 2781 3041 * 5673 5088 5470 3927 5377 * 3683 3024 3596 4779 3670 3821 6433 * 6016 66 24 6612 7332 4644 59 * 0 10036 1000 1000 I 67 5475 5518 4900 2471 3950 3790 4784 3622 4176 3590 6119 4705 7075 3968 6064 5799 5680 3311 7157 3950 67 34 5405 * 1489 636 964 1037 10033 2107 1707 C 68 * 112 * * * 5916 6473 * * * * 6986 6761 * * 6576 * * * 5682 68 0 * * * * * 0 10036 0 1000 G 69 4736 * 3086 4360 7248 1485 5946 * 5186 5109 5852 4005 3614 4437 * 3223 5122 * 6994 6897 69 0 * * * * 0 * 10036 0 1000 R 70 6269 5915 7163 6200 4849 7183 5169 7375 882 7005 4945 5874 * 4488 3170 6285 6840 6130 6014 3886 70 0 * * * * * * 10051 0 0 K 71 2764 6134 6591 5458 6876 4198 7149 5384 3770 6988 7152 6270 6190 5021 3202 2768 2636 2806 7308 * 71 0 * * * * * * 10051 0 0 F 72 5076 4325 * * 433 * * 7028 * 5638 * * * * * 4338 5222 * * 3725 72 26 5818 * 571 1612 * * 10047 1778 0 A 73 4068 6947 5514 5587 5295 5477 5070 4344 2659 5850 5173 4081 4651 5160 3718 2442 3179 5106 5913 5928 73 0 * * * * * * 10047 0 0 T 74 5325 6880 4313 7064 5173 5209 5056 * 4318 5194 6060 3537 * 3647 2481 2992 2748 5485 4734 4266 74 11 7028 * 2000 415 * * 10047 1000 0 L 75 4175 * 6458 5582 5041 7030 5110 5921 2430 3534 4047 3689 4152 3462 3340 3070 6080 5233 7204 7402 75 0 * * * * * * 10047 0 0 H 76 4491 6093 3502 4199 4914 4463 4632 7145 4198 7086 5770 3836 4884 4195 4650 1847 4700 6302 4777 5149 76 0 * * * * * * 10047 0 0 T 77 3788 6895 2640 5726 6088 4387 3549 * 4749 4453 6989 2663 * 3458 5355 2952 4253 6163 * 4957 77 10 7172 * 2000 415 * * 10047 1000 0 R 78 * 6761 * * 3401 * 6232 5808 6173 598 3990 * * * 4961 * * 4811 6718 4310 78 11 * 6989 * * * * 10047 0 0 D 79 4263 7053 5222 3683 6934 6196 6153 4053 2345 3617 5536 4313 6881 3412 2961 4401 4165 5148 7051 5662 79 0 * * * * * 0 10037 0 1000 R 80 4160 * 5006 4066 * 5511 * 4658 2704 5192 * 4627 * 3533 1930 3946 3917 4033 * 5092 80 12 * 6859 * * * 0 10037 0 1000 H 81 * * * * * * 63 * * 6592 * * * * 5555 * * * * 6482 81 109 3945 6943 0 * 924 1080 10041 4848 1657 T 82 * 7038 * 3904 5066 * * 4083 3070 2719 2442 6926 * 2561 3450 5031 5906 4105 * 7110 82 52 4812 * 0 * 0 * 10027 2739 1703 K 83 4200 6929 * 4712 * 7156 * 3831 2053 4238 5676 4851 6923 4875 1469 5388 6127 6023 * 5911 83 0 * * * * * * 9741 0 0 I 84 7038 6074 * 5948 7060 6891 * 2669 3570 3573 4792 6956 * 6724 5438 3589 1690 2735 * * 84 81 4201 * 218 2832 * * 9746 3657 0 H 85 * * * * * * 0 * * * * * * * * * * * * * 85 0 * * * * * * 9728 0 0 L 86 3683 * 6645 4732 6484 6510 * 5098 4540 4001 4256 4462 5509 4625 6617 2815 1406 5165 * * 86 0 * * * * * * 9405 0 0 R 87 4822 * 4776 2977 * 1051 * * 2806 * * 4446 * 4919 3886 5104 * * * * 87 0 * * * * * * 9335 0 0 Q 88 5401 * 3344 700 * 6324 * * 3372 * 6123 6470 * 3442 6659 6391 * 6191 * * 88 0 * * * * * * 9061 0 0 K 89 * * * * * * * * 623 * * * * * 1511 * * * * * 89 0 * * 0 * * * 8264 0 0 //