HHsearch 1.5
NAME  c1acwA_
FAM   
FILE  c1acwA_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c1acwA_.a3m 
DATE  Wed Jan  9 15:29:21 2013
LENG  29 match states, 29 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5110  3.0379 
SEQ
>ss_dssp
CCSSHHHHHHHTTTCEEEEETTEEEEECC
>sa_dssp
EDDEDCBDEBEEEEBEAECDEEECEDEDE
>ss_pred
CCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>ss_conf
98444345542002232103763001559
>Consensus
vxcedcpehcxtqxaxakcdndkcvcepi
>c1acwA_
VSCEDCPEHCSTQKAQAKCDNDKCVCEPI
>UniRef50_Q9U8D2(30-56:57) Potassium channel toxin alpha-KTx 8.2 n=7 Tax=Buthidae RepID=KAX82_MESMA  E=1e-06 s/c=2.00 id=82% cov=97%
-TCEDCPEHCATQNARAKCDNDKCVCEP-
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
V 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	1
       0	*	*	*	*	*	*	1000	0	0	

S 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	2
       0	*	*	*	*	*	*	1108	0	0	

C 3    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1108	0	0	

E 4    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1108	0	0	

D 5    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1108	0	0	

C 6    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1108	0	0	

P 7    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1108	0	0	

E 8    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1108	0	0	

H 9    *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1108	0	0	

C 10   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1108	0	0	

S 11   1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	*	11
       0	*	*	*	*	*	*	1108	0	0	

T 12   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	12
       0	*	*	*	*	*	*	1108	0	0	

Q 13   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1108	0	0	

K 14   *	*	*	*	*	*	*	*	1000	*	*	1000	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1108	0	0	

A 15   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1108	0	0	

Q 16   *	*	*	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	*	*	16
       0	*	*	*	*	*	*	1108	0	0	

A 17   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1108	0	0	

K 18   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1108	0	0	

C 19   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1108	0	0	

D 20   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1108	0	0	

N 21   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1108	0	0	

D 22   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1108	0	0	

K 23   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1108	0	0	

C 24   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1108	0	0	

V 25   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	25
       0	*	*	*	*	*	*	1108	0	0	

C 26   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1108	0	0	

E 27   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1108	0	0	

P 28   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1108	0	0	

I 29   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	29
       0	*	*	0	*	*	*	1000	0	0	

//