Return to main results Retrieve Phyre Job Id

Job Descriptionbad_result
Confidence6.45%DateSun Sep 7 16:40:49 BST 2014
Rank90Aligned Residues40
% Identity10%Templatec4afiB_
PDB info PDB header:endocytosisChain: B: PDB Molecule:ap-3 complex subunit delta-1, vesicle-associated membrane PDBTitle: complex between vamp7 longin domain and fragment of delta-2 adaptin from ap3
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .........60.....
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Query Sequence  NYERMQNLGYCYSMLPAIKKLYNKK. . . . . . . . . . ENQAKAIERHLEIFN
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Template Sequence  DFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHS
Template Known Secondary structure  TS
GGGGGT

TTTT
Template Predicted Secondary structure 






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   122.......130.........140.........150.........160.........170.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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