Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence99.96%DateSat Sep 6 16:42:08 BST 2014
Rank30Aligned Residues137
% Identity18%Templatec1yhuX_
PDB info PDB header:oxygen storage/transportChain: X: PDB Molecule:hemoglobin b2 chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits.
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.... .....30.........40.........50.........60
Predicted Secondary structure 


.....






Query SS confidence 


















. . . . .



































Query Sequence  AAQLTADVKKDLRDSWKVI. . . . . GSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGM
Query Conservation     

  
  

  

  
.....       
   
  

   
     
          
Alig confidence 


















.....





























..



Template Conservation      
  
   
  

  
            
   
  

   
  
  
    ..    
Template Sequence  AASCTTEDRREMQLMWGNVWSAQFTGRRIAIAQAVFKDLFANVPDAVGLFGAVK. . GDEV
Template Known Secondary structure 






SS
S
GGGGGGGGGGT..SSST
Template Predicted Secondary structure 













..



Template SS confidence 



























































   1........10.........20.........30.........40.........50.... ....
 
   61........70.........80.........90.........100... ......110.........
Predicted Secondary structure 






.


Query SS confidence 










































.















Query Sequence  ANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITR. KISAAEFGKINGPIKK
Query Conservation         
       
   
  
 
   
   
  

  
   . 
    
      
  
Alig confidence 










































.















Template Conservation   
     
   
   
   
  


   
   
  

  
     
    
      
  
Template Sequence  NSNEFKAHCIRVVNGLDSSIGLLSDPATLNEQLSHLATQHKARSGVTKGGFSAIAQSFLR
Template Known Secondary structure  TSTT
TSTT

Template Predicted Secondary structure 









Template SS confidence 



























































   5960.........70.........80.........90.........100.........110........
 
   120.........130.........140.....
Predicted Secondary structure 




Query SS confidence 

























Query Sequence  VLASKNFGDKYANAWAKLVAVVQAAL
Query Conservation   
       
   

      
   
Alig confidence 



.




















Template Conservation   
  . 
      

      
   
Template Sequence  VMPQ. VASCFNPDAWSRCFNRITTGM
Template Known Secondary structure  .SSS

Template Predicted Secondary structure  .




Template SS confidence 

























   119120.. .......130.........140...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D