Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence99.96%DateSat Sep 6 16:42:08 BST 2014
Rank24Aligned Residues136
% Identity18%Templatec3wctA_
PDB info PDB header:oxygen transportChain: A: PDB Molecule:a1 globin chain of giant v2 hemoglobin; PDBTitle: the structure of a deoxygenated 400 kda hemoglobin provides a more2 accurate description of the cooperative mechanism of giant3 hemoglobins: oxygenated form
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.... .....30.........40.........50.........60....
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Query Sequence  QLTADVKKDLRDSWKVI. . . GSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDK
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Template Sequence  DCNILQRLKVKMQWAKAYGFGTERAKFGNSLWTSIFNYAPDARDLFKSVKS. . EDMRSPQ
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STT
GGGGGGGGGGTT..T
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   1........10.........20.........30.........40.........50. .......
 
   65....70.........80.........90.........100.........110.........120....
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Query Sequence  LRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASK
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Template Sequence  FKAHIARVIGGLDRVISMFDNEDALNADLEHLKSQHDPRGLDALNFVVFGKALFATVGGQ
Template Known Secondary structure  TTT
GGG


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   5960.........70.........80.........90.........100.........110........
 
   125....130.........140.....
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Query Sequence  NFGDKYANAWAKLVAVVQAAL
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Template Sequence  FGVCFDLPAWESCYKVIAMGI
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TT

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   119120.........130.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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