Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence98.13%DateSat Sep 6 16:42:08 BST 2014
Rank116Aligned Residues132
% Identity14%Templatec2veeC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:protoglobin; PDBTitle: structure of protoglobin from methanosarcina acetivorans2 c2a
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.......
Predicted Secondary structure 











Query SS confidence 



























































Query Sequence  QLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRG
Query Conservation   

  
  

  

  
       
   
  

   
     
                 
Alig confidence 

































.







...













Template Conservation    



   
  
 
 
      


 

  
  . 
 
   
...           


Template Sequence  MFTAEDEEYIQKAGEVLEDQVEEILDTWYGFVGS. HPHLLYYF. . . TSPDGTPNEKYLAA
Template Known Secondary structure  T

T.
GGG...B
TTSSB
Template Predicted Secondary structure 



.
...







Template SS confidence 



























































   33......40.........50.........60...... ...70.... .....80........
 
   68.70.........80.........90.........100........ .110.....
Predicted Secondary structure 







............
Query SS confidence 








































. . . . . . . . . . . .






Query Sequence  HSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAA. . . . . . . . . . . . EFGKING
Query Conservation 
       
   
  
 
   
   
  

  
    
   ............ 
     
Alig confidence 





















.

















............






Template Conservation 

     
   



  
  
 .    


  
 



           

  
  
   
Template Sequence  VRKRFSRWILDTSNRSYDQAWL. DYQYEIGLRHHRTKKNQTDNVESVPNIGYRYLVAFIY
Template Known Secondary structure  S

S.STTTTTTTTT



S


T
Template Predicted Secondary structure 




.












Template SS confidence 



























































   8990.........100.........110 .........120.........130.........140.......
 
   116...120 ......... 130.........140....
Predicted Secondary structure  ....


....
Query SS confidence 




. . . .








. . . .














Query Sequence  PIKKV. . . . LASKNFGDK. . . . YANAWAKLVAVVQAA
Query Conservation   
   ....
       
....   

      
   
Alig confidence 




....








....














Template Conservation   
              
        
  
 
 

  
Template Sequence  PITATMKPFLARKGHTPEEVEKMYQAWFKATTLQVAL
Template Known Secondary structure  TTT


Template Predicted Secondary structure 



Template SS confidence 




































   148.150.........160.........170.........180....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D