Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence99.96%DateSat Sep 6 16:42:08 BST 2014
Rank28Aligned Residues137
% Identity22%Templatec2vywA_
PDB info PDB header:oxygen bindingChain: A: PDB Molecule:hemoglobin; PDBTitle: hemoglobin (hb2) from trematode fasciola hepatica
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.... .....30.........40.........50.... .....60...
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Query Sequence  LTADVKKDLRDSWKVI. . . GSDKKGNGVALMTTLFADNQETIGYFKRLG. . NVSQGMAND
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Template Sequence  LTQTQIDSILADLAHHTDTTEHITEMGVSIYKTLFAAHPEYISYFSKLQGLTKDNVGQSE
Template Known Secondary structure 

GGGSSS
GGGGGGSGGGTT

TTTGGG
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   3......10.........20.........30.........40.........50.........60..
 
   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  KLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLAS
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Template Sequence  GIRYYGRTLGEELIRLLKAASNPSVLEERIVQGAKDHKARPVTKDQFTGAAPIFIKFFQG
Template Known Secondary structure  TTT
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   63......70.........80.........90.........100.........110.........120..
 
   124.....130.........140.....
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Query Sequence  KNFGDKYANAWAKLVAVVQAAL
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Template Sequence  LLKKQEDKDAIEKFLLHVMQAI
Template Known Secondary structure 

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   123......130.........140....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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