Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence99.96%DateSat Sep 6 16:42:08 BST 2014
Rank47Aligned Residues134
% Identity19%Templatec3wctD_
PDB info PDB header:oxygen transportChain: D: PDB Molecule:b1 globin chain of giant v2 hemoglobin; PDBTitle: the structure of a deoxygenated 400 kda hemoglobin provides a more2 accurate description of the cooperative mechanism of giant3 hemoglobins: oxygenated form
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.... .....30.........40.........50.........60..
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Query Sequence  LTADVKKDLRDSWKVI. . . . . . GSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMAN
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Template Sequence  CSEADATIVIKQWNQIYNAGIGAKSRWTMGNEIFSSLFKLKPESEVLFNNVN. . VANMSS
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STTS

GGGGGGGGGGT..TT
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   4.....10.........20.........30.........40.........50..... ....60.
 
   63......70.........80.........90.........100... ......110.........120.
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Query Sequence  DKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITR. KISAAEFGKINGPIKKVL
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Template Sequence  GAFHAHTVRVLSGLDMGINYLNDAGTLTSLTAHLAAQHVARTGLKAVYFDAMGKVLMTVL
Template Known Secondary structure  TTTT
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   62.......70.........80.........90.........100.........110.........120.
 
   122.......130.........140.....
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Query Sequence  ASKNFGDKYANAWAKLVAVVQAAL
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Template Sequence  PSL. IDNFNPDAWRNCLLPLKNAI
Template Known Secondary structure  .STT

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   122.. .....130.........140....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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