Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence26.73%DateSat Sep 6 16:42:08 BST 2014
Rank153Aligned Residues133
% Identity11%Templatec2vmlD_
PDB info PDB header:photosynthesisChain: D: PDB Molecule:phycocyanin beta chain; PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910......... 20.........30.........40.........50........
Predicted Secondary structure 

..........




Query SS confidence 










. . . . . . . . . .






































Query Sequence  LTADVKKDLRD. . . . . . . . . . SWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQ
Query Conservation 

  
  

  ..........

  
       
   
  

   
     
        
Alig confidence 










..........

























...









Template Conservation 

  

  
  
  
   

 

  
      

  
   
    
 ...
   

  
 
Template Sequence  LSEQELNQLTNLVKESNKRLDAVNAITGNAAEIISDAAHKLFAEQTD. . . LIRPGGNAYP
Template Known Secondary structure 

TTT
GG...GGSTTSTT
S
Template Predicted Secondary structure 




...









Template SS confidence 



























































   1920.........30.........40.........50.........60..... ....70.....
 
   5960.........70.........80......... 90.........100.........110 ...
Predicted Secondary structure 







.



....
Query SS confidence 






























.




















. . . .


Query Sequence  GMANDKLRGHSITLMYALQNFIDQLDNPDDL. VCVVEKFAVNHITRKISAAEF. . . . GKI
Query Conservation           
       
   
  
 
   
.   
  

  
    
    
....   
Alig confidence 























.





.




















....


Template Conservation    
   
 

    

   



 .

   
    
 



 
  
 

      

  
Template Sequence  NRRMAACLRDMEIILRYVSYALLA. GDASVLEDRCLNGLKETYVALGTPTRSVARAVQLM
Template Known Secondary structure  .TSSTTTTT

Template Predicted Secondary structure  .









Template SS confidence 



























































   76...80.........90......... 100.........110.........120.........130....
 
   114.....120..... ....130.........140.....
Predicted Secondary structure 
.....



Query SS confidence 











. . . . .



















Query Sequence  NGPIKKVLASKN. . . . . FGDKYANAWAKLVAVVQAAL
Query Conservation     
   
    .....   
   

      
   
Alig confidence 











.....



















Template Conservation 
         
                 


 

  
Template Sequence  KETAIGYVNSPSGVTRGDCSALVNEAATYFDKAAASI
Template Known Secondary structure  S
SS





Template Predicted Secondary structure 










Template SS confidence 




































   135....140.........150.........160.........170.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D