Return to main results Retrieve Phyre Job Id

Job Descriptionglobin_example
Confidence99.96%DateSat Sep 6 16:42:08 BST 2014
Rank31Aligned Residues137
% Identity16%Templatec2c0kB_
PDB info PDB header:oxygen transportChain: B: PDB Molecule:hemoglobin; PDBTitle: the structure of hemoglobin from the botfly gasterophilus2 intestinalis
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.... .....60......
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Query Sequence  LTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLG. . NVSQGMANDKLR
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Template Sequence  MNSEEVNDIKRTWEVVAAKMTEAGVEMLKRYFKKYPHNLNHFPWFKEIPFDDLPENARFK
Template Known Secondary structure 

TT
GGGGGG
S
GGGSTT
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   1........10.........20.........30.........40.........50.........60
 
   67..70.........80.... .....90.........100.........110.........120...
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Query Sequence  GHSITLMYALQNFIDQLD. . . NPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLAS
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Template Sequence  THGTRILRQVDEGVKALSVDFGDKKFDDVWKKLAQTHHEKKVERRSYNELKDIIIEVVCS
Template Known Secondary structure 

GGG
STTTS


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   61........70.........80.........90.........100.........110.........120
 
   124.. ...130.........140.....
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Query Sequence  KNF. GDKYANAWAKLVAVVQAAL
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Template Sequence  CVKLNEKQVHAYHKFFDRAYDIA
Template Known Secondary structure  S


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   121........130.........140...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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