|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
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|
|
| . |
. |
|
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|
|
Query Sequence |   |
A | A | A | Q | L | T | A | D | V | K | K | D | L | R | D | S | . |
. |
W | K | V | I | G | S | D | K | K | G | N | G | V | A | L | M | T | T | L | F | A | D | N | Q | E | . |
. |
T | I | G | Y | F | K | R | L | G | N | V | S | Q | G | M |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
| . | . |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
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|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
V | L | S | G | V | D | Q | A | E | A | F | A | I | D | E | S | N | L | F | D | K | L | G | L | Q | T | F | I | N | L | S | T | N | F | Y | T | R | V | Y | D | D | E | E | E | W | F | Q | S | I | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  | S |
|
|  |  |  |  | G | G | G | G | G | S |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  | G | G | G | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
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|
|
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|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
  |
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
| . |
. |
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | D | K | L | R | G | H | S | I | T | L | M | Y | A | L | Q | N | F | I | D | Q | L | D | N | P | D | D | L | V | C | V | V | E | . |
. |
K | F | A | V | N | H | I | T | R | K | I | S | A | A | E | F | G | K | I | N | G | P | I | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   | . | . |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   | . | . | . |
|
|
|   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |
|
|   |
|
|   |   |
|   |
Template Sequence |   |
S | N | S | N | K | E | D | A | I | Q | N | Q | Y | E | F | F | V | Q | R | M | . |
. |
. |
G | G | P | P | L | Y | S | Q | R | K | G | H | P | A | L | I | G | R | H | R | P | F | P | V | T | H | Q | A | A | E | R | W | L | E | H | M | Q |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T | S |
|
|  |  |  |  |  |  | S |
|
|
|  |  |  |  |  | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
  |   |
119 | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | A | S | . |
K | N | F | G | D | K | Y | A | N | A | W | A | K | L | V | A | V | V | Q | A | A | L |
Query Conservation |   |
  |   |
|   |   | . |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
N | A | L | D | D | S | V | D | I | D | Q | D | S | K | I | K | M | M | K | F | F | R | H | T | A | F | F | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |