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Job Descriptionmulti-dom
Confidence36.91%DateSun Sep 7 16:46:09 BST 2014
Rank290Aligned Residues163
% Identity19%Templatec3aerB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400.........410.......
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Query Sequence  VDAALAAAQTNAAAKVDILGVDFDNTTMLQMVENIKTFFANQSTNNLFIVTANPEIVNYA
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Template Sequence  VRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASP. . . .
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   141........150.........160.........170.........180.........190......
 
   418.420.........430........ .440... ...
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Query Sequence  TTHQAYLELINQASYIVADGT. . GVVKA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SHR
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Template Sequence  . . . DDLRK. LGQAHFNVLMYPETGESAARHLERACKQPFTKIVPIGVGATRDFLAEVSKI
Template Known Secondary structure  ...TT.GGGSS




B





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   197..200. ........210.........220.........230.........240.........250..
 
   447..450.... .....460.........470.........480.........490.........500...
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Query Sequence  LKQPLAHR. . IPGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFAH.
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Template Sequence  TGLPVVTDESTLRQPWWSASVDSTYLTGKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGC
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SGGGGGGTT

SSTT

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   253......260.........270.........280.........290.........300.........310..
 
   504... ..510.........520........
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Query Sequence  HHGY. . . . . . . . . . . . . . . . . IDLEDETVVKRIKLFKPDYIF
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Template Sequence  YNREMARPLRTAAAEYGLEALITDDYLEVEKAIEAAAPELIL
Template Known Secondary structure  S
GGGTTT



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   313......320.........330.........340.........350....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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