Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence64.98%DateSun Sep 7 16:46:09 BST 2014
Rank186Aligned Residues142
% Identity10%Templatec2pfyA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30... ......40..... ....50.........60....
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Query Sequence  VIWINGDKGYNGLAEVGKKFEKDTG. . IKVTVEHPDKLE. . EKFPQVAATGDGPDIIFWA
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Template Sequence  AEQPDANYLTQNARQFADEVKAATAGALEIKVQSNSTLLKRPEVKRGVQQGVV. QIGEVL
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   8.10.........20.........30.........40.........50.........60 ......
 
   65....70.........80. ........90.........100.........110.......
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Query Sequence  HDRFGGYAQSGLLAEIT. . . . . . . PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLI
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Template Sequence  VSALGNEDPLFEIDSVPFLASSFNESEKLWKATRPLLAQRLDKQGIVLVYGSPWPPQGIY
Template Known Secondary structure  GGGGTTT
GGGGGGGSTTTS
STTT



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   67..70.........80.........90.........100.........110.........120......
 
   118.120.........130... ......140.........150......
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Query Sequence  YNKDLLPNPPKTWEEI. . . . . . . . . PALDKELKAKGKSALMFNLQEPY
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Template Sequence  TK. . . . . KPVAALADLKGTRFRAYSASTSHXAALXGAVPTTVQTPEVP
Template Known Secondary structure  S.....S

SSGGGGTT

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   127. .130.........140.........150.........160.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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