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Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank20Aligned Residues370
% Identity99%Templatec4logA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:maltose abc transporter periplasmic protein and nr2e3 PDBTitle: the crystal structure of the orphan nuclear receptor pnr ligand2 binding domain fused with mbp
Resolution2.70 Å
Model Dimensions (Å)X:68.487 Y:58.492 Z:48.457

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10.........20.........30.........40.........50.........60...
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Query Sequence  EEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFW
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Template Sequence  EEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFW
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SS

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TTT
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   5....10.........20.........30.........40.........50.........60....
 
   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  AHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLL
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Template Sequence  AHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLL
Template Known Secondary structure  TTTTT
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TTB
TTSTT
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   65....70.........80.........90.........100.........110.........120....
 
   124.....130.........140.........150.........160.........170.........180...
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Query Sequence  PNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVG
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Template Sequence  PNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVG
Template Known Secondary structure  SS

SBSTTSTT

S


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   125....130.........140.........150.........160.........170.........180....
 
   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  VDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNY
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Template Sequence  VDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNY
Template Known Secondary structure  SSSTTSS
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   185....190.........200.........210.........220.........230.........240....
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  GVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAV
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Template Sequence  GVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAV
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   245....250.........260.........270.........280.........290.........300....
 
   304.....310.........320.........330.........340.........350.........360...
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Query Sequence  ALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALA
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Template Sequence  ALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALK
Template Known Secondary structure  SBTTSS


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   305....310.........320.........330.........340.........350.........360....
 
   364.....370...
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Query Sequence  AAQTNAAAKV
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Template Sequence  DAQTNAAAEF
Template Known Secondary structure  S
TT
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   365....370....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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