Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank12Aligned Residues373
% Identity99%Templatec3mp6A_
PDB info PDB header:histone binding proteinChain: A: PDB Molecule:maltose-binding periplasmic protein, linker, saga- PDBTitle: complex structure of sgf29 and dimethylated h3k4
Resolution1.48 Å
Model Dimensions (Å)X:67.922 Y:51.684 Z:42.770

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDI
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Template Sequence  MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDI
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TTTTS

TTS





TTTT
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   738.740.........750.........760.........770.........780.........790.......
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  IFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNK
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Template Sequence  IFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNK
Template Known Secondary structure  GGGTT
B





TB
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T
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   798.800.........810.........820.........830.........840.........850.......
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  DLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIK
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Template Sequence  DLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIK
Template Known Secondary structure  TT
SS

SBGGGTTT



SSSGGGTTT
TT
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   858.860.........870.........880.........890.........900.........910.......
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  DVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK
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Template Sequence  DVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK
Template Known Secondary structure  TTSTTSS
TT

TTS
GGGSS
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   918.920.........930.........940.........950.........960.........970.......
 
   241........250.........260.........270.........280.........290.........300
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Query Sequence  VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPL
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Template Sequence  VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPL
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BBTTB



BTT
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   978.980.........990.........1000.........1010.........1020.........1030.......
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  GAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDA
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Template Sequence  GAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDE
Template Known Secondary structure  SSBTT
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   1038.1040.........1050.........1060.........1070.........1080.........1090.......
 
   361........370...
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Query Sequence  ALAAAQTNAAAKV
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Template Sequence  ALAAAQTNAAAEF
Template Known Secondary structure  TTS

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   1098.1100.........1110
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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