Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence54.96%DateSun Sep 7 16:46:09 BST 2014
Rank217Aligned Residues181
% Identity15%Templated1qopa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370..... ....380 .........390.
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Query Sequence  SGRQTVDAALAAAQTNAAAKVDI. . LGVDF. . . . . . . . . . . . . . . . . . . DNTTMLQMVEN
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Template Sequence  LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEM
Template Known Secondary structure  TTSS
TT
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S

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TT

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   25....30.........40.........50.........60.........70.........80....
 
   392.......400.........410.........420.........430.........440.........450.
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Query Sequence  IKTFFANQSTNNLFIVTANPEIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPL
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Template Sequence  LAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEES. . . . . . . .
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SSS

TT
T

TT

GGG
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   85....90.........100.........110.........120.........130......
 
   452.......460.........470.........480.........490.........500.........510.
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Query Sequence  AHRIPGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFAHHHGYIDLE
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Template Sequence  . . . . . . . . . . APFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAE
Template Known Secondary structure  ..........TT


TT



S
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   137..140.........150.........160.........170.........180......
 
   512 .......520.........530... ......540.........550....
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Query Sequence  D. . . . ETVVKRIKLFKPDYIFVGMGF. . PKQEEWIMTHENQFESTVMMG
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Template Sequence  NRGPLHHLIEKLKEYHAAPALQGFGISSPEQ. . . VSAAVRAGAAGAISG
Template Known Secondary structure  S



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S...TT
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   187..190.........200.........210....... ..220.........230..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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