Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank4Aligned Residues386
% Identity95%Templatec3h4zC_
PDB info PDB header:allergenChain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein
Resolution2.35 Å
Model Dimensions (Å)X:58.211 Y:63.288 Z:48.175

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
Template Known Secondary structure 

TT

TTS
TTT



SSTTTT
S
S
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   2.......10.........20.........30.........40.........50.........60.
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
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Template Sequence  WAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
Template Known Secondary structure  GGGTT
B





B
TBSSSSB
S


TTT
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   62.......70.........80.........90.........100.........110.........120.
 
   123......130.........140.........150.........160.........170.........180..
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Query Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
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Template Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDV
Template Known Secondary structure  SSS

SBSTTTTT




SSGGGT

SSS
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   122.......130.........140.........150.........160.........170.........180.
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
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Template Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVN
Template Known Secondary structure  SSSTTSS
TT

TT

GGGTTT

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   182.......190.........200.........210.........220.........230.........240.
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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Template Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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TT


BTT
TTTTSSTTS

S
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   242.......250.........260.........270.........280.........290.........300.
 
   303......310.........320.........330.........340.........350.........360..
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Query Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
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Template Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
Template Known Secondary structure  SBTTSS


STTSSS
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   302.......310.........320.........330.........340.........350.........360.
 
   363......370.........380.........390.......
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Query Sequence  AAAQTNAAAKVDILGVDFDNTTMLQMVENIKTFFA
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Template Sequence  AAAQTNAAA. . . . . . . . . DPIHYDKITEEINKAVD
Template Known Secondary structure  TTS.........



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   362.......370 .........380.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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