Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank46Aligned Residues365
% Identity29%Templatec2gh9A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: thermus thermophilus maltotriose binding protein bound with2 maltotriose
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10........ .20.........30......... 40.........50.........60..
Predicted Secondary structure 



.




..







.
Query SS confidence 











.




















. .






















.
Query Sequence  KLVIWINGDKGY. NGLAEVGKKFEKDTGIKVTVE. . HPDKLEEKFPQVAATGDGPDIIF.
Query Conservation   
 

       .  
      


  



   ..  

   

  
  

  


  .
Alig confidence 











.




















..






















.
Template Conservation 


 
                 

    
 
            

      
  

 
  
Template Sequence  KITVWTHFGGPELEWLKEQARTFERTSGTKVEVVEVPFAEIKQKFILGAPQGQAADLVVT
Template Known Secondary structure 



TTS



GGGT
S
S
Template Predicted Secondary structure 














Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   63......70.........80.. .......90.........100.........110.........120
Predicted Secondary structure 









..




Query SS confidence 



















. .





































Query Sequence  WAHDRFGGYAQSGLLAEITP. . DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNK
Query Conservation              
 
 

  ..     
            


 



       
 


Alig confidence 



















..





































Template Conservation              
 
  
                       
  
 

         


Template Sequence  VPHDWVGEMAQAGVLEPVGKYVTQAYLADLQGVAVEAFTFGGRLMGLPAFAESVALIYNK
Template Known Secondary structure  GGGTT
B


GGGS
B
TTT
S

T
Template Predicted Secondary structure 






















Template SS confidence 



























































   62.......70.........80.........90.........100.........110.........120.
 
   121........130.........140.........150.........160.........170....... .
Predicted Secondary structure 




















..
Query SS confidence 
























































. .
Query Sequence  DLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKY. . D
Query Conservation 


 


 




   




  
                 
   

       
  ..
Alig confidence 
























































..
Template Conservation 
     
 
 

       
                                        
Template Sequence  KYVKEPPRTWEEFLALAQKLTTGATFGFLYNIGDPYFNFGFFKAFGAENVFAKDAKGNLD
Template Known Secondary structure  TT
SS

SS
SSS


TT
T
SSSTTT
Template Predicted Secondary structure 
























Template SS confidence 



























































   122.......130.........140.........150.........160.........170.........180.
 
   179180.........190.........200........ .210.........220.........230.......
Predicted Secondary structure 














.






Query SS confidence 





























.




























Query Sequence  IKDVGVDNAGAKAGLTFLVDLIKNKHMNAD. TDYSIAEAAFNKGETAMTINGPWAWSNID
Query Conservation       
 

   


     
   
     .         
  

 

 
 
 
      
Alig confidence 





























.




























Template Conservation                
     
                      
  
             
Template Sequence  PTKLLIGGEVGEKALQFIKDLRFKYNLVPEGVDYGVADGAFKDGALAMILNGPWALGDYK
Template Known Secondary structure  SSSTS

S
TT

T

GGG
Template Predicted Secondary structure 
























Template SS confidence 



























































   182.......190.........200.........210.........220.........230.........240.
 
   238.240.........250.. .......260.........270.........280.........290.....
Predicted Secondary structure 









..












Query SS confidence 














. .










































Query Sequence  TSKVNYGVTVLPTFK. . GQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVN
Query Conservation        


 

   ..
       
     
 
 






  

   
 
 
      
Alig confidence 














..





























.











Template Conservation                                 
   
   


  

 . 
 
 
 
    
Template Sequence  KAKVDFGIAPFPVPPGAKNPWGPFLGVQGVVVNAYSKNKTQAVNFAK. TLVTGRNLVAFN
Template Known Secondary structure  TT






TT
SS



BTT
TT.TS
Template Predicted Secondary structure 






















.

Template SS confidence 



























































   242.......250.........260.........270.........280........ .290.........300
 
   296...300.........310.........320.........330.........340.........350.. ..
Predicted Secondary structure 
























.

Query SS confidence 
























































.

Query Sequence  KDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAA. SG
Query Conservation        
    
       

      
    
   
 

    
   
  

  
 . 
Alig confidence 














.








































.

Template Conservation     
  
        .                    
                      
Template Sequence  QAGGRIPVSKSAVKQ. LEKDPVVAGFSKVFPLGAPMPNIPEMGKVWGPWGNAISLAIQRP
Template Known Secondary structure  S


B.TTTSTTGGG



STT
T
Template Predicted Secondary structure 






.










Template SS confidence 



























































   301........310..... ....320.........330.........340.........350.........
 
   355....360.........370...
Predicted Secondary structure 







Query SS confidence 


















Query Sequence  RQTVDAALAAAQTNAAAKV
Query Conservation    
 



  

  
 
 
Alig confidence 


















Template Conservation        

          
Template Sequence  DSNVKKIVEDMVAEIKKAI
Template Known Secondary structure  T

Template Predicted Secondary structure 



Template SS confidence 


















   360.........370........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D