Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank31Aligned Residues366
% Identity98%Templatec3csgA_
PDB info PDB header:de novo protein, sugar binding proteinChain: A: PDB Molecule:maltose-binding protein monobody ys1 fusion; PDBTitle: crystal structure of monobody ys1(mbp-74)/maltose binding2 protein fusion complex
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHD
Query Conservation   
 

         
      


  



     

   

  
  

  


      
Alig confidence 



























































Template Conservation   
 

           
    


 




      
   

    


  


      
Template Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHD
Template Known Secondary structure 


TTS





TTTTT
S
S
Template Predicted Secondary structure 


















Template SS confidence 



























































   6...10.........20.........30.........40.........50.........60.....
 
   67..70.........80.........90.........100.........110.........120......
Predicted Secondary structure 













Query SS confidence 



























































Query Sequence  RFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP
Query Conservation          
 
 

       
            


 



       
 





 

Alig confidence 



























































Template Conservation          
 
  
       
            


 



       
 





 
 
Template Sequence  RFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP
Template Known Secondary structure  TT
B





TTB
TTTT
S

TTT
SS
Template Predicted Secondary structure 















Template SS confidence 



























































   66...70.........80.........90.........100.........110.........120.....
 
   127..130.........140.........150.........160.........170.........180......
Predicted Secondary structure 



























Query SS confidence 



























































Query Sequence  PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDN
Query Conservation 
 




   




  
                 
   

       
  
     
 
Alig confidence 



























































Template Conservation 
 




   
 


  
                     

                
 
Template Sequence  PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDN
Template Known Secondary structure 
SBGGGTTT



TT
TT

SSSSSS
Template Predicted Secondary structure 





























Template SS confidence 



























































   126...130.........140.........150.........160.........170.........180.....
 
   187..190.........200.........210.........220.........230.........240......
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  AGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVT
Query Conservation 
   


     
   
              
  

 

 
 
 
            


Alig confidence 



























































Template Conservation 
    

     
   
              
  
  

   
 
             
 
Template Sequence  AGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVT
Template Known Secondary structure  TTSS
TT

TT

GGGT

Template Predicted Secondary structure 



















Template SS confidence 



























































   186...190.........200.........210.........220.........230.........240.....
 
   247..250.........260.........270.........280.........290.........300......
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  VLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALK
Query Conservation   

   
       
     
 
 






  

   
 
 
            
    
Alig confidence 



























































Template Conservation    
   
       
     
   






  

     
 
                 
Template Sequence  VLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALK
Template Known Secondary structure 


TT


BTT
TTTTSSS


SB
Template Predicted Secondary structure 



























Template SS confidence 



























































   246...250.........260.........270.........280.........290.........300.....
 
   307..310.........320.........330.........340.........350.........360......
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  SYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQ
Query Conservation 
       

      
    
   
 

    
   
  

  
  
  
 



  

Alig confidence 



























































Template Conservation           
               
  
    
   
  

  
  
  
 



 


Template Sequence  SYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQ
Template Known Secondary structure  TTSS


STTTSS
Template Predicted Secondary structure 


















Template SS confidence 



























































   306...310.........320.........330.........340.........350.........360.....
 
   367..370..
Predicted Secondary structure 




Query SS confidence 





Query Sequence  TNAAAK
Query Conservation    
 
 
Alig confidence 





Template Conservation    
   
Template Sequence  TRITKG
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 





   366...370.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D