Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence28.88%DateSun Sep 7 16:46:09 BST 2014
Rank326Aligned Residues176
% Identity11%Templatec1njjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   376...380.........390....... ..400.........410.........420.........430....
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Query Sequence  LGVDFDNTTMLQMVENIKTFFA. NQSTNNLFIVTANPEIVNYATTHQAYLELINQASYIV
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Template Sequence  KGDPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDW. . . . . . . RVLGTLAALGTGFD
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TTGGG


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   28.30.........40.........50.........60...... ...70.........80
 
   435....440.........450..... ....460.........470.........480.........490...
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Query Sequence  ADGTGVVKASHRLKQPLAHRI. PGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQ
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Template Sequence  CASNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTF. DCVDELEKVAKTHP
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STT

GGG

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   8990.........100.........110.........120.........130... ......140.......
 
   494.....500... ......510.........520.........530...... ..
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Query Sequence  QRYPNISFAH. HHGYIDLEDETVVKRIKLFKPDYIFVGMGFPKQ. . . . . . . . . . . . . . EE
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Template Sequence  KAKMVLRISTVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRF
Template Known Secondary structure  T
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S
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GGGTT





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   148.150.........160.........170.........180.........190.........200.......
 
   539540.........550.........
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Query Sequence  WIMTHENQFESTVMMGVGGSL
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Template Sequence  VFDMGTELGFNMHILDIGGGF
Template Known Secondary structure  TT








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   218.220.........230........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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