Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence60.07%DateSun Sep 7 16:46:09 BST 2014
Rank205Aligned Residues174
% Identity11%Templatec4p98A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:extracellular solute-binding protein; PDBTitle: abc transporter system solute-bindng protein from conexibacter woesei2 dsm 14684
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380.........390.........400.........410...
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Query Sequence  GRQTVDAALAAAQTNAAAKVDILGVDFDNTTMLQMVENIKTFFANQSTNNLFIVTANPEI
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Template Sequence  NDGAFNAWAAEAAERLKADGADVQIRQGLADPTQAEPVIRQFAARGFD. . . LVVGHGIDV
Template Known Secondary structure  TSSSGGGT






STT
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   45....50.........60.........70.........80.........90.. .......100.
 
   414.....420.........430.........440.........450.........460.........470...
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Query Sequence  VNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHVNHQ
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Template Sequence  SEPI. . . LRVATEFPDVHFSASGDATLAERLPPNVDGWTYDFGQLGYLDGFVAGSLRGVE
Template Known Secondary structure  ...TT
TTS

GGGGGG

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   102... ....110.........120.........130.........140.........150........
 
   474.....480...... ...490.........500... ......510... ......520.....
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Query Sequence  KVFLLGATNEVVE. . . . . AAQYALQQRYPNISFAH. . HHGYIDLEDE. TVVKRIKLFKPD
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Template Sequence  KVGAVGGPQLPFVLATHKGIRAGLKAANPRASYEETYTGRFYDLQKEQEAARGLLDKGAQ
Template Known Secondary structure  SS


TT

SSSS
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   159160.........170.........180.........190.........200.........210........
 
   526...530...
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Query Sequence  YIFVGMGF
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Template Sequence  LLVATDDG
Template Known Secondary structure  SSS

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   219220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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