Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence74.10%DateSun Sep 7 16:46:09 BST 2014
Rank159Aligned Residues194
% Identity11%Templatec4n0qD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:leu/ile/val-binding protein homolog 3; PDBTitle: crystal structure of an abc transporter, substrate-binding protein2 from brucella melitensis 16m in complex with l-leucine using a3 crystal grown in a crystal former (microlytic)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   359360.........370.........380 .........390.........400.........410..
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Query Sequence  DAALAAAQTNAAAKVDILGVDF. . . . . . DNTTMLQMVENIKTFFANQSTNNLFIVTANPE
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Template Sequence  KKGAETAVEVINKAGGIKGEKVVLKFADDAGEPKQGVSAANQIVGDG. . IKFVVGLVTTG
Template Known Secondary structure  TT
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   45....50.........60.........70.........80.........90. ........100..
 
   413......420.........430.........440.........450........ .460.........470
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Query Sequence  IVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGI. . ELMDECLKIAHV
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Template Sequence  VA. . . . . . VPVSDVLSENGVLMVTPTATGPDLTARGLENVFRTCGRDGQQAEVMADYVLK
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   103. .....110.........120.........130.........140.........150......
 
   471........480.........490...... ...500... ......510.........520....
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Query Sequence  . . NHQKVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRIKLFKP
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Template Sequence  NMKDKKVAVIHDKGAYGKGLADAFKAAINKGGITEVHYDSVTPGDKDFSALVTKLKSAGA
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   157..160.........170.........180.........190.........200.........210......
 
   525....530.........540.........550.........560
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Query Sequence  DYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  EVVYFGGYHAEGGLLSRQLHDAGMQALVLGGEGLSN
Template Known Secondary structure  SS
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   217..220.........230.........240.........250..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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