Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence35.17%DateSun Sep 7 16:46:09 BST 2014
Rank296Aligned Residues197
% Identity9%Templatec3hutA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from rhodospirillum rubrum
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380. ........390.........400.........410.
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Query Sequence  VDAALAAAQTNAAAKVDILGVDFD. . . . . . NTTMLQMVENIKTFFANQSTNNLFIVTANP
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Template Sequence  FQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDP. . RVVGVLGDFS
Template Known Secondary structure  TTTBTTB

TT

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   60.........70.........80.........90.........100....... ..110.......
 
   412.......420.........430.........440.........450.........460.........470.
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Query Sequence  EIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHVN
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Template Sequence  STVSX. . . . AAGSIYGKEGXPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWXIGD
Template Known Secondary structure  ....T

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GGGTTS
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   118.120.. .......130.........140.........150.........160.........170...
 
   472. ......480.........490....... ..500... ......510.........520......
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Query Sequence  HQ. KVFLLGATNEVVEAAQYALQQRYP. . NISFAH. . HHGYIDLEDETVVKRIKLFKPDY
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Template Sequence  GFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEAPQA
Template Known Secondary structure  T

SSTT

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   174.....180.........190.........200.........210.........220.........230...
 
   527..530.........540.........550.........560
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Query Sequence  IFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  IYLAXAYEDAAPFLRALRARGSALPVYGSSALYS
Template Known Secondary structure  S
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GGG
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   234.....240.........250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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