Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence40.91%DateSun Sep 7 16:46:09 BST 2014
Rank264Aligned Residues124
% Identity15%Templatec4mnpA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:n-acetylneuraminate-binding protein; PDBTitle: structure of the sialic acid binding protein from fusobacterium2 nucleatum subsp. nucleatum atcc 25586
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10....... ..20.........30... ......40.... .....50......
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Query Sequence  EGKLVIWINGDKG. . . YNGLAEVGKKFEKDTG. . IKVTVEHPDKL. . . EEKFPQVAATGD
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Template Sequence  KYNLKMGMTAGTSQNEYKAAEVFAKELKKRSNGEIELKLYPNAQLGKDDLAMMQQLEGGA
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   3......10.........20.........30.........40.........50.........60..
 
   57..60.........70.........80.. .......90.........100........
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Query Sequence  GPDIIFWAHDRFGGYAQSGLLAEITP. . . . . . . . DKAFQDKLYPFTWDAVRYNGKLIAYP
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Template Sequence  L. DFTFAETGRFSTFFPEAEVFTLPYMIKDFNHMKKAVNTKFGKDLFKKVHDKKGMTVLA
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GGGGGGTSGGGGGGGSTTT

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   63 ......70.........80.........90.........100.........110.........120.
 
   109110.........120.........130...
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Query Sequence  IAVEALSLIYNKDLLPNPPKTWEEI
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Template Sequence  QAYNGTRQTTSN. . . . KAIKSLADM
Template Known Secondary structure  S....S

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   122.......130... ......140..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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