Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank35Aligned Residues364
% Identity98%Templatec3ehuA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:fusion protein of crfr1 extracellular domain and mbp; PDBTitle: crystal structure of the extracellular domain of human corticotropin2 releasing factor receptor type 1 (crfr1) in complex with crf
Resolution1.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII
Query Conservation 
 
 
 
 

         
      


  



     

   

  
  

  


 
Alig confidence 



























































Template Conservation    
 
 
 

         
      



 



          

     

  


 
Template Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII
Template Known Secondary structure 


TTS

TTS





TTTTT
S
S
Template Predicted Secondary structure 














Template SS confidence 



























































   -348.......-340.........-330.........-320.........-310.........-300.........-290.
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 














Query SS confidence 



























































Query Sequence  FWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
Query Conservation               
 
 

       
            


 



       
 



Alig confidence 



























































Template Conservation               
 
  
       
            


 



       
 



Template Sequence  FWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
Template Known Secondary structure  GGGTT
B





TTB
TTT
S

TT
Template Predicted Secondary structure 




















Template SS confidence 



























































   -288.......-280.........-270.........-260.........-250.........-240.........-230.
 
   122.......130.........140.........150.........160.........170.........180.
Predicted Secondary structure 
























Query SS confidence 



























































Query Sequence  LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
Query Conservation 

 


 




   




  
                 
   

       
  
   
Alig confidence 



























































Template Conservation 

   
 




   

 
   
                      
              
Template Sequence  LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
Template Known Secondary structure  T
SS

SBGGGTTT



SSSTTTTTT
TT
Template Predicted Secondary structure 


























Template SS confidence 



























































   -228.......-220.........-210.........-200.........-190.........-180.........-170.
 
   182.......190.........200.........210.........220.........230.........240.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
Query Conservation    
 

   


     
   
              
  

 

 
 
 
          
Alig confidence 



























































Template Conservation            

     
                  
  
  

 
 
 
          
Template Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
Template Known Secondary structure  TTSTTSS
TT

TT

GGGT
Template Predicted Secondary structure 




















Template SS confidence 



























































   -168.......-160.........-150.........-140.........-130.........-120.........-110.
 
   242.......250.........260.........270.........280.........290.........300.
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
Query Conservation    


 

   
       
     
 
 






  

   
 
 
            
Alig confidence 



























































Template Conservation 
  

  
   
       
     
   


 


  


    
 
            
Template Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
Template Known Secondary structure 



BBTTB



BTT
S
TTSSS


Template Predicted Secondary structure 
























Template SS confidence 



























































   -108.......-100.........-90.........-80.........-70.........-60.........-50.
 
   302.......310.........320.........330.........340.........350.........360.
Predicted Secondary structure 
























Query SS confidence 



























































Query Sequence  AVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAA
Query Conservation 
    
       

      
    
   
 

    
   
  

  
  
  
 


Alig confidence 














.........



































Template Conservation 
              .........  
   
  
    
   
  


 
  
  




Template Sequence  AVALKSYEEELAKDP. . . . . . . . . RIGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEA
Template Known Secondary structure  SBTT
S.........






TTTTSS
Template Predicted Secondary structure 


.........













Template SS confidence 



























































   -48.......-40...... ...-30.........-20.........-10.........0..
 
   362.......370....
Predicted Secondary structure 




Query SS confidence 












Query Sequence  LAAAQTNAAAKVD
Query Conservation 
  

  
 
 
 
Alig confidence 












Template Conservation 
  

  
   
 
Template Sequence  LKDAQTNAAAEFD
Template Known Secondary structure  TTT

Template Predicted Secondary structure 
Template SS confidence 












   12.......20....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D