Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence99.97%DateSun Sep 7 16:46:09 BST 2014
Rank95Aligned Residues301
% Identity16%Templated1xc1a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30......... 40.........50.........60....
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Query Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVE. . HPDKLEEKFPQVAATGDGPDIIFWA
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Template Sequence  DITVYNGQHK. . EAAQAVADAFTRATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQ
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   1........10 .........20.........30.........40.........50........
 
   65....70.........80.........90.........100.........110.........120....
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Query Sequence  HDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP
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Template Sequence  IPALATLSAANLLEPLPA. . . . . STINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLS
Template Known Secondary structure  TT
B



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TTS


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   5960.........70...... ...80.........90.........100.........110...
 
   125. ...130.........140.........150.........160.........170.........180..
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Query Sequence  NP. . PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
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Template Sequence  EKDLEKSVLNYATPKWKNR. . . . . . IGYVPTSGAFLEQIVAI. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGS
SSGGGGSSGGGTTT......
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   114.....120.........130.. .......140.........
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
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Template Sequence  . VKLKGEAAALKWLKGLKEYGKPYA. . KNSVALQAVENGEIDAALINNYYWHAFAREKGV
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   150.........160.........170... ......180.........190.........200......
 
   243...... 250.........260.........270.........280.........290.........300.
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Query Sequence  YGVTVLP. TFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
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Template Sequence  QNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVA. FLAGKEGQRALTAVRAEY
Template Known Secondary structure  GG




TT
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   207..210.........220.........230.........240....... ..250.........260.....
 
   302.......310.........320.........330.........340.......
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Query Sequence  AVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTA
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Template Sequence  PLNPHVVST. . . . . FNLEPIAKLEAPQVSATTVSEKEHATRLLEQA
Template Known Secondary structure  SSTT


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GGGS








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   266...270.... .....280.........290.........300......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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