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Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank91Aligned Residues278
% Identity17%Templatec2pt1A_
PDB info PDB header:metal transportChain: A: PDB Molecule:iron transport protein; PDBTitle: futa1 synechocystis pcc 6803
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30......... 40.........50.........60..
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Query Sequence  EGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVE. . HPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  QQEINLYSSRHY. . NTDNELYAKFTAETGIKVNLIEGKADELLERIKSEGANSPADVLLT
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   44.....50..... ....60.........70.........80.........90.........100.
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
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Template Sequence  VDLARLWRAEEDGIFQPVQS. . . . . . EILETNVPEYLRSPDGMWFGFTKRARVIMYNKGK
Template Known Secondary structure  STT
B




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GGGB
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   102.......110.........120. ........130.........140.........150.....
 
   123... ...130.........140.........150.........160.........170.........180.
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Query Sequence  LPNP. PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
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Template Sequence  VKPEELSTYEELADPKWKGR. . . . . . VIIRSSSNEYNQSLVASL. . . . . . . . . . . . . . . .
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GGG


SGGGGSGGGTT
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   156...160.........170..... ....180.........190...
 
   182.......190.........200.........210.........220.........230.........240.
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Query Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
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Template Sequence  . . VVADGEESTLAWAKGFVSNFAREPQGNDTAQIEAVSSGEADLTLANTYYMGRLLESED
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S
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   194.....200.........210.........220.........230.........240.........250.
 
   242 .......250.........260.........270.........280.........290......
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Query Sequence  N. . . . . YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNK
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Template Sequence  PAQKAIAENVGVFFPNQEGRGTHVNVSGVGVVKTAPNREGAVKFIE. FLVSEPAQAFLAQ
Template Known Secondary structure  T


TTTT
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   252.......260.........270.........280.........290....... ..300.........310
 
   297..300.........310.....
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Query Sequence  DKPLGAVALKSYEEELAKD
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Template Sequence  NNYEYPVLAGVPLNKSVAS
Template Known Secondary structure 

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T
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   311........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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