Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence50.93%DateSun Sep 7 16:46:09 BST 2014
Rank231Aligned Residues196
% Identity10%Templatec4n03A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc-type branched-chain amino acid transport systems PDBTitle: fatty acid abc transporter substrate-binding protein from2 thermomonospora curvata
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.. .......380.........390.........400.........410
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Query Sequence  VDAALAAAQTNAAAK. . . . . . . VDILGVDFDNTTMLQMVENIKTFFANQSTNNLFIVTAN
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Template Sequence  ITQAQQLYYEEVNQRGGVCGRTIEAVVRD. HGYDPQKAVSIYTELN. . . NNVLAIPHFLG
Template Known Secondary structure  TT
BTTB.
TT
T...TT
S

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   71........80.........90......... 100.........110..... ....120......
 
   411........420.........430.........440.........450.........460.........470
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Query Sequence  PEIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHV
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Template Sequence  SPXVSAV. . . KQRIESDKXFTIPSAWTTALLGSKYIQVTGTTYDVDXINGVQWLXDKKLI
Template Known Secondary structure  ...T




GGG
S
TTB


S

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   127..130... ......140.........150.........160.........170.........180...
 
   471.. ......480.........490....... ..500... ......510.........520......
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Query Sequence  NHQ. KVFLLGATNEVVEAAQYALQQRYP. . NISFAH. HHGYIDLEDETVVKRIKLFKPDY
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Template Sequence  KKGDKLGHVYFEGDYGGSALRGTKYAAEQLGLEVFELPIKPTDRDXKSQVAALAKEKVDA
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TT
TTT

TT



TT
S
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   184.....190.........200.........210.........220.........230.........240...
 
   527..530.........540.........550.........560
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Query Sequence  IFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  ILLSAGPQQAASLAGIARSQGXKQPILGSNSAYS
Template Known Secondary structure  S
TT




TTS

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   244.....250.........260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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