Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank37Aligned Residues362
% Identity90%Templatec4dxbB_
PDB info PDB header:sugar binding protein, hydrolaseChain: B: PDB Molecule:maltose-binding periplasmic protein, beta-lactamase tem PDBTitle: 2.29a structure of the engineered mbp tem-1 fusion protein rg13 in2 complex with zinc, p1 space group
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII
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Template Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII
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TTTT
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   1........10.........20.........30.........40.........50.........60
 
   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  FWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
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Template Sequence  FWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
Template Known Secondary structure  STTTT
B





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   61........70.........80.........90.........100.........110.........120
 
   122.......130.........140.........150.........160.........170.........180.
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Query Sequence  LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
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Template Sequence  LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
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SBSTTTTT




SSTT
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   121........130.........140.........150.........160.........170.........180
 
   182.......190.........200.........210.........220.........230.........240.
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Query Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
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Template Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
Template Known Secondary structure  SSSTTSS
TT

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   181........190.........200.........210.........220.........230.........240
 
   242.......250.........260.........270.........280.........290.........300.
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Query Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
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Template Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLG
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BBTTB



BTT
S
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S
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   241........250.........260.........270.........280.........290.........300
 
   302.......310.........320 .........330.........340.........350......
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Query Sequence  AVALKSYEEELAKDPRIAA. . . . . TMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQ
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Template Sequence  AVALKSYEEELAKDPRWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTG. . . . SQA
Template Known Secondary structure  SBTT
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TTTTGGG
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   301........310.........320.........330.........340.........350... ...
 
   357..360.......
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Query Sequence  TVDAALAAAQT
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Template Sequence  TMDERNRQIAE
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   357..360.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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