Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank65Aligned Residues358
% Identity18%Templatec3vxbA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:putative sugar-binding lipoprotein; PDBTitle: crystal structure of bxle from streptomyces thermoviolaceus opc-520
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20........ .30......... 40.........50.........
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Query Sequence  KLVIWINGDKGYNGLAEVGKKF. . . . . EKDTGIKVTVE. . HPDKLEEKFPQVAATGDGPD
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Template Sequence  TITAMVYGDDAVKVQDKAASRFNASAEAKKANAKVKMERIPASDYPAKLRTAMGSPNAPD
Template Known Secondary structure 

STTST


GGGTSTT

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   38.40.........50.........60.........70.........80.........90.......
 
   60... ......70.........80.. .......90.........100......... 110...
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Query Sequence  IIFW. AHDRFGGYAQSGLLAEITP. . . . DKAFQDKLYPFTWDAVRYNGKLIAYPI. AVEA
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Template Sequence  IFFNWGGGSIKAYKEAGQLVDLTDVIKSDEVLSTGFLPSVVAAGSLDGHEYGIPMRGMQP
Template Known Secondary structure 
SGGGGTT
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TSB
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   98.100.........110.........120.........130.........140.........150.......
 
   114.....120.... .....130.........140.........150..... ....160.....
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Query Sequence  LSLIYNKDLLP. . . . NPPKTWEEIPALDKELKAKGKSALMFNLQEP. . . . YFTWPLIAAD
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Template Sequence  VLLFYNKSVFAEHKLTPPTTWDQLLDNVAKLKKAGVTPFALGGVEIWPELMWLEYLVDRI
Template Known Secondary structure  TT



SBTTS


TTTS
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   158.160.........170.........180.........190.........200.........210.......
 
   166...170.........180.........190.........200....... ..210.........220
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Query Sequence  GGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA. . . . . DTDYSIAEAAFNK
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Template Sequence  GGPQVFDK. . IRNGDASGWGDPAVLKAAQTVKQLVDEGAFGKGFSSVSYNNGGAPALLAK
Template Known Secondary structure 
..TT
GGGGGSTTTT
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   218.220..... ....230.........240.........250.........260.........270.....
 
   221........230.........240. ........250..... ....260.........270.
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Query Sequence  GETAMTINGPWAWSNIDTSKV. . . . . NYGVTVLPTFKGQP. . . . SKPFVGVLSAGINAAS
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Template Sequence  GKAGMHLMGSWEYSTQLGKFPDFAKKDLGWCAFPSFEGGAGDIRNVVGNPCNYWSVNART
Template Known Secondary structure  TSTTST


B
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   276...280.........290.........300.........310.........320.........330.....
 
   272.......280.........290.........300.........310...... ...320.......
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Query Sequence  PNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDP. . . . RIAATMENAQK
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Template Sequence  GNKDGAIAFLR. DCASEAYTKDLIDNGDVPTTTIAENMLDSSPNPEFAKFQYQLVQKAPN
Template Known Secondary structure  TT.TTSTT



BSGGGGTGGGSSS
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   336...340...... ...350.........360.........370.........380.........390....
 
   328.330.........340.........350.........360.......
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Query Sequence  GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQT
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Template Sequence  FTLSWDQAVDPDWQQPMLTEINKLFVGKSSPEQFVSALKG
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   395....400.........410.........420.........430....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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