Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence68.98%DateSun Sep 7 16:46:09 BST 2014
Rank174Aligned Residues172
% Identity16%Templatec3vndD_
PDB info PDB header:lyaseChain: D: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of tryptophan synthase alpha-subunit from the2 psychrophile shewanella frigidimarina k14-2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370..... ....380 .........390.
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Query Sequence  SGRQTVDAALAAAQTNAAAKVDI. . LGVDF. . . . . . . . . . . . . . . . . . . DNTTMLQMVEN
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Template Sequence  IGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDI
Template Known Secondary structure  TTSS
TT
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   26...30.........40.........50.........60.........70.........80.....
 
   392.......400......... 410.........420.........430.. .... ...440..
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Query Sequence  IKTFFANQSTNNLFIVTA. NPEIVNYATTHQAYLELINQASY. . . IVAD. . . . . GTGVVK
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Template Sequence  ITKVRAQHPDMPIGLLLYANLVFANGI. . . DEFYTKAQAAGVDSVLIADVPVEESAPFSK
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GGG
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   86...90.........100.........110.. .......120.........130.........140..
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  ASHRLKQPLAHRIPGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQRYPNISFA
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Template Sequence  AAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTPIENILTQLAEFNAPPPL
Template Known Secondary structure  TT


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   143......150.........160.........170.........180.........190.........200..
 
   503......510.........520.........530
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Query Sequence  HHHGYIDLEDETVVKRIKLFKPDYIFVG
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Template Sequence  LGFGI. . . AEPEQVRAAIKAGAAGAISG
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   211.... ....220.........230.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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