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Job Description | multi-dom | Confidence | 79.46% | Date | Sun Sep 7 16:46:09 BST 2014 |
Rank | 150 | Aligned Residues | 68 |
% Identity | 21% | Template | c4oteA_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:lipoprotein; |
PDBTitle: crystal structure of a putative lipoprotein (cd630_1653) from2 clostridium difficile 630 at 2.20 a resolution
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Resolution | 2.20 Å |
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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | G | K | L | V | I | W | I | N | G | D | K | G | Y | N | G | L | A | E | V | G | K | K | F | E | K | D | T | G | I | K | V | T | V | E | H | P | D | K | L | E | E | K | F | P | Q | V | A | A | T | G | D | G | P | D | I | I | F | W | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | K | K | I | V | V | G | A | T | L | V | P | G | G | E | L | L | . |
E | E | L | K | P | L | I | K | E | K | G | Y | T | L | E | V | K | N | F | D | D | Y | I | . |
L | P | N | E | A | L | N | N | G | E | I | . |
D | A | N | L | F | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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. | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . |
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65 | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | D | R | F | G | G | Y | A | Q | S | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | E | P | Y | L | K | E | A | V | K | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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85 | . | . | . | . | 90 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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