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Job Descriptionmulti-dom
Confidence77.54%DateSun Sep 7 16:46:09 BST 2014
Rank155Aligned Residues199
% Identity10%Templatec4mlcA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: abc transporter substrate-binding protein fromdesulfitobacterium2 hafniense
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   356...360.........370.........380.. .......390.........400.........
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Query Sequence  QTVDAALAAAQTNAAAKVDILGVDFDN. . . . . . TTMLQMVENIKTFFANQSTNNLFIVTA
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Template Sequence  DLFAEGLELAVQEINEQGGVQGRKLSLVKADDEAELEKGLAIAQAFADNA. . GIQAVIGH
Template Known Secondary structure  SSTTTTBTTB
TT
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   21........30.........40.........50.........60.........70 ........
 
   410.........420.........430.........440.........450.........460.........
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Query Sequence  NPEIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAH
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Template Sequence  RNSFISIP. . . AASIYDQAGLVXLSPASTSPDLTDHGYIHVFRNIPSDQEIARQLAIYLA
Template Known Secondary structure  SS...T
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GGGGSS

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   7980...... ...90.........100.........110.........120.........130.....
 
   470... ......480.........490...... ...500... ......510.........520....
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Query Sequence  VNHQ. KVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRIKLFKP
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Template Sequence  EQGHERXVIYYTDDSYGNGLANAFEDYARAQGITIVDRFNYYGNLKDLERLYDKWQAFGX
Template Known Secondary structure  TT


SSTT
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   136...140.........150.........160.........170.........180.........190.....
 
   525....530.........540.........550.........
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Query Sequence  DYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSL
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Template Sequence  DGIFIAKTATGGGTEFLVDAKSVGIEVPLIAGNSW
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TTTTT

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   196...200.........210.........220.........230
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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