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Job Description | multi-dom | Confidence | 25.33% | Date | Sun Sep 7 16:46:09 BST 2014 |
Rank | 353 | Aligned Residues | 91 |
% Identity | 12% | Template | c4ms3A_ |
PDB info |
PDB header:signaling protein/agonist | Chain: A: PDB Molecule:gamma-aminobutyric acid type b receptor subunit 1; |
PDBTitle: crystal structure of the extracellular domain of human gaba(b)2 receptor bound to the endogenous agonist gaba
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Resolution | 2.50 Å |
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456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | |
. | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | G | I | E | L | M | D | E | C | L | K | I | A | H | V | N | H | Q | . |
K | V | F | L | L | G | A | T | N | E | V | V | E | A | A | Q | Y | A | L | Q | Q | R | Y | P | N | I | S | F | A | H | . |
H | H | G | Y | I | D | L | E | D | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | A | T | L | H | N | P | T | R | V | K | L | F | E | K | W | G | W | K | K | I | A | T | I | Q | Q | T | T | E | V | F | T | S | T | L | D | D | L | E | E | R | V | K | E | A | G | I | E | I | T | F | R | Q | S | F | F | S | D | P | A |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
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514 | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | V | V | K | R | I | K | L | F | K | P | D | Y | I | F | V | G | M | G | F | P | K | Q | E | E | W | I | M | T | H | E | N | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | P | V | K | N | L | K | R | Q | D | A | R | I | I | V | G | L | F | Y | E | T | E | A | R | K | V | F | C | E | V | Y | K | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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