Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence98.70%DateSun Sep 7 16:46:09 BST 2014
Rank118Aligned Residues226
% Identity18%Templatec4gd5B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:phosphate abc transporter, phosphate-binding protein; PDBTitle: x-ray crystal structure of a putative phosphate abc transporter2 substrate-binding protein with bound phosphate from clostridium3 perfringens
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30. ........40.........50.........60.....
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Query Sequence  KLVIWINGDKGYNGLAEVGKKFEKD. TGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAH
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Template Sequence  SVSISGSTSV. GPVXEAEAEAFKTKKPDVSIEINQIGS. . SAGIKNAXEGV. SEIGXASR
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TTT.
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   35....40.... .....50.........60.........70. ........80.. .......90
 
   66...70.........80.........90.........100.........110.........120....
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Query Sequence  DRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP.
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Template Sequence  DLKGEEKQAGL. . . . . . . . . . . . . . . . . . . . . . . . . . . . KEVEIAYDGIALITHKNNPVK
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TT

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   91........100. ........110.........120..
 
   125....130.........140.........150.........160.........170..
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Query Sequence  . . . . . . . . . . . . NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKY
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Template Sequence  DLTLVQIKDIYTGKITNWKEL. . . . . . GGNDAPIVVVSREDGSGTRDAFQEIVGFKAEEL
Template Known Secondary structure 
TTS

BGGGG......TS
SSB

TT
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GGGS
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   123......130.........140... ......150.........160.........170......
 
   173......180.........190.........200.........210.........220.........230..
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Query Sequence  ENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWA
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Template Sequence  TVNSQISDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGNIKSLVQGNENAIGYISFSY
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TT
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TTGGG
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   177..180..... ....190.........200.......
 
   233......240.........250.........260.........270.........280.........290..
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Query Sequence  WSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE
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Template Sequence  VDDSVSAVKVDGVEATPENVLNKSYKVSRPFLA. VYKEENLTESGKSFID. FILSEEGQD
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   208.210.........220.........230.........240 .........250...... ...260.....
 
   293......300.
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Query Sequence  AVNKDKPLG
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Template Conservation 
    
  
Template Sequence  IVAKEHLIK
Template Known Secondary structure  TT
B
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   266...270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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