Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence82.83%DateSun Sep 7 16:46:09 BST 2014
Rank144Aligned Residues200
% Identity13%Templatec3snrA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: rpd_1889 protein, an extracellular ligand-binding receptor from2 rhodopseudomonas palustris.
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ASGRQTVD. AALAAAQTNAAAKVDILGVDF. . . . . . DNTTMLQMVENIKTFFANQSTNNL
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Template Sequence  TTGPAAALGIPERNALEFVVKEIS. . GHPIKIIVLDDGGDPTAATTNARRFVTESKADVI
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SSTTGGGGS
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   3940.........50.........60.. .......70.........80.........90......
 
   405....410.........420.........430.........440.........450.........460....
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Query Sequence  FIVTANPEIVNYATTHQAYLELINQASYIVADGTGVVKASHRLKQPLAHRIPGIELMDEC
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Template Sequence  XGSSVTPPS. . . . . . . VAISNVANEAQIPHIALAPLPITPERAKWSVVXPQPIPIXGKVL
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   97..100..... ....110.........120.........130.........140.........
 
   465....470... ......480.........490...... ...500... ......510.........
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Query Sequence  LKIAHVNHQ. KVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRI
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Template Sequence  YEHXKKNNVKTVGYIGYSDSYGDLWFNDLKKQGEAXGLKIVGEERFARPDTSVAGQALKL
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   150.........160.........170.........180.........190.........200.........
 
   520.........530.........540.........550.........560
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Query Sequence  KLFKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  VAANPDAILVGASGTAAALPQTTLRERGYNGLIYQTHGAAS
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   210.........220.........230.........240.........250
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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