Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence41.34%DateSun Sep 7 16:46:09 BST 2014
Rank262Aligned Residues120
% Identity14%Templatec4pe3A_
PDB info PDB header:solute-binding proteinChain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit; PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_3620, target efi-510199), apo open3 structure
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30... ......40.... .....50.........60....
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Query Sequence  VIWINGDKGYNGLAEVGKKFEKDTG. . IKVTVEHPDKL. . EEKFPQVAATGDGPDIIFWA
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Template Sequence  SSDPAGNPNFELQHVFADKVKELTNGEVTIELXPVGTIVDYKETPDAIQAGLI. DGHITD
Template Known Secondary structure  SS
TT
TTTSS
TTSSS
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   55....60.........70.........80.........90.........100....... ..110...
 
   65....70.........80.. .......90.........100.........110.....
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Query Sequence  HDRFGGYAQSGLLAEITP. . . . . . . . . DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALS
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Template Sequence  TSYFAGRDPAFGLIANPVGAWADPAQXIDFVENGGGKELXNELINPYGLQFIGVSTPGLE
Template Known Secondary structure  GGGGTTT


TT

SSSSGGGT
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   114.....120.........130.........140.........150.........160.........170...
 
   116...120.........130...
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Query Sequence  LIYNKDLLPNPPKTWEEI
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Template Sequence  AFVSK. . . . VPLDTVEDL
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S....S


SGGGG
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   174.... .180.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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