Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence28.17%DateSun Sep 7 16:46:09 BST 2014
Rank331Aligned Residues124
% Identity15%Templatec4ovtA_
PDB info PDB header:solute-binding proteinChain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobacterium anthropi (oant_3902), target efi-510153, with bound l-3 fuconate
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EGKLVIWINGDKG. . . YNGLAEVGKKFEKDTG. . IKVTVEHPDKLE. . EKFPQVAATGDG
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Template Sequence  NVSIKVAYENNPGEPFDEVXHYWKDDLAKRSNGEITLELYPSSQLGSKKDVTEQAXXGLN
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   25....30.........40.........50.........60.........70.........80....
 
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Query Sequence  PDIIFWAHDRFGGYAQSGLLAEITP. . . . . . . . DKAFQDKLYPFTWDAVRYNGKLIAYPI
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Template Sequence  . VVTISDVGFLAEYDPDLGVLYGPFLTDDPAQLFKVYDGPWFKEKSEELKKKGIHIVXPN
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TTTSGGGGGGG
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   85....90.........100.........110.........120.........130.........140...
 
   110.........120.........130...
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Query Sequence  AVEALSLIYNKDLLPNPPKTWEEI
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Template Sequence  YLYGIRQIISK. . . . KPIRTPEDL
Template Known Secondary structure  S....S


SGGGG
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   144.....150.... .....160...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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