Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence61.95%DateSun Sep 7 16:46:09 BST 2014
Rank196Aligned Residues103
% Identity11%Templatec4mptA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative leu/ile/val-binding protein; PDBTitle: crystal structure of periplasmic binding protein type 1 from2 bordetella pertussis tohama i
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   458.460.........470.........480... ......490.........500... ......510..
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Query Sequence  IELMDECLKIAHVNHQKVFLLGATNE. . . . VVEAAQYALQQRYPNISFAH. HHGYIDLED
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Template Sequence  DIEAVAXGEYLAKKFKRVGIIHESTAYGVTGVDYLAASIAKNGGAKPVATDSYNQGAQDX
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   132.......140.........150.........160.........170.........180.........190.
 
   513......520.........530.........540.........550.........560
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Query Sequence  ETVVKRIKLFKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  TAQVARXKRANVDAIAAIGLGKDLAVLRRTXARLNVNVPLAASNGALG
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   192.......200.........210.........220.........230.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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