Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank71Aligned Residues348
% Identity14%Templatec4kysA_
PDB info PDB header:transferaseChain: A: PDB Molecule:thiamine pyridinylase i; PDBTitle: clostridium botulinum thiaminase i in complex with thiamin
Resolution2.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30 .........40.........50.........60..
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Query Sequence  EEGKLVIWINGDKGYNGLAEVGKKFEK. DTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  QTLNVALYEYVPDPIRFKKAVETEWNKKEPNIKLNFVDWDCYSED. . . . . . PPKDLDVFV
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   3940.........50.........60.........70.........80... ......90..
 
   63......70.........80.. .......90.........100.........110.........120.
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Query Sequence  WAHDRFGGYAQSGLLAEITP. DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
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Template Sequence  FDAVYLSHFVKEGYLSEIPEKDIKNKEDILPFAMEGCTIKGSAYAIPQIISTNLLFSRKG
Template Known Secondary structure  GGGTT
B

B
GGGSTTGGGB
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   93......100.........110.........120.........130.........140.........150..
 
   122.... ...130.........140... ......150...... ...160.........170.
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Query Sequence  LLPNP. PKTWEEIPALDKELKAK. . . . . GKSALMFNLQEPY. . . . FTWPLIAADGGYAFK
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Template Sequence  DYDIQKVNSVYDLYDKLGKFTSEDIILPNNKGLLIDMSGGTSKACMYLDSLIDTTQEYTK
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   153......160.........170.........180.........190.........200.........210..
 
   172.......180.........190.........200... ......210.........220........
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Query Sequence  YENGKYDIKDVGVDNAGAKAGLTFLVDLIKNK. . . HMNADTDYSIAEAAFNKGETAMTIN
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Template Sequence  FCSLP. . . . NLNELNKDAIESLVLLQSMAGKSQANYWPENNDSYIRAKWFINGKGRAYIG
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   213.... ..220.........230.........240.........250.........260........
 
   229230.........240.........250.........260 .........270.........280......
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Query Sequence  GPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFV. . GVLSAGINAASPNKELAKEFLENYLL
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Template Sequence  YTEAMSQMKEFANDIDFKTISLSKNSNIPIFYGDVVGINSSITNSYKKEKAIELAN. IIT
Template Known Secondary structure  GGGGGGSGGGGGG

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   269270.........280.........290.........300.........310.........320.... ...
 
   287..290.........300.........310.........320.........330.........340......
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Query Sequence  TDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRT
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Template Sequence  DKNTMVKAVSPDENNKYPQYLL. . . . . . . PARRSVYHNL. . . . . GNKYPIYGKLYKIADN
Template Known Secondary structure  SS
BTTB
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   328.330.........340......... 350......... 360.........370.....
 
   347..350.........360.........370....
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Query Sequence  AVINAASGRQTVDAALAAAQTNAAAKVD
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Template Sequence  SNNKLFRTGPEIREWLKQAKKIITEYLQ
Template Known Secondary structure  TT




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   376...380.........390.........400...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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