Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence62.51%DateSun Sep 7 16:46:09 BST 2014
Rank195Aligned Residues194
% Identity16%Templatec3t0nA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:twin-arginine translocation pathway signal; PDBTitle: crystal structure of twin-arginine translocation pathway signal from2 rhodopseudomonas palustris bisb5
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380. ........390.........400.........410.
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Query Sequence  VDAALAAAQTNAAAKVDILGVDFD. . . . . . NTTMLQMVENIKTFFANQSTNNLFIVTANP
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Template Sequence  IDNAIKLYIKKHGDT. . VAGKKIEVILKDDAAIPDNTKRLAQELIVNDKVNVIAGFGITP
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   50.........60.... .....70.........80.........90.........100.......
 
   412.......420.........430.. .......440.........450.........460.........470
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Query Sequence  EIVNYATTHQAYLELINQASY. IVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHV
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Template Sequence  AA. . . . . . . LAAAPLATQAKVPEIVXAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAK
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GGGGGG
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   108. 110.........120.........130.........140.........150.........160
 
   471.. ......480.........490...... ...500... ......510.........520.....
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Query Sequence  NHQ. KVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRIKLFKPD
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Template Sequence  NGIKKVATLTSDYAPGNDALAFFKERFTAGGGEIVEEIKVPLANPDFAPFLQRXKDAKPD
Template Known Secondary structure  TT

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   161........170.........180.........190.........200.........210.........220
 
   526...530.........540..... ....550.........560
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Query Sequence  YIFVGMGFPKQEEWIMTHEN. . . QFESTVMMGVGGSLE
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Template Sequence  AXFVFVPAGQGGNFXKQFAERGLDKSGIKVIGPGDVXD
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TT
TTGGGTT
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   221........230.........240.........250........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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