Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence28.87%DateSun Sep 7 16:46:09 BST 2014
Rank327Aligned Residues125
% Identity12%Templatec3c6cA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of a putative 3-keto-5-aminohexanoate cleavage2 enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 a3 resolution
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   455....460.........470.........480.........490...... ...500.. .......
Predicted Secondary structure 










....

.






Query SS confidence 









































. . . .





.






Query Sequence  IPGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQRY. . . . PNISFA. HHHGYID
Query Conservation 
 
 

   
             

            
    ....
     .   
   
Alig confidence 









































....





.






Template Conservation   
             
 

 

 

 
 
 
     
   
 
  
     


   
 
Template Sequence  LNTTRTLRAXARRFQELGIKPELEVFSPGDILFGKQLIEEGLIDGVPLFQXVLGVLWGAP
Template Known Secondary structure 


T
SSTT
S
SS

S
TTS

Template Predicted Secondary structure 























Template SS confidence 



























































   144.....150.........160.........170.........180.........190.........200...
 
   510.........520.........530.........540.........550.........560.....
Predicted Secondary structure 


















....
Query SS confidence 























































. . . .
Query Sequence  LEDETVVKRIKLFKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLEVFAGA. . . .
Query Conservation           
         
  
 
 

         
       

   
  

 ....
Alig confidence 























































....
Template Conservation   
   
   
  

    
 
 
 
         
   









 
    
  


Template Sequence  ASTETXIYQRNLIPANAQWAAFGIGRDQXPXXAQAALLGGNVRVGLEDNLYLSRGVFATN
Template Known Secondary structure  S
TTS
TTS

GGGT
BSTTT

TT

Template Predicted Secondary structure 
































Template SS confidence 



























































   204.....210.........220.........230.........240.........250.........260...
 
   566...570.........
Predicted Secondary structure  ...







Query SS confidence  . . .













Query Sequence  . . . KKRAPYIFRKLNIE
Query Conservation  ...  


       

Alig confidence  ...













Template Conservation 



   
 

   


Template Sequence  GQLVERARTVIEHLGXS
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 
















   264.....270.........280
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D