Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank53Aligned Residues356
% Identity28%Templatec1ursA_
PDB info PDB header:maltose-binding proteinChain: A: PDB Molecule:maltose-binding protein; PDBTitle: x-ray structures of the maltose-maltodextrin binding2 protein of the thermoacidophilic bacterium alicyclobacillus3 acidocaldarius
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10........ .20.........30... ...... 40.........50.........60..
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Query Sequence  KLVIWINGDKGY. NGLAEVGKKFEKDTG. IKVTVE. . HPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  TITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVF
Template Known Secondary structure  S




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   31........40.........50.........60.........70.........80.........90
 
   63......70.........80.........90.........100.........110.........120.
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Query Sequence  . WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD
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Template Sequence  GMPHDNNGVFAEEGLMAPVPSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKK
Template Known Secondary structure  GGGTT
B



TTS

GGGS
TTTT
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   91........100.........110.........120.........130.........140.........150
 
   122.......130.........140.........150.........160.........170.........180.
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Query Sequence  LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD
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Template Sequence  LVPQPPQTWAEFVKDANAHG. . . . . . FMYDQANLYFDYAIIGGYGGYVFKDNNGTLDPNN
Template Known Secondary structure  T
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   151........160.........170 .........180.........190.........200....
 
   182.......190.........200........ .210.........220.........230.........240
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Query Sequence  VGVDNAGAKAGLTFLVDLIKNKHMNAD. TDYSIAEAAFNKGETAMTINGPWAWSNIDTSK
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Template Sequence  IGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAK
Template Known Secondary structure  SSSTS
S

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GGGTT
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   205....210.........220.........230.........240.........250.........260....
 
   241........ 250.........260.........270.........280.........290.........
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Query Sequence  VNYGVTVLP. TFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKP
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Template Sequence  IDFGVTPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQ. ALTSAQAQQMYFRDSQ
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   265....270.........280.........290.........300....... ..310.........320...
 
   300.........310 .........320.........330.........340.........350........
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Query Sequence  LGAVALKSYEE. ELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTV
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Template Sequence  QIPALLSVQRSSAVQSSPTFKAFVEQLRYAVPMPNIPQMQAVWQAM. SILQNIIAGKVSP
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SSTST
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   324.....330.........340.........350.........360......... 370.........380..
 
   359360.........370
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Query Sequence  DAALAAAQTNAA
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Template Sequence  EQGAKDFVQNIQ
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   383......390....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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