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Job Description | multi-dom | Confidence | 61.95% | Date | Sun Sep 7 16:46:09 BST 2014 |
Rank | 196 | Aligned Residues | 103 |
% Identity | 11% | Template | c4mptA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:putative leu/ile/val-binding protein; |
PDBTitle: crystal structure of periplasmic binding protein type 1 from2 bordetella pertussis tohama i
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Resolution | 1.75 Å |
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458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | E | L | M | D | E | C | L | K | I | A | H | V | N | H | Q | K | V | F | L | L | G | A | T | N | E | . |
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V | V | E | A | A | Q | Y | A | L | Q | Q | R | Y | P | N | I | S | F | A | H | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | I | E | A | V | A | X | G | E | Y | L | A | K | K | F | K | R | V | G | I | I | H | E | S | T | A | Y | G | V | T | G | V | D | Y | L | A | A | S | I | A | K | N | G | G | A | K | P | V | A | T | D | S | Y | N | Q | G | A | Q | D | X |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
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513 | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | T | V | V | K | R | I | K | L | F | K | P | D | Y | I | F | V | G | M | G | F | P | K | Q | E | E | W | I | M | T | H | E | N | Q | F | E | S | T | V | M | M | G | V | G | G | S | L | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | A | Q | V | A | R | X | K | R | A | N | V | D | A | I | A | A | I | G | L | G | K | D | L | A | V | L | R | R | T | X | A | R | L | N | V | N | V | P | L | A | A | S | N | G | A | L | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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