Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence42.50%DateSun Sep 7 16:46:09 BST 2014
Rank256Aligned Residues195
% Identity13%Templatec4evsA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative abc transporter subunit, substrate-binding PDBTitle: crystal structure of abc transporter from r. palustris - solute2 binding protein (rpa0985) in complex with 4-hydroxybenzoate
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DAALAAAQTNAAAK. . . . . VDILGVDFDNTTMLQMVENIKTFFANQSTNNLFIVTANPEI
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Template Sequence  KXGIDAWVAEHGNKVGGHTVEFVYRDEVSPNPAQSKALAQELIVKEKVQYIAGLYFTPNA
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   45....50.........60.........70.........80.........90.........100....
 
   414.....420.........430.. .......440.........450.........460.........470..
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Query Sequence  VNYATTHQAYLELINQASY. IVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHVNH
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Template Sequence  . . . . . . . XAVAPLLQEAKVPXVVLNAATSSITEKSPYIVRTSFTXFQNTVPAAKVAKQKG
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   105....110.........120.........130.........140.........150.......
 
   473 ......480.........490...... ...500... ......510.........520.......
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Query Sequence  Q. KVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRIKLFKPDYI
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Template Sequence  AKKVAIAVSDYGPGIDAETAFKKTFEAEGGSVVEAVRXPLATTDFGPIXQRIKDSGADXI
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   158.160.........170.........180.........190.........200.........210.......
 
   528.530........ .540...... ...550.........560
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Query Sequence  FVGMGFPKQEE. WIMTHENQ. . . FESTVMMGVGGSLE
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Template Sequence  FTFLPAGPPTLGFVKAYIDNGLKAAGVKLXSTGDVVT
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   218.220.........230.........240.........250....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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