Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence29.31%DateSun Sep 7 16:46:09 BST 2014
Rank321Aligned Residues96
% Identity15%Templatec2gn0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   437..440.........450.........460.........470.........480.........490......
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  GTGVVKASHRLKQPLAHRIPGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQRY
Query Conservation 
  
             

 
 

   
             

            
    
Alig confidence 



















.






































Template Conservation 
 
 
  
   
    

 
.          
   

 
             
       
Template Sequence  AQGVSLSCAMLGIDGKVVMP. KGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETE
Template Known Secondary structure  T


.TTS
S


SS
Template Predicted Secondary structure 



.










Template SS confidence 



























































   87..90.........100...... ...110.........120.........130.........140.....
 
   497..500... ......510.........520.. .......530...
Predicted Secondary structure 


.








..





Query SS confidence 






.


















. .










Query Sequence  PNISFAH. HHGYIDLEDETVVKRIKLF. . KPDYIFVGMGF
Query Conservation 
      .  
            
   ..      
  
 
Alig confidence 






.


















..










Template Conservation 
        
     
  
   

  

   
 

   

Template Sequence  GRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGG
Template Known Secondary structure 



SSSS
TT


SS
Template Predicted Secondary structure 















Template SS confidence 







































   146...150.........160.........170.........180.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D