Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence65.86%DateSun Sep 7 16:46:09 BST 2014
Rank184Aligned Residues195
% Identity12%Templatec4nqrA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:amino acid/amide abc transporter substrate-binding protein, PDBTitle: the crystal structure of a solute-binding protein (n280d mutant) from2 anabaena variabilis atcc 29413 in complex with alanine
Resolution1.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   359360.........370.........380. ........390.........400.........410..
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Query Sequence  DAALAAAQTNAAAKVDILGVDFD. . . . . . NTTMLQMVENIKTFFANQSTNNLFIVTANPE
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Template Sequence  VAGAKIAEKYFNDKGGVNGTPIKLIFQDTAGDEAGTINAFQTLINKDKVVGIVGPTLSQQ
Template Known Secondary structure  TTTBTTB



TTSTS

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   75....80.........90.........100.........110.........120.........130....
 
   413......420.........430.. .......440.........450.........460.........470.
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Query Sequence  IVNYATTHQAYLELINQASY. IVADGTGVVKASHRLKQPLAHRIPGIELMDECLKIAHVN
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Template Sequence  A. . . . . . . FSANPIAERAKVPVVGPSNTAKGIPEIGDYVARVSAPVSVVAPNSVKAALKQ
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STTSGGG
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   135 ....140.........150.........160.........170.........180.......
 
   472. ......480. ........490.........500.........510.........520...
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Query Sequence  HQ. . . KVFLLGAT. . . . . NEVVEAAQYALQQRYPNISFAHHHGYIDLEDETVVKRIKLFK
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Template Sequence  NPNIKKVAVFFAQNDAFSKSETEIFQQTVKDQGLELVTVQKFQTTDTDFQSQATNAINLK
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   188.190.........200.........210.........220.........230.........240.......
 
   524.....530.........540.........550.........560
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Query Sequence  PDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  PDLVIISGLAADGGNLVRQLRELGYQGAIIGGDGLNT
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   248.250.........260.........270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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