Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence26.37%DateSun Sep 7 16:46:09 BST 2014
Rank344Aligned Residues126
% Identity13%Templatec3ix1B_
PDB info PDB header:biosynthetic proteinChain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10 .........20.........30.........40.........50.........60..
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Query Sequence  EEGKLVI. WINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  ETVEVMLDWYPNAVHTFLYVAIENGYFAEEGLDVDIVFPTNPTDPI. QLTASGAI. PLAL
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   31........40.........50.........60.........70...... ...80.... ....
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
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Template Sequence  SYQPDVILARSKD. . . . . . . . . . . . . . . . . . . . . . . . LPVVSVASVVRSPLNHVMFLAE.
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   8990.........100. ........110.........120...
 
   123......130.........140.........150.........160.......
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Query Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGG
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Template Sequence  . . QDFDSPADL. . . . . . . . . VGLTVGYPGIPVNEPILKTMVEAAG
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SSGGGG.........TTS
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   124.....130.. .......140.........150.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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