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Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank26Aligned Residues359
% Identity99%Templatec3waiA_
PDB info PDB header:transferase, transport proteinChain: A: PDB Molecule:maltose-binding periplasmic protein, transmembrane PDBTitle: crystal structure of the c-terminal globular domain of2 oligosaccharyltransferase (afaglb-l, o29867_arcfu) from archaeoglobus3 fulgidus as a mbp fusion
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDI
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Template Sequence  MKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDI
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   0.........10.........20.........30.........40.........50.........
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  IFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNK
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Template Sequence  IFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNK
Template Known Secondary structure  GGGTT
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   60.........70.........80.........90.........100.........110.........
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  DLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIK
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Template Sequence  DLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKDVG. . . . . .
Template Known Secondary structure  TT
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SBGGGTT




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   120.........130.........140.........150.........160.........170...
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  DVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK
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Template Sequence  . . . VDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK
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   183......190.........200.........210.........220.........230.........
 
   241........250.........260.........270.........280.........290.........300
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Query Sequence  VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPL
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Template Sequence  VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPL
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   240.........250.........260.........270.........280.........290.........
 
   301........310.........320.........330.........340.........350.........360
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Query Sequence  GAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDA
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Template Sequence  GAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDE
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   300.........310.........320.........330.........340.........350.........
 
   361.......
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Query Sequence  ALAAAQTN
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Template Sequence  ALKDAQTN
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   360.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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