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Job Descriptionmulti-dom
Confidence99.85%DateSun Sep 7 16:46:09 BST 2014
Rank105Aligned Residues284
% Identity15%Templatec3cg1A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:upf0100 protein pf0080; PDBTitle: crystal structure of p. furiosus periplasmic binding protein2 moda/wtpa with bound tungstate
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.. ....... 40.........50.........
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Query Sequence  EGKLVIWINGDKGYNGLAEVGKKFEKDT. . . . GIKVTVE. HPDKLEEKFPQVAATGDGPD
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Template Sequence  EVTLIVFHAG. SLSVPFQEVEKEFSEYAERNLGIKVSFQDEASGSVMAVRKVTDLGRKAD
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G.GGS


TS



S
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   32.......40. ........50.........60.........70.........80.........90
 
   60... ......70.........80.........90.........100.........110........
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Query Sequence  IIFW. AHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIY
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Template Sequence  VIGVADYTLIPQLLIPNYTDFYVLF. . ATNEIVIAFTDKSRYVEEMKSNPDKWYEILARE
Template Known Secondary structure  SSTTTTTTT
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TTSTT
GGGTST
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   91........100.........110..... ....120.........130.........140........
 
   119120.........130.........140.........150.........160.........170........
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Query Sequence  NKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYD
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Template Sequence  DVRFGFSDPNQDPCGYRSLMVIKLADLYYGKEIFKELIEE. NTNIYSNGTQIYAPKEITV
Template Known Secondary structure  T


TTT
TS
TTT.TBS
TT
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B
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   149150.........160.........170.........180........ .190.........200.......
 
   179180.........190.........200.........210.........220.........230........
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Query Sequence  IKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDT
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Template Sequence  NPGKIVIRPKETDLLGLVESG. . . . . . SIDYIFIYKSVAKQHNLSYITLPSEINLGDFSK
Template Known Secondary structure 
TTTSSGGGGT......SSSTT


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   208.210.........220........ .230.........240.........250.........260.
 
   239240.........250.........260.........270.........280.........290........
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Query Sequence  SKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK
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Template Sequence  EKFYGQISITLGSTGKTIKAKPIVYGVTVLKDAPNREVAIEFLR. YLLSENGKRIFEKNH
Template Known Secondary structure  TT
TTT






TT
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   262.......270.........280.........290.........300..... ....310.........320
 
   299
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Query Sequence  P
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Template Sequence  Q
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   321
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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