Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence98.27%DateSun Sep 7 16:46:09 BST 2014
Rank124Aligned Residues235
% Identity15%Templatec4n13A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:phosphate abc transporter, periplasmic phosphate-binding PDBTitle: crystal structure of psts (bb_0215) from borrelia burgdorferi
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. ........40.........50.........60...
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Query Sequence  EGKLVIWINGDKGYNGLAEVGKKFEKD. TGIKVTVEHPDKLEEKFPQVAATGDGPDIIFW
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Template Sequence  EKIVSIGG. STTVSPILDEMILRYDKINNNTKVTYDAQGS. . SVGINGLFNKIYKIAISS
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   7..10.... .....20.........30.........40..... ....50.........60...
 
   64.....70.........80.........90.........100.........110.........
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Query Sequence  AHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYN. . . .
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Template Sequence  RDLTKEEIEQG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKETVFAYDALIFITSPEIK
Template Known Secondary structure  S


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   64.....70.... .....80.........90....
 
   120.........130.........140.........150.........160.........170
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Query Sequence  . . . . . . . . . KDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAF
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Template Sequence  ITNITEENLAKILNGEIQNWKQVG. . . . . . GPDAKINFINRDSSSGSYSSIKDLLLNKIF
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BGGGGT......S
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   95....100.........110........ .120.........130.........140........
 
   171........180.........190.........200.........210.........220.........230
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Query Sequence  KYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGP
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Template Sequence  KTHEEAQFRQDGIVV. . . . . . . . . . . . . . . . . . . . . . . KSNGEVIEKTSLTPHSIGYIGL
Template Known Secondary structure  SSTTTSS

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   149150.........160... ......170.........180.....
 
   231........240... ......250.........260.........270.........280......
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Query Sequence  WAWSNIDTSKVNY. . . . GVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLL
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Template Sequence  GYAKNSIEKGLNILSVNSTYPTKETINSNKYTIKRNLIIV. . . TNYEDKSVTQFID. FMT
Template Known Secondary structure  GGTT

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   186...190.........200.........210.........220..... ....230........ .240.
 
   287..290.........300....
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Query Sequence  TDEGLEAVNKDKPLGAVA
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Template Sequence  SSTGQDIVEEQGFLGIKT
Template Known Secondary structure  STT
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   244.....250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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