 |
Job Description | multi-dom | Confidence | 49.79% | Date | Sun Sep 7 16:46:09 BST 2014 |
Rank | 235 | Aligned Residues | 94 |
% Identity | 14% | Template | c3l6cA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:serine racemase; |
PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor
|
Resolution | 2.20 Å |
|
 |
  |   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | G | V | V | K | A | S | H | R | L | K | Q | P | L | A | H | R | I | P | G | I | E | L | M | D | E | C | L | K | I | A | H | V | N | H | Q | K | V | F | L | L | G | A | T | N | E | V | V | E | A | A | Q | Y | A | L | Q | Q | R | Y |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
G | Q | A | L | T | Y | A | A | K | L | E | G | I | P | A | Y | I | V | V | P | Q | T | . |
A | P | N | C | K | K | L | A | I | Q | A | Y | G | A | S | I | V | Y | S | E | P | S | D | E | S | R | E | N | V | A | Q | R | I | I | Q | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | T | T | . | S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
497 | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | I | S | F | A | H | H | H | G | Y | I | D | L | E | D | . |
. |
. |
. |
. |
E | T | V | V | K | R | I | K | L | F | K | P | D | Y | I | F | V | G | M | G | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   | . | . |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
E | G | I | L | V | H | P | N | Q | E | P | A | V | I | A | G | Q | G | T | I | A | L | E | V | L | N | Q | V | P | L | . |
. |
V | D | A | L | V | V | P | V | G | G |
Template Known Secondary structure |   |
T |
|  |  |
|
| S | S | S | S |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |
| T | T | . | . |
|
|  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
|
. | . | . | 180 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|