Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence44.42%DateSun Sep 7 16:46:09 BST 2014
Rank252Aligned Residues168
% Identity18%Templatec3thaB_
PDB info PDB header:lyaseChain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni.
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370...... ...380 .........390.
Predicted Secondary structure 










..



...................



Query SS confidence 























. .



. . . . . . . . . . . . . . . . . . .










Query Sequence  SGRQTVDAALAAAQTNAAAKVDIL. . GVDF. . . . . . . . . . . . . . . . . . . DNTTMLQMVEN
Query Conservation   
  
 



  

  
 
 
 

..
   ...................
  
       
Alig confidence 























..



...................










Template Conservation   
 

          
   
 
 



 




 





  
   

  
         
Template Sequence  LGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFEL
Template Known Secondary structure  TTSS
TGGGSS
S

SS



SS
TT

Template Predicted Secondary structure 






















Template SS confidence 



























































   1920.........30.........40.........50.........60.........70........
 
   392.......400.........410.........420.........430.. ..... ..440...
Predicted Secondary structure 











...

.....
Query SS confidence 








































. . .




. . . . .





Query Sequence  IKTFFANQSTNNLFIVTANPEIVNYATTHQAYLELINQASY. . . IVADG. . . . . TGVVKA
Query Conservation                
   
                   
  ...   

.....  
   
Alig confidence 


..




















...











...




.....





Template Conservation 
  ..
    

    
 
 
   
 ...
 
      

 








 

       
Template Sequence  LAR. . IKTKKALVFXVYYNLIFSYGL. . . EKFVKKAKSLGICALIVPELSFEESDDLIKE
Template Known Secondary structure  T..


SS


...TT
TT

GGG
Template Predicted Secondary structure  ..








...







Template SS confidence 



























































   7980. ........90.........100.. .......110.........120.........130...
 
   444.....450.........460.........470........ .480. ........490....
Predicted Secondary structure 













......


...
Query SS confidence 


































. . . . . .


. . .












Query Sequence  SHRLKQPLAHRIPGIELMDECLKIAHVNHQKVFLL. . . . . . GAT. . . NEVVEAAQYALQQ
Query Conservation            

 
 

   
             
......
  ...          
  
Alig confidence 


































......


...












Template Conservation      

  
  
 
 
   

  
   
  


     
 

        
   
  

 
Template Sequence  CERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRS
Template Known Secondary structure  T


TTS
TT

S


S
SS

T
Template Predicted Secondary structure 






















Template SS confidence 



























































   134.....140.........150.........160.........170.........180.........190...
 
   495....500.........510.........520.........530
Predicted Secondary structure 















Query SS confidence 



































Query Sequence  RYPNISFAHHHGYIDLEDETVVKRIKLFKPDYIFVG
Query Conservation    
        
            
         
 
Alig confidence 








....













.







Template Conservation      

 

....


 
 
    
  .







Template Sequence  FTNLPIFVG. . . . FGIQNNQDVKRXRK. VADGVIVG
Template Known Secondary structure  T

S
....SS

SSTT.TSS
Template Predicted Secondary structure 




....





.


Template SS confidence 



































   194.....200.. .......210...... ...220....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D