Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence92.08%DateSun Sep 7 16:46:09 BST 2014
Rank132Aligned Residues195
% Identity13%Templatec3sg0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.. .......380.........390.........400.........410......
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Query Sequence  VDAALAAAQTNAAAK. VDILGVDFDNTTMLQMVENIKTFFANQSTNNLFIVTANPEIVNY
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Template Sequence  QSKTVAALPKEIGGEKVTYFALD. DESDPTKAAQNARKLLSEEKVD. . VLIGSSLTPVSL
Template Known Secondary structure  GGGS
STT.
TT
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   44.....50.........60...... ...70.........80........ .90.........100
 
   417..420.........430. ........440.........450.........460. ........470..
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Query Sequence  ATTHQAYLELINQAS. . YIVADGTGVVKASHRLKQPLAHRIPGIELM. . DECLKIAHVNH
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Template Sequence  P. . . . . LIDIAAEAKTPLXTXAAAAILVAPXDERRKWVYKVVPNDDIXAEAIGKYIAKTG
Template Known Secondary structure  .....TT





GGGT
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TTGGG
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   101 ........110.........120.........130.........140.........150.....
 
   473 ......480.........490...... ...500... ......510.........520.......
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Query Sequence  Q. KVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLEDETVVKRIKLFKPDYI
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Template Sequence  AKKVGYIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSDASVTGQVLKIIATKPDAV
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SST




TT
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   156...160.........170.........180.........190.........200.........210.....
 
   528.530.........540.........550.........560
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Query Sequence  FVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  FIASAGTPAVLPQKALRERGFKGAIYQTHGVAT
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SGGGTT

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   216...220.........230.........240........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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