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Job Descriptionmulti-dom
Confidence99.97%DateSun Sep 7 16:46:09 BST 2014
Rank96Aligned Residues273
% Identity16%Templatec2vozA_
PDB info PDB header:metal-binding proteinChain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHD
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Template Sequence  TINLYSSRHY. . NTDDALYDAFGEVNLIEA. . . SAEELIERIQSEGANSPGDILFTVDAG
Template Known Secondary structure  S


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TGGG


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   35....40.... .....50.........60.. .......70.........80.........
 
   67..70.........80.........90.........100.........110.........120......
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Query Sequence  RFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP
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Template Sequence  MLWRAEQAGLFQPVRS. . . . . . GKLNERIPENLRHPDGLWYGFTQRARVLYYSRDRVNPA
Template Known Secondary structure  TT
B




......S
GGGB
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GG
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   90.........100..... ....110.........120.........130.........140...
 
   127..130.........140.........150.........160.........170.........180.....
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Query Sequence  . PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVD
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Template Sequence  DLSTYEAL. . . . . . ADPQWRGKILVRPSSNVYNLSLTASR. . . . . . . . . . . . . . . . . . IA
Template Known Secondary structure  G


SGGG......GSGGGTTT


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   144.....150. ........160.........170....... ..
 
   186...190.........200.........210.........220.........230.........240..
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Query Sequence  NAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN. . .
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Template Sequence  IHGEPETRRWLQGLVGNFARQPEGNDTAQIRAIAAGIGDVAIANSYYYIRLQKSTDPADQ
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S
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   180.........190.........200.........210.........220.........230.........
 
   243......250.........260.........270.........280.........290........
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Query Sequence  . . . . YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK
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Template Sequence  EVVEKVSLFFPNTGSGERGTHVNVSGAGVLKNAPNRDAAIAFLE. YLASDDAQRYFAEGN
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S
STTS

B
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   240.........250.........260.........270.........280... ......290........
 
   299300.........310.....
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Query Sequence  PLGAVALKSYEEELAKD
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Template Sequence  NEYPVIPGVPIDPVLAA
Template Known Secondary structure  T
SSTTS


T
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   299300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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