Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence36.98%DateSun Sep 7 16:46:09 BST 2014
Rank289Aligned Residues133
% Identity11%Templatec2uvaI_
PDB info PDB header:transferaseChain: I: PDB Molecule:fatty acid synthase beta subunits; PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the beta subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   377..380.........390.........400.........410.........420.........430......
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  GVDFDNTTMLQMVENIKTFFANQSTNNLFIVTANPEIVNYATTHQAYLELINQASYIVAD
Query Conservation 
   
  
                     
   
                   
     
Alig confidence 







































....................
Template Conservation 

         

  
   
 





 
 

  
    
....................
Template Sequence  GGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGW. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GG

SGGGS
TT

TT
TT....................
Template Predicted Secondary structure 











....................
Template SS confidence 



























































   633......640.........650.........660.........670..
 
   437..440.........450..... ....460.........470.........480.........490....
Predicted Secondary structure 








..








Query SS confidence 


















. .






































Query Sequence  GTGVVKASHRLKQPLAHRI. . PGIELMDECLKIAHVNHQKVFLLGATNEVVEAAQYALQQ
Query Conservation 
  
             

.. 
 

   
             

            
  
Alig confidence 


















..






































Template Conservation 

 

 


  
 












 


 


  


 








 

  

 

 
Template Sequence  QIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKPGSVDAIQQVINIAK
Template Known Secondary structure  TTT

SS


S

S


S
Template Predicted Secondary structure 



















Template SS confidence 



























































   673......680.........690.........700.........710.........720.........730..
 
   495....500.. .......510... ......520.........530
Predicted Secondary structure 


.........








..



Query SS confidence 







. . . . . . . . .










. .
















Query Sequence  RYPNISFA. . . . . . . . . HHHGYIDLEDE. . TVVKRIKLFKPDYIFVG
Query Conservation    
     .........   
       ..     
         
 
Alig confidence 







.........










..







.







Template Conservation 
 
 
















 



 


 


 

 .  





Template Sequence  ANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRK. CSNIVLVA
Template Known Secondary structure 
TTS


TT
SSS

S

ST.STT
Template Predicted Secondary structure 

















.


Template SS confidence 














































   733......740.........750.........760.........770 ........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D