Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence27.23%DateSun Sep 7 16:46:09 BST 2014
Rank338Aligned Residues131
% Identity13%Templatec4ne4A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc transporter, substrate binding protein PDBTitle: crystal structure of abc transporter substrate binding protein prox2 from agrobacterium tumefaciens cocrystalized with btb
Resolution1.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAH
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Template Sequence  AQVVVSSKIDTEGGVLGNIILAVLNQNKIETTDRIQLGATPVVRKAITAGEI. DIYPEYT
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SSTT

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   6...10.........20.........30.........40.........50....... ..60....
 
   66...70.........80.........90.........100.........110. ........120....
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Query Sequence  DRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAV. EALSLIYNKDLLP
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Template Sequence  GNAAFFFSKADDPLWKDAAKGYEEAKTLDYDA. . . NKIVWLAPSPANNTWAIALRKDVAD
Template Known Secondary structure  GGTT
TT
GGGGS...




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   65....70.........80.........90...... ...100.........110.........120.
 
   125 ....130.........140
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Query Sequence  N. PPKTWEEIPALDKEL
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Template Sequence  KNNLKTLSDFGKYVAGG
Template Known Secondary structure  T

BTT
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   122.......130........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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