 |
Job Description | multi-dom | Confidence | 23.00% | Date | Sun Sep 7 16:46:09 BST 2014 |
Rank | 369 | Aligned Residues | 91 |
% Identity | 16% | Template | c3iauA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:threonine deaminase; |
PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum
|
Resolution | 2.35 Å |
|
 |
  |   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | G | V | V | K | A | S | H | R | L | K | Q | P | L | A | H | R | I | P | G | I | E | L | M | D | E | C | L | K | I | A | H | V | N | H | Q | K | V | F | L | L | G | A | T | N | E | V | V | E | A | A | Q | Y | A | L | Q | Q | R | Y |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
|
|   |
|   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
A | Q | G | V | A | L | A | G | Q | R | L | N | C | V | A | K | I | V | M | P | T | . |
T | T | P | Q | I | K | I | D | A | V | R | A | L | G | G | D | V | V | L | Y | G | K | T | F | D | E | A | Q | T | H | A | L | E | L | S | E | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| T | . | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
497 | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | I | S | F | A | H | H | H | G | Y | I | D | L | E | D | . |
. |
. |
. |
. |
. |
. |
. |
E | T | V | V | K | R | I | K | L | F | K | P | D | Y | I | F | V | G | M | G | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   | . | . |   |   |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
G | L | K | . |
. |
. |
Y | I | P | P | F | D | D | P | G | V | I | K | G | Q | G | T | I | G | T | E | I | N | R | Q | L | . |
. |
K | D | I | H | A | V | F | I | P | V | G | G |
Template Known Secondary structure |   |
T |
|  | . | . | . |  |
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
| S |  |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|  | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | |
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
. | . | . | 210 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|