Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank43Aligned Residues367
% Identity28%Templatec4hs7A_
PDB info PDB header:solute-binding proteinChain: A: PDB Molecule:bacterial extracellular solute-binding protein, putative; PDBTitle: 2.6 angstrom structure of the extracellular solute-binding protein2 from staphylococcus aureus in complex with peg.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30......... 40.........50.........
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Query Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVE. . HPDKLEEKFPQVAATGDGPD
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Template Sequence  KDKPNQLTMWVDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPD
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   40.........50.........60.........70.........80.........90.........
 
   60.........70.........80.........90.........100.........110.........
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Query Sequence  IIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYN
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Template Sequence  IFFLAHDNTGSAYLQGLAAEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYN
Template Known Secondary structure  GGGTT





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   100.........110.........120.........130.........140.........150.........
 
   120.........130.........140.... .....150.........160.........170.......
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Query Sequence  KDLLPNPPKTWEEIPALDKELKAKG. . KSALMFNLQEPYFTWPLIAADGGYAFKYENGKY
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Template Sequence  KKLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEY
Template Known Secondary structure  TTT

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   160.........170.........180.........190.........200.........210.........
 
   178.180.........190.........200.........210.........220.........230.......
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Query Sequence  DIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNID
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Template Sequence  DIHQLGLNSKHVVKNAERLQKWYDKGYLPKAATHDVMIGLFKEGKVGQFVTGPWNINEYQ
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   220.........230.........240.........250.........260.........270.........
 
   238. 240.........250.........260.........270.........280.........290......
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Query Sequence  TS. KVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNK
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Template Sequence  ETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAKDLML. YITSKDTLQKYTD
Template Known Secondary structure  GGG


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   280.........290.........300.........310.........320..... ....330........
 
   297..300.........310.........320.........330.........340.........350......
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Query Sequence  DKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQ
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Template Sequence  EMSEITGRVDVKSS. . . . NPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNGK.
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BSBTT


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SGGGGGTTT
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   339340.........350.. .......360.........370.........380.........390...
 
   357..360.........370....
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Query Sequence  TVDAALAAAQTNAAAKVD
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Template Sequence  NPKQALDEATNDITQNIK
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   394.....400.........410.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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