Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank75Aligned Residues337
% Identity11%Templatec4hcwC_
PDB info PDB header:transferaseChain: C: PDB Molecule:thiaminase-i; PDBTitle: structure of a eukaryotic thiaminase-i
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10 .........20.........30 .........40.........50.......
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Query Sequence  KLVI. . . . . . . . WINGDKGYNGLAEVGKKFEK. DTGIKVTVEHPDKLEEKFPQVAATGDG
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Template Sequence  TLTVGLFPYLPSWNENGNEVKLINLIKDVLPTQVSGYNIEYTEFDCY. . . . . SDASLQSL
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   7..10.........20.........30.........40.........50... ......60.
 
   58.60.........70.........80.. .......90.........100.........110.....
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Query Sequence  PDIIFWAHDRFGGYAQSGLLAEITP. . DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALS
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Template Sequence  PDVFSTDSIFLPYLVSLGGVKSLDESLVRGVTGDLHSFVSSSASVNGSVYGFPQYLCSNF
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SGGGTS
B

B

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TTTT



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   62.......70.........80.........90.........100.........110.........120.
 
   116...120.........130.........140.........150.........160.........170.....
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Query Sequence  LIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENG
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Template Sequence  LLSSPNATQQASSLLELAQKVGYEQIVYPDVASSSSFTVFGLYQQLLQSSSSAAVDIKA.
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TT
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SB
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   122.......130.........140.........150.........160.........170.........180
 
   176...180.........190.........200.........210.........220.........230.....
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Query Sequence  KYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSN
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Template Sequence  . . . . SDLPQSGDQVNKDITQKYRTILDSTVVASQREYINSVKQGKPISNYYVGYSESMCE
Template Known Secondary structure  ....GGS

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   181........190.........200.........210.........220.........230......
 
   236...240.........250.........260.........270.........280.........290.....
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Query Sequence  IDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVN
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Template Sequence  IKDIIRDQQYNVQLIGTSDKPYVYTDVLALNSNLCDEKQKVAVEVIK. NLLTNTLVLDLL
Template Known Secondary structure  GTT


BSSSS
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   237..240.........250.........260.........270.........280... ......290.....
 
   296...300.........310.........320.........330.........340.........350....
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Query Sequence  KDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG
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Template Sequence  GLGLTLPANKNGIAHLAKSSNFYAQLSQQFDAKESEVRVLRCVDFANKEVKNCAGVLRP
Template Known Secondary structure  TT
SSTS
STTT
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GG
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   296...300.........310.........320.........330.........340.........350....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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