Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence70.28%DateSun Sep 7 16:46:09 BST 2014
Rank169Aligned Residues103
% Identity7%Templatec3h5lB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:putative branched-chain amino acid abc PDBTitle: crystal structure of a putative branched-chain amino acid2 abc transporter from silicibacter pomeroyi
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   458.460........ .470.........480.........490...... ...500... ......510.
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Query Sequence  IELMDECLKIA. . HVNHQKVFLLGATNEVVEAAQYALQQRY. . PNISFAH. . HHGYIDLE
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Template Sequence  LKFLKDIEDNGEFSRPNNKIAIITGPGIYSVNIANAIRDGAGEYGYDVSLFETVAIPVSD
Template Known Secondary structure  TTS


SSS
SSGGGGT


SS
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   176...180.........190.........200.........210.........220.........230.....
 
   512.......520.........530.........540.........550.........560
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Query Sequence  DETVVKRIKLFKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLE
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Template Sequence  WGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQYGAS
Template Known Secondary structure 
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SGGG
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   236...240.........250.........260.........270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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