Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence21.91%DateSun Sep 7 16:46:09 BST 2014
Rank382Aligned Residues97
% Identity21%Templatec4dpkB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malonyl-coa/succinyl-coa reductase; PDBTitle: structure of malonyl-coenzyme a reductase from crenarchaeota
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   471........480.........490.........500... ......510.....
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Query Sequence  NHQKVFLLGATNEVVEAAQYALQQRYPNISFAH. . HHGYIDLEDETV. . . . . . . . . . . . .
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Template Sequence  RTLKAAILGATGLVGIEYVRMLS. NHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEI
Template Known Secondary structure 

TTTTSTTT.S
SSSTTTTSB



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TTT
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   6...10.........20........ .30.........40.........50.........60....
 
   516...520.........530.........540.........550.........560........
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Query Sequence  . . . . . . . VKRIKLFKPDYIFVGMGFPKQEEWIMTHENQFESTVMMGVGGSLEVFAGAKKR
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Template Sequence  ADMEIKPTDPKLMDDVDIIFSPLPQGAAGPVEEQFAKE. . GFPVISNSPDHRFDPDVPLL
Template Known Secondary structure  TT
B


TTS
TT




TTTTT..T

SSTTTT
TTS
B
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   65....70.........80.........90.........100.. .......110.........120..
 
   569570
Predicted Secondary structure 

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Query Sequence  AP
Query Conservation 

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Template Conservation   
Template Sequence  VP
Template Known Secondary structure 
T
Template Predicted Secondary structure 

Template SS confidence 

   123.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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