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Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank9Aligned Residues373
% Identity98%Templatec3py7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:maltose-binding periplasmic protein,paxillin ld1,protein e6 PDBTitle: crystal structure of full-length bovine papillomavirus oncoprotein e62 in complex with ld1 motif of paxillin at 2.3a resolution
Resolution2.29 Å
Model Dimensions (Å)X:56.165 Y:67.322 Z:37.858

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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   3......10.........20.........30.........40.........50.........60..
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
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Template Sequence  WAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
Template Known Secondary structure  GGGTT
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   63......70.........80.........90.........100.........110.........120..
 
   123......130.........140.........150.........160.........170.........180..
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Query Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
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Template Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
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SBGGGTTT




SSTT
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   123......130.........140.........150.........160.........170.........180..
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
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Template Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVN
Template Known Secondary structure  SSSTTSS
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   183......190.........200.........210.........220.........230.........240..
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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Template Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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   243......250.........260.........270.........280.........290.........300..
 
   303......310.........320.........330.........340.........350.........360..
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Query Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
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Template Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
Template Known Secondary structure  SBTTSTS


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   303......310.........320.........330.........340.........350.........360..
 
   363......370.....
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Query Sequence  AAAQTNAAAKVDI
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Template Sequence  AAAQTNAAAMDDL
Template Known Secondary structure 
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   363......370.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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