Return to main results Retrieve Phyre Job Id

Job Descriptionmulti-dom
Confidence47.43%DateSun Sep 7 16:46:09 BST 2014
Rank242Aligned Residues141
% Identity18%Templatec2pjuD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910........ .20.........30.........40.........50.........60.......
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Query Sequence  VIWINGDKGY. NGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDR
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Template Sequence  VIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERC. DAI. IAAGS
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   13......20.........30.........40.........50.........60.. ... ....70
 
   68.70.........80.........90.........100.........110.........120....
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Query Sequence  FGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP. . .
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Template Sequence  NGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL
Template Known Secondary structure  TT
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   71........80.........90.........100.........110.........120.........130
 
   125....130.........140.........150.
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Query Sequence  . . NPPKTWEEIPALDKELKAKGKSALMFN
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Template Sequence  DQRSYITEEDARGQINELKANGTEAVVGA
Template Known Secondary structure  SSTT

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   131........140.........150.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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