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Job Descriptionmulti-dom
Confidence100.00%DateSun Sep 7 16:46:09 BST 2014
Rank29Aligned Residues372
% Identity98%Templatec4my2A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:maltose-binding periplasmic protein, norrin fusion protein; PDBTitle: crystal structure of norrin in fusion with maltose binding protein
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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Template Sequence  IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIF
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TT

TTS




TTTTT
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S
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   4.....10.........20.........30.........40.........50.........60...
 
   63......70.........80.........90.........100.........110.........120..
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Query Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
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Template Sequence  WAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDL
Template Known Secondary structure  GGGTT
B





TTB
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   64.....70.........80.........90.........100.........110.........120...
 
   123......130.........140.........150.........160.........170.........180..
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Query Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
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Template Sequence  LPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDV
Template Known Secondary structure 
SS

SBSTTSTTT


TTSTT
TT
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   124.....130.........140.........150.........160.........170.........180...
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
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Template Sequence  GVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
Template Known Secondary structure  SSSTTSS
TT

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   184.....190.........200.........210.........220.........230.........240...
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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Template Sequence  YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
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BBTTB



BTT
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S
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   244.....250.........260.........270.........280.........290.........300...
 
   303......310.........320.........330.........340.........350.........360..
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Query Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
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Template Sequence  VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEAL
Template Known Secondary structure  SBTS
S



TTSSSS
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   304.....310.........320.........330.........340.........350.........360...
 
   363......370....
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Query Sequence  AAAQTNAAAKVD
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Template Sequence  KDAQTNAAAEFI
Template Known Secondary structure  TTS


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   364.....370.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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