Job Description Dangers_of_Intensive Confidence 95.90% Date Sun Sep 7 17:29:03 BST 2014 Rank 29 Aligned Residues 33 % Identity 64% Template d1yymg1 SCOP info gp120 core gp120 core gp120 core Resolution 2.20

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	A	A	V	Q	L	N	T	S	V	Q	I	N	C	T	R	P	N	Y	N	K	R	K	R	I	H	I	G	R	G	P	G	R	A	F	Y	T	T	G	K	I	G	N	M	R	Q	A	H	C	N	I	S	R	A	K	W	N	N
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	T	I	I	V	Q	L	N	E	S	V	V	I	N	C	T	G	A	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	L	S	K	T	Q	W	E	N
Template Known Secondary structure		T	S																T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																														.	.	.	.	.	.	.	.	310	.
		286	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D