Job Description Dangers_of_Intensive Confidence 99.83% Date Sun Sep 7 17:29:03 BST 2014 Rank 13 Aligned Residues 91 % Identity 19% Template c4eycA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:cathelicidin antimicrobial peptide; PDBTitle: crystal structure of the cathelin-like domain of human cathelicidin2 ll-37 (hcld) Resolution 1.90 Å Model Dimensions (Å) X:38.678 Y:41.147 Z:29.048

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		V	R	R	A	L	D	F	A	V	S	E	Y	N	K	A	S	N	D	M	Y	H	S	R	A	L	Q	V	V	R	A	R	K	Q	I	V	A	G	V	N	Y	F	L	D	V	E	L	G	R	T	T	C	T	K	T	Q	P	.	N	L	D
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		Y	K	E	A	V	L	R	A	I	D	G	I	N	Q	R	S	S	D	A	N	L	Y	R	L	L	D	L	D	P	R	T	M	D	G	D	P	D	T	P	K	P	V	S	F	T	V	K	E	T	V	C	P	R	T	T	Q	Q	S	P	E
Template Known Secondary structure																				S															S		T	T	S															T	T			S		G	G
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	P	F	H	E	Q	P	H	L	K	R	K	A	F	C	S	F	Q	I	Y	T	V	P	W	Q	G	T	M	T	L	S	K	S	T	C	Q	D
Query Conservation
Alig confidence														.	.	.																	.	.	.
Template Conservation														.	.	.																	.	.	.
Template Sequence		D	C	D	F	K	K	D	G	L	V	K	R	.	.	.	C	M	G	T	V	T	L	N	Q	A	R	G	S	F	D	I	.	.	.	S	C	D	K
Template Known Secondary structure		G	S		B		T	T						.	.	.							S	B	T	T	S	S					.	.	.				T
Template Predicted Secondary structure														.	.	.																	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D