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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Sep 12

Fold library idPDB HeaderMoleculeTitle
c3jadC_ signaling protein/antagonist Chain: C: glycine receptor subunit alphaz1; structure of alpha-1 glycine receptor by single particle electron2 cryo-microscopy, strychnine-bound state
c4zexA_ unknown function Chain: A: pfhad1; crystal structure of pfhad1 in complex with glyceraldehyde-3-phosphate
c5camC_ transcription Chain: C: pupr protein; crystal structure of the cytoplasmic domain of the pseudomonas putida2 anti-sigma factor pupr (semet)
c5cqcA_ hydrolase Chain: A: putative ravz protein; crystal structure of the legionella pneumophila effector protein ravz
c5ck4B_ signaling protein Chain: B: putative signal recognition particle protein; signal recognition particle receptor srb-gdp from chaetomium2 thermophilum
c4zbzA_ hydrolase Chain: A: uracil-dna glycosylase; family 4 uracil-dna glycosylase from sulfolobus tokodaii (free form,2 x-ray wavelength=1.5418)
c5cpcA_ cell invasion Chain: A: secreted effector protein sopd; crystal structure of sopd, a type iii secreted virulence effector from2 salmonella enterica
c5a5tM_ hydrolase Chain: M: eukaryotic translation initiation factor 3 subunit m; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c5awqA_ hydrolase Chain: A: isomaltodextranase; arthrobacter globiformis t6 isomaltodextranse complexed with panose
c5ck3E_ signaling protein Chain: E: srx domain; signal recognition particle receptor srb-gtp/srx complex from2 chaetomium thermophilum
c5a5tC_ hydrolase Chain: C: eukaryotic translation initiation factor 3 subunit c; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c5cq9A_ cell invasion Chain: A: secreted effector protein sopd2; crystal structure of sopd2, a type iii secreted virulence effector2 from salmonella enterica
c5a2zB_ unknown function Chain: B: mitochondrial protein; crystal structure of mtpap in complex with gtp
c2n01B_ protein transport/protein transport Chain: B: virb9 protein; nmr structure of virb9 c-terminal domain in complex with virb7 n-2 terminal domain from xanthomonas citri's t4ss
c4ue4B_ translation Chain: B: ftsq signal sequence; structural basis for targeting and elongation arrest of2 bacillus signal recognition particle
c5a5tE_ hydrolase Chain: E: eukaryotic translation initiation factor 3 subunit e; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c5ck3F_ signaling protein Chain: F: putative signal recognition particle protein; signal recognition particle receptor srb-gtp/srx complex from2 chaetomium thermophilum
c4r9iA_ hydrolase inhibitor Chain: A: serpin-18; crystal structure of cysteine proteinase inhibitor serpin18 from2 bombyx mori
c5a5tF_ hydrolase Chain: F: eukaryotic translation initiation factor 3 subunit f; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c5a9iB_ transport protein Chain: B: solute carrier family 15 member 2; crystal structure of the extracellular domain of pept2
c5ck3D_ signaling protein Chain: D: putative signal recognition particle protein; signal recognition particle receptor srb-gtp/srx complex from2 chaetomium thermophilum
c2rvbA_ dna binding protein/transcription Chain: A: dna repair protein complementing xp-c cells; solution structure of the complex between xpc acidic domain and tfiih2 p62 ph domain
c5a5tH_ hydrolase Chain: H: eukaryotic translation initiation factor 3 subunit h; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c4wd3B_ ligase Chain: B: l-amino acid ligase; crystal structure of an l-amino acid ligase riza
c4ro5A_ transferase Chain: A: sat domain from cazm; crystal structure of the sat domain from the non-reducing fungal2 polyketide synthase cazm
c4wpgA_ oxidoreductase Chain: A: dtdp-4-dehydrorhamnose reductase; group a streptococcus gaca is an essential dtdp-4-dehydrorhamnose2 reductase (rmld)
c5d1iB_ unknown function Chain: B: cyclic nucleotide-binding protein; structure of cyclic nucleotide-binding-like protein from brucella2 abortus bv. 1 str. 9-941
c5a5uB_ translation Chain: B: eukaryotic translation initiation factor 3 subunit b; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c4z4pA_ transferase Chain: A: histone-lysine n-methyltransferase 2d; structure of the mll4 set domain
c4uaqA_ protein transport Chain: A: protein translocase subunit seca 2; crystal structure of the accessory translocation atpase, seca2, from2 mycobacterium tuberculosis
c4zbpC_ hydrolase Chain: C: nudix hydrolase 7; crystal structure of the ampcpr-bound atnudt7
c5a9dB_ transport protein Chain: B: solute carrier family 15 member 1; crystal structure of the extracellular domain of pept1
c5da0A_ transport protein Chain: A: sulphate transporter; structure of the the slc26 transporter slc26dg in complex with a2 nanobody
c4ue4C_ translation Chain: C: signal recognition particle protein; structural basis for targeting and elongation arrest of2 bacillus signal recognition particle
c5a5tA_ hydrolase Chain: A: eukaryotic translation initiation factor 3 subunit a; structure of mammalian eif3 in the context of the 43s2 preinitiation complex
c4xw3B_ hydrolase Chain: B: atp-dependent rna helicase ddx1; crystal structure of the spry domain of the human dead-box protein2 ddx1
c4w8hA_ signaling protein Chain: A: toll-receptor-related 2; crystal structure of the tir domain of the toll-related receptor trr-22 from the lower metazoan hydra magnipapillata (crystal form ii)
c4wqmA_ oxidoreductase Chain: A: toluene-4-monooxygenase electron transfer component; structure of the toluene 4-monooxygenase nadh oxidoreductase t4mof,2 k270s k271s variant
c5a5tL_ hydrolase Chain: L: uncharacterized protein; structure of mammalian eif3 in the context of the 43s2 preinitiation complex


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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