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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jul 04

Fold library idPDB HeaderMoleculeTitle
c4xizM_ lipid transport/oxidoreductase Chain: M: mitochondrial distribution and morphology protein 35; structure of a phospholipid trafficking complex with substrate
c4zfjB_ hydrolase Chain: B: amidohydrolase egtc; ergothioneine-biosynthetic ntn hydrolase egtc, apo form
c4yhaF_ lyase Chain: F: alpha-carbonic anhydrase; crystal structure of the complex of helicobacter pylori -alpha2 carbonic anhydrase with methazolamide
c4yqxA_ cytokine/immune system Chain: A: interleukin-2; mouse il-2 bound to jes6-1 scfv fragment
c4w64C_ unknown function Chain: C: type vi secretion system effector, hcp1 family; hcp1 protein from acinetobacter baumannii ab0057
c4uqfB_ hydrolase Chain: B: gtp cyclohydrolase 1; crystal structure of listeria monocytogenes gtp cyclohydrolase i
c4xa1D_ motor protein Chain: D: gp7-myh7(1173-1238)-eb1 chimera protein; crystal structure of the coiled-coil surrounding skip 1 of myh7
c4z1yA_ lyase Chain: A: enolase; thermostable enolase from chloroflexus aurantiacus with substrate 2-2 phosphoglycerate
c4uphA_ hydrolase Chain: A: sulfatase (sulfuric ester hydrolase) protein; crystal structure of phosphonate monoester hydrolase of2 agrobacterium radiobacter
c4uz0B_ apoptosis Chain: B: nucleolar protein 3; crystal structure of apoptosis repressor with card (arc)
c4zdiE_ ligase Chain: E: ctp synthase; crystal structure of the m. tuberculosis ctp synthase pyrg (apo form)
c4upkC_ hydrolase Chain: C: phosphonate monoester hydrolase; phosphonate monoester hydrolase sppmh from silicibacter2 pomeroyi
c4uplC_ hydrolase Chain: C: sulfatase family protein; dimeric sulfatase spas2 from silicibacter pomeroyi
c4z0tA_ oxidoreductase Chain: A: oxidoreductase, short-chain dehydrogenase/reductase family; crystal structure of a putative oxoacyl-(acyl carrier protein)2 reductase from brucella ovis
c4yt2A_ metal binding protein Chain: A: h(2)-forming methylenetetrahydromethanopterin hmd ii from methanocaldococcus jannaschii
c5bpbB_ signaling protein Chain: B: frizzled-4; crystal structure of the cysteine-rich domain of human frizzled 4 -2 crystal form i
c4zbwA_ hydrolase Chain: A: caspase-8; crystal structure of death effector domain of caspase8 in homo sapiens
c5c4iA_ oxidoreductase Chain: A: oxalate oxidoreductase subunit alpha; structure of an oxalate oxidoreductase
c4xhrB_ lipid transport/oxidoreductase Chain: B: protein ups1, mitochondrial; structure of a phospholipid trafficking complex, native
c4wmyB_ sugar binding protein Chain: B: intelectin-1; structure of human intelectin-1 in complex with allyl-beta-2 galactofuranose
c4d56A_ hydrolase Chain: A: apnaa1; understanding bi-specificity of a-domains
c4wy8A_ hydrolase Chain: A: esterase; structural analysis of two fungal esterases from rhizomucor miehei2 explaining their substrate specificity
c4rbnD_ transferase Chain: D: sucrose synthase:glycosyl transferases group 1; the crystal structure of nitrosomonas europaea sucrose synthase:2 insights into the evolutionary origin of sucrose metabolism in3 prokaryotes
c4xa6C_ motor protein Chain: C: gp7-myh7(1777-1855)-eb1 chimera protein; crystal structure of the coiled-coil surrounding skip 4 of myh7
c4wy5A_ hydrolase Chain: A: esterase; structural analysis of two fungal esterases from rhizomucor miehei2 explaining their substrate specificity
c5bxyB_ transferase Chain: B: rna methyltransferase; crystal structure of rna methyltransferase from salinibacter ruber in2 complex with s-adenosyl-l-homocysteine
c4zoyA_ chaperone Chain: A: sqt1; crystal structure of the chaetomium thermophilum sqt1
c2mw6A_ toxin Chain: A: melittin; structure of the bee venom toxin melittin with [(c5h5)ru]+ fragment2 attached to the tryptophan residue
c5c1cA_ hydrolase Chain: A: pectinesterase; crystal structure of the pectin methylesterase from aspergillus niger2 in deglycosylated form
c5c4iC_ oxidoreductase Chain: C: oxalate oxidoreductase subunit beta; structure of an oxalate oxidoreductase
c5c0pA_ hydrolase Chain: A: endo-arabinase; the crystal structure of endo-arabinase from bacteroides2 thetaiotaomicron vpi-5482
c4xa6B_ motor protein Chain: B: gp7-myh7(1777-1855)-eb1 chimera protein; crystal structure of the coiled-coil surrounding skip 4 of myh7
c4rxhB_ transport protein Chain: B: importin subunit alpha; crystal structure of importin-alpha from neurospora crassa complexed2 with sv40nls
c4upiA_ hydrolase Chain: A: sulfatase family protein; dimeric sulfatase spas1 from silicibacter pomeroyi
c4ytgA_ hydrolase Chain: A: peptidylarginine deiminase; crystal structure of porphyromonas gingivalis peptidylarginine2 deiminase (ppad) mutant c351a in complex with dipeptide met-arg.
c4xa4A_ motor protein Chain: A: xrcc4-myh7(1551-1609) chimera protein; crystal structure of the coiled-coil surrounding skip 3 of myh7
c4zovB_ chaperone Chain: B: ribosome assembly protein sqt1; crystal structure of the saccharomyces cerevisiae sqt1
c5c4iB_ oxidoreductase Chain: B: oxalate oxidoreductase subunit delta; structure of an oxalate oxidoreductase
c4uirB_ lyase Chain: B: oleate hydratase; structure of oleate hydratase from elizabethkingia2 meningoseptica
c2mxfA_ transcription regulator/dna Chain: A: mvat; structure of the dna complex of the c-terminal domain of mvat
c4xa3A_ motor protein Chain: A: gp7-myh7(1361-1425)-eb1 chimera protein; crystal structure of the coiled-coil surrounding skip 2 of myh7
c4qqrB_ oxidoreductase Chain: B: 3,5-epimerase/4-reductase; structural insight into nucleotide rhamnose synthase/epimerase-2 reductase from arabidopsis thaliana
c4yonA_ protein binding Chain: A: phosphatidylinositol 3,4,5-trisphosphate-dependent rac p-rex1:rac1 complex
c3wwtB_ transcription/viral protein Chain: B: protein c'; crystal structure of the y3:stat1nd complex
c4rr5A_ transferase Chain: A: malonyl coa-acyl carrier protein transacylase; the crystal structure of synechocystis sp. pcc 6803 malonyl-coa: acp2 transacylase
c4ts6A_ transport protein Chain: A: rab3 interacting molecule variant 2; crystal structure of the rim c2a domain from drosophila.
c5a29A_ lyase Chain: A: exopolygalacturonate lyase; family 2 pectate lyase from vibrio vulnificus
c2mqkA_ hydrolase Chain: A: atp-dependent target dna activator b; solution structure of n terminal domain of the mub aaa+ atpase
c4y5oB_ transferase Chain: B: mitogen-activated protein kinase kinase kinase 3; ccm2 hhd in complex with mekk3 npb1


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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