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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jun 20

Fold library idPDB HeaderMoleculeTitle
c4z9nB_ transport protein Chain: B: amino acid abc transporter, periplasmic amino acid-binding abc transporter / periplasmic binding protein from brucella ovis with2 glutathione bound
c4xdnB_ cell cycle Chain: B: sister chromatid cohesion protein 2; crystal structure of scc4 in complex with scc2n
c4zadB_ lyase Chain: B: fdc1; structure of c. dubliensis fdc1 with the prenylated-flavin cofactor in2 the iminium form.
c4wz9A_ hydrolase Chain: A: agap004809-pa; apn1 from anopheles gambiae
c4za5A_ lyase Chain: A: fdc1; structure of a. niger fdc1 with the prenylated-flavin cofactor in the2 iminium and ketimine forms.
c5aiiP_ hydrolase Chain: P: limonene-1,2-epoxide hydrolase; discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries.3 ch55-sample-peg complex
c4ui9T_ cell cycle Chain: T: peptide; atomic structure of the human anaphase-promoting complex
c4zqrD_ oxidoreductase Chain: D: inosine-5'-monophosphate dehydrogenase,inosine-5'- crystal structure of the catalytic domain of the inosine monophosphate2 dehydrogenase from mycobacterium tuberculosis
c4ui9Y_ cell cycle Chain: Y: anaphase-promoting complex subunit 7; atomic structure of the human anaphase-promoting complex
c4zbtB_ lyase Chain: B: acetoacetate decarboxylase; streptomyces bingchenggensis aldolase-dehydratase in schiff base2 complex with pyruvate
c4ylrA_ ligase Chain: A: tubulin polyglutamylase ttll7; tubulin glutamylase
c4wpxB_ cell cycle Chain: B: putative sac3 family protein; chaetomium theromophilum trex2 cid domain complex
c4xo2A_ protein binding Chain: A: protein gnsa; crystal structure of gnsa from e.coli
c4ui9K_ cell cycle Chain: K: cell division cycle protein 16 homolog; atomic structure of the human anaphase-promoting complex
c4ui9D_ cell cycle Chain: D: anaphase-promoting complex subunit 15; atomic structure of the human anaphase-promoting complex
c4nbqB_ transferase Chain: B: polyribonucleotide nucleotidyltransferase; structure of the polynucleotide phosphorylase (cbu_0852) from coxiella2 burnetii
c2mqaA_ structural protein Chain: A: minor ampullate fibroin 1; 3d structure of rp domain of misp
c5bu9B_ hydrolase Chain: B: beta-n-acetylhexosaminidase; crystal structure of beta-n-acetylhexosaminidase from beutenbergia2 cavernae dsm 12333
c4zrkF_ signaling protein/transferase Chain: F: serine/threonine-protein kinase lats1; merlin-ferm and lats1 complex
c4ui9A_ cell cycle Chain: A: anaphase-promoting complex subunit 1; atomic structure of the human anaphase-promoting complex
c4zv9E_ structural genomics, unknown function Chain: E: uncharacterized protein; 2.00 angstrom resolution crystal structure of an uncharacterized2 protein from escherichia coli o157:h7 str. sakai
c4ui9R_ cell cycle Chain: R: fizzy-related protein homolog; atomic structure of the human anaphase-promoting complex
c4ui9W_ cell cycle Chain: W: anaphase-promoting complex subunit cdc26; atomic structure of the human anaphase-promoting complex
c4zkeA_ gtp binding protein Chain: A: superkiller protein 7; crystal structure of the s. cerevisiae ski7 gtpase-like domain, bound2 to gtp.
c4x2oB_ transport protein Chain: B: putative uncharacterized protein; sac3n peptide bound to mex67:mtr2
c4zkfA_ hydrolase Chain: A: 2',5'-phosphodiesterase 12; crystal structure of human phosphodiesterase
c5bt8D_ transferase Chain: D: phosphoglycerate kinase; x-ray crystal structure of phosphoglycerate kinase from acinetobacter2 baumannii
c4zriD_ signaling protein/transferase Chain: D: serine/threonine-protein kinase lats2; crystal structure of merlin-ferm and lats2
c4wpxC_ cell cycle Chain: C: putative uncharacterized protein; chaetomium theromophilum trex2 cid domain complex
c4zdxA_ hydrolase Chain: A: beta-lactamase; structure of oxa-51 beta-lactamase
c4ui9O_ cell cycle Chain: O: anaphase-promoting complex subunit 5; atomic structure of the human anaphase-promoting complex
c4qn9A_ hydrolase Chain: A: n-acyl-phosphatidylethanolamine-hydrolyzing phospholipase structure of human nape-pld
c4zrkE_ signaling protein/transferase Chain: E: serine/threonine-protein kinase lats1; merlin-ferm and lats1 complex
c4zosA_ structural genomics, unknown function Chain: A: protein ye0340 from yersinia enterocolitica subsp. 2.20 angstrom resolution crystal structure of protein ye0340 of2 unidentified function from yersinia enterocolitica subsp.3 enterocolitica 8081]
c4qtqA_ hydrolase inhibitor Chain: A: xac2610 protein; structure of a xanthomonas type iv secretion system related protein
c4xdnA_ cell cycle Chain: A: mau2 chromatid cohesion factor homolog; crystal structure of scc4 in complex with scc2n
c2n26A_ dna binding protein Chain: A: zinc finger and btb domain-containing protein 17; solution structure of miz-1 zinc fingers 3 and 4
c4yxpA_ viral protein Chain: A: mrna export factor; the structure of the folded domain of the signature multifunctional2 protein icp27 from herpes simplex virus-1 reveals an intertwined3 dimer.
c4ui9M_ cell cycle Chain: M: anaphase-promoting complex subunit 13; atomic structure of the human anaphase-promoting complex
c4x2hA_ transcription Chain: A: putative mrna export protein; sac3n peptide bound to mex67:mtr2
c4ui9S_ cell cycle Chain: S: f-box only protein 5; atomic structure of the human anaphase-promoting complex
c4zrkG_ signaling protein/transferase Chain: G: serine/threonine-protein kinase lats1; merlin-ferm and lats1 complex
c4ui9N_ cell cycle Chain: N: anaphase-promoting complex subunit 2; atomic structure of the human anaphase-promoting complex
c4zriC_ signaling protein/transferase Chain: C: serine/threonine-protein kinase lats2; crystal structure of merlin-ferm and lats2
c4ui9G_ cell cycle Chain: G: anaphase-promoting complex subunit cdc26; atomic structure of the human anaphase-promoting complex
c2n25A_ dna binding protein Chain: A: zinc finger and btb domain-containing protein 17; solution structure of miz-1 zinc finger 2
c4ui9E_ cell cycle Chain: E: anaphase-promoting complex subunit 16; atomic structure of the human anaphase-promoting complex
c4ui9B_ cell cycle Chain: B: anaphase-promoting complex subunit 11; atomic structure of the human anaphase-promoting complex
c2mmvA_ cell cycle Chain: A: cell division protein zapa; zapa mutant dimer from geobacillus stearothermophilus
c4ui9I_ cell cycle Chain: I: anaphase-promoting complex subunit 4; atomic structure of the human anaphase-promoting complex
c4wzgA_ protein binding Chain: A: autophagy-related protein 101; structure of human atg101
c4ui9C_ cell cycle Chain: C: cell division cycle protein 23 homolog; atomic structure of the human anaphase-promoting complex
c4wpxA_ cell cycle Chain: A: cell division control protein 31-like protein; chaetomium theromophilum trex2 cid domain complex
c4yknA_ transferase/transferase inhibitor Chain: A: phosphatidylinositol 3-kinase regulatory subunit alpha, pi3k alpha lipid kinase with active site inhibitor
c2n30A_ antifungal protein Chain: A: hemocyanin subunit l2; structure of ace-pvhct-nh2
c5aigA_ hydrolase Chain: A: limonene-1,2-epoxide hydrolase; discovery and characterization of thermophilic limonene-1,2-epoxide2 hydrolases from hot spring metagenomic libraries.3 tomsk-sample-valpromide complex
c4zyoA_ oxidoreductase Chain: A: acyl-coa desaturase; crystal structure of human integral membrane stearoyl-coa desaturase2 with substrate
c4zrkH_ signaling protein/transferase Chain: H: serine/threonine-protein kinase lats1; merlin-ferm and lats1 complex
c4ui9U_ cell cycle Chain: U: peptide; atomic structure of the human anaphase-promoting complex
c4zrjB_ signaling protein Chain: B: merlin; structure of merlin-ferm and ctd


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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