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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 May 09

Fold library idPDB HeaderMoleculeTitle
c4z8xC_ hydrolase Chain: C: atp-dependent zinc metalloprotease ftsh; truncated ftsh from a. aeolicus
c4pawA_ transferase Chain: A: orotate phosphoribosyltransferase; structure of hypothetical protein hp1257.
c4pavA_ unknown function Chain: A: glyoxalase family protein; structure of hypothetical protein sa1046 from s. aureus.
c5ahvF_ clathrin-binding protein Chain: F: anth domain of endocytic adaptor sla2; cryo-em structure of helical anth and enth tubules on pi(4,5)2 p2-containing membranes
c2mqlA_ rna binding protein Chain: A: protein hnrnpl; structural investigation of hnrnp l
c4yh6B_ immune system Chain: B: interleukin-1 receptor accessory protein-like 1; crystal structure of il1rapl1 ectodomain
c5agqA_ transcription Chain: A: bromodomain adjacent to zinc finger domain protein 2a; solution structure of the tam domain of human tip5 baz2a2 involved in epigenetic regulation of rrna genes
c4pg8B_ oxidoreductase Chain: B: homoserine dehydrogenase; crystal structure of s. aureus homoserine dehydrogenase at ph8.5
c4xw6B_ transferase Chain: B: camp-dependent protein kinase inhibitor alpha; x-ray structure of pkac with adp, free phosphate ion, cp20, magnesium2 ions
c4s13D_ lyase Chain: D: ferulic acid decarboxylase 1; ferulic acid decarboxylase (fdc1)
c4q1jA_ lyase Chain: A: polyketide biosynthesis enoyl-coa isomerase pksi; structure and mechanism of a dehydratase/decarboxylase enzyme couple2 involved in polyketide beta-branching
c4yfeA_ hydrolase Chain: A: receptor-type tyrosine-protein phosphatase delta; crystal structure of ptp delta fn1-fn2
c4r36A_ transferase Chain: A: putative acyl-[acyl-carrier-protein]--udp-n- crystal structure analysis of lpxa, a udp-n-acetylglucosamine2 acyltransferase from bacteroides fragilis 9343
c4xguB_ atp-binding protein Chain: B: putative pachytene checkpoint protein 2; structure of c. elegans pch-2
c4d7aA_ ligase Chain: A: trna threonylcarbamoyladenosine dehydratase; crystal structure of e. coli trna n6-threonylcarbamoyladenosine2 dehydratase, tcda, in complex with amp at 1.801 angstroem3 resolution
c4qaeR_ transport protein/signaling protein Chain: R: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c4y83B_ transferase Chain: B: mitogen-activated protein kinase kinase kinase 8; crystal structure of cot kinase domain in complex with 5-(2-amino-5-2 (quinolin-3-yl)pyridin-3-yl)-1,3,4-oxadiazole-2(3h)-thione
c4p63A_ transferase Chain: A: probable deoxyhypusine synthase; crystal structure of deoxyhypusine synthase from pyrococcus horikoshii
c4ui2C_ signaling protein Chain: C: repulsive guidance molecule c, rgmc, hemojuvelin; crystal structure of the ternary rgmb-bmp2-neo1 complex
c4uhzB_ signaling protein Chain: B: rgm domain family member b; crystal structure of the human rgmb-bmp2 complex, crystal form 1
c4qaeS_ transport protein/signaling protein Chain: S: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c3x2fA_ hydrolase Chain: A: adenosylhomocysteinase; a thermophilic s-adenosylhomocysteine hydrolase
c4z8zA_ unknown function Chain: A: uncharacterized protein; crystal structure of the hypothetical protein from ruminiclostridium2 thermocellum atcc 27405
c4zgfA_ unknown function Chain: A: uncharacterized protein; crystal structure of a duf4847 family protein (bvu_2626) from2 bacteroides vulgatus atcc 8482 at 1.00 a resolution
c4qaeU_ transport protein/signaling protein Chain: U: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c4umsA_ structural protein Chain: A: cellulosomal anchoring scaffoldin b; the crystal structure of the seventh scab type i cohesin2 from pseudobacteroides cellulosolvens
c4uhyC_ signaling protein Chain: C: repulsive guidance molecule a; crystal structure of the human rgma-bmp2 complex
c4qaeT_ transport protein/signaling protein Chain: T: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c4z1mJ_ hydrolase Chain: J: atpase inhibitor, mitochondrial; bovine f1-atpase inhibited by three copies of the inhibitor protein2 if1 crystallised in the presence of thiophosphate.
c5a1fA_ oxidoreductase Chain: A: lysine-specific demethylase 5b, lysine-specific crystal structure of the catalytic domain of plu1 in complex with2 n-oxalylglycine
c4zhbA_ structural genomics, unknown function Chain: A: ankyrin repeat-containing protein; n-terminal structure of ankyrin repeat-containing protein lega11 from2 legionella pneumophila
c4pcqC_ transcription Chain: C: possible transcriptional regulatory protein (probably crystal structure of mtbaldr (rv2779c)
c2mqmA_ rna binding protein Chain: A: protein hnrnpl; structural investigation of hnrnp l
c4z1mI_ hydrolase Chain: I: atpase inhibitor, mitochondrial; bovine f1-atpase inhibited by three copies of the inhibitor protein2 if1 crystallised in the presence of thiophosphate.
c4xw5B_ transferase Chain: B: camp-dependent protein kinase inhibitor alpha; x-ray structure of pkac with atp, cp20, calcium ions
c4qaeQ_ transport protein/signaling protein Chain: Q: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c2mvlA_ signaling protein Chain: A: tumor-associated calcium signal transducer 2; solution structure of cytosolic part of trop2
c4pauA_ unknown function Chain: A: nitrogen regulatory protein a; hypothetical protein sa1058 from s. aureus.
c3wycB_ oxidoreductase Chain: B: meso-diaminopimelate d-dehydrogenase; structure of a meso-diaminopimelate dehydrogenase in complex with nadp
c4qaeP_ transport protein/signaling protein Chain: P: hepcidin; crystal structure of an engineered lipocalin (anticalin) in complex2 with human hepcidin
c2mqhA_ dna binding protein Chain: A: nucleic acid binding protein; solution structure of the chlamydomonas reinhardtii nab1 cold shock2 domain, csd1
c2mvkA_ signaling protein Chain: A: tumor-associated calcium signal transducer 2; solution structure of phosphorylated cytosolic part of trop2
c4xw4B_ transferase Chain: B: camp-dependent protein kinase inhibitor alpha; x-ray structure of pkac with amppnp, sp20, calcium ions


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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