Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Apr 18

Fold library idPDB HeaderMoleculeTitle
c5aj8B_ structural protein Chain: B: tubulin binding cofactor c; tubulin binding cofactor c from leishmania major
c4cwcC_ isomerase Chain: C: replication initiation protein, replication initiation structure of rolling circle replication initiator protein (2 repde) from staphylococcus aureus
c4z0nA_ transcription Chain: A: periplasmic binding protein/laci transcriptional regulator; crystal structure of a periplasmic solute binding protein (ipr025997)2 from streptobacillus moniliformis dsm-12112 (smon_0317, target efi-3 511281) with bound d-galactose
c3wtbG_ oxidoreductase Chain: G: putative oxidoreductase; crystal structure of gox0525
c4uyqB_ cell adhesion/protein binding Chain: B: cellulosomal scaffoldin adaptor protein b; high resolution structure of the third cohesin scac in2 complex with the scab dockerin with a mutation in the c-3 terminal helix (in to si) from acetivibrio cellulolyticus4 displaying a type i interaction.
c4q16C_ ligase Chain: C: nh(3)-dependent nad(+) synthetase; structure of nad+ synthetase from deinococcus radiodurans
c2mxdA_ viral protein Chain: A: viral protein genome-linked; solution structure of vpg of porcine sapovirus
c4d50A_ oxidoreductase Chain: A: deoxyhypusine hydroxylase; structure of human deoxyhypusine hydroxylase
c4xhcB_ hydrolase Chain: B: alpha-l-rhamnosidase; rhamnosidase from klebsiella oxytoca with rhamnose bound
c4y97E_ transferase Chain: E: dna polymerase alpha subunit b; crystal structure of human pol alpha b-subunit in complex with c-2 terminal domain of catalytic subunit
c3wxvA_ membrane protein/immune system Chain: A: adiponectin receptor protein 1; crystal structure of the human adiponectin receptor 1
c4z24A_ oxidoreductase Chain: A: gmc-type oxidoreductase r135; mimivirus r135 (residues 50-702)
c4r0gA_ unknown function Chain: A: uncharacterized protein; crystal structure of lpg0393 from legionella pneumophila
c4uj0B_ antibiotic Chain: B: flower-specific gamma-thionin-like protein/acidic protein; crystal structure of the tomato defensin tpp3
c3wtcB_ oxidoreductase Chain: B: putative oxidoreductase; crystal structure of gox2036
c4wpbD_ protein binding Chain: D: alpha/beta-vegf-1; vascular endothelial growth factor in complex with alpha/beta-vegf-1
c4r0mB_ ligase Chain: B: mcyg protein; structure of mcyg a-pcp complexed with phenylalanyl-adenylate
c4wpbC_ protein binding Chain: C: alpha/beta-vegf-1; vascular endothelial growth factor in complex with alpha/beta-vegf-1
c4wo8A_ transferase Chain: A: taurocyamine kinase; the substrate -free and -bound crystal structures of the duplicated2 taurocyamine kinase from the human parasite schistosoma mansoni
c4y97H_ transferase Chain: H: dna polymerase alpha catalytic subunit; crystal structure of human pol alpha b-subunit in complex with c-2 terminal domain of catalytic subunit
c4uyqA_ cell adhesion/protein binding Chain: A: cellulosomal scaffoldin anchoring protein c; high resolution structure of the third cohesin scac in2 complex with the scab dockerin with a mutation in the c-3 terminal helix (in to si) from acetivibrio cellulolyticus4 displaying a type i interaction.
c4p55A_ dna binding protein Chain: A: viral irf2-like protein; crystal structure of dna binding domain of k11 from kshv
c4yleA_ transport protein Chain: A: periplasmic binding protein/laci transcriptional regulator; crystal structure of an abc transpoter solute binding protein2 (ipr025997) from burkholderia multivorans (bmul_1631, target efi-3 511115) with an unknown ligand modelled as alpha-d-erythrofuranose
c4r0mA_ ligase Chain: A: mcyg protein; structure of mcyg a-pcp complexed with phenylalanyl-adenylate
c4yvdA_ rna binding protein Chain: A: pleiotropic regulator 1; crytsal structure of human pleiotropic regulator 1 (prl1)
c2mntA_ isomerase Chain: A: tbpar42; solution structure of the ppiase domain of tbpar42
c4xxlA_ electron transport Chain: A: cytochrome c class i; crystal structure of class 1 cytochrome mtod from sideroxydans2 lithotrophicus es-1
c4p5pA_ hydrolase Chain: A: thij/pfpi family protein; x-ray structure of francisella tularensis rapid encystment protein 242 kda (rep24), gene product of ftn_0841


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D