Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jan 17

Fold library idPDB HeaderMoleculeTitle
c4uz2D_ hydrolase Chain: D: cell wall-binding endopeptidase-related protein; crystal structure of the n-terminal lysm domains from the putative2 nlpc/p60 d,l endopeptidase from t. thermophilus
c4rnxA_ oxidoreductase Chain: A: nadph dehydrogenase 1; k154 circular permutation of old yellow enzyme
c4xgiA_ oxidoreductase Chain: A: glutamate dehydrogenase; crystal structure of glutamate dehydrogenase from burkholderia2 thailandensis
c4qc8A_ virus Chain: A: vp2; structural annotation of pathogenic bovine parvovirus-1
c4odrB_ isomerase, chaperone Chain: B: peptidyl-prolyl cis-trans isomerase slyd, peptidyl-prolyl structure of slyd delta-if from thermus thermophilus in complex with2 fk506
c3wmqA_ sugar binding protein Chain: A: galactose-binding lectin; crystal structure of the complex between sll-2 and galnac.
c4u5iB_ hydrolase Chain: B: endoglucanase h; complex structure of mutant ctcel5e (e314a) with xylobiose
c4ppmB_ transferase Chain: B: aminotransferase; crystal structure of pige: a transaminase involved in the biosynthesis2 of 2-methyl-3-n-amyl-pyrrole (map) from serratia sp. fs14
c4rnvD_ oxidoreductase/inhibitor Chain: D: nadph dehydrogenase 1; g303 circular permutation of old yellow enzyme with the inhibitor p-2 hydroxybenzaldehyde
c4wm7D_ virus Chain: D: vp4; crystal structure of human enterovirus d68 in complex with pleconaril
c4x01D_ dna binding protein Chain: D: dna binding ctp1; s. pombe ctp1 tetramerization domain
c4d4oB_ translation Chain: B: protein ats1, diphthamide biosynthesis protein 3; crystal structure of the kti11 kti13 heterodimer spacegroup p64
c4rdkB_ viral protein Chain: B: capsid; crystal structure of norovirus boxer p domain in complex with lewis b2 tetrasaccharide
c4d2hF_ gene regulation Chain: F: rbbp8; crystal structure of the tetramerisation domain of human ctip
c4u10B_ hydrolase Chain: B: poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase; probing the structure and mechanism of de-n-acetylase from2 aggregatibacter actinomycetemcomitans
c4pw2A_ isomerase Chain: A: d-glucuronyl c5 epimerase b; crystal structure of d-glucuronyl c5 epimerase
c4cteB_ hydrolase Chain: B: endo-1,3-beta-glucanase, family gh16; crystal structure of the catalytic domain of the modular2 laminarinase zglamc mutant e142s in complex with a thio-3 oligosaccharide
c3wvoB_ cell invasion Chain: B: crispr-associated protein, cse1 family; crystal structure of thermobifida fusca cse1
c4o8tD_ hydrolase Chain: D: sortase; structure of sortase a c207a mutant from streptococcus pneumoniae
c3wy0A_ transferase Chain: A: putative uncharacterized protein csyb; the i375w mutant of csyb complexed with coa-sh
c4v02B_ cell cycle Chain: B: site-determining protein; minc:mind cell division protein complex, aquifex aeolicus
c4wujB_ circadian clock protein Chain: B: glycoside hydrolase family 15, cellulose signaling structural biochemistry of a fungal lov domain photoreceptor reveals2 an evolutionarily conserved pathway integrating blue-light and3 oxidative stress
c4p9fA_ transcription Chain: A: hth-type transcriptional regulator mcbr; e. coli mcbr/yncc
c4x1jA_ bmp binding protein Chain: A: neuroblastoma suppressor of tumorigenicity 1; x-ray crystal structure of the dimeric bmp antagonist nbl1
c4pbdA_ protein binding Chain: A: protein shq1 homolog; crystal structure of the n-terminal cs domain of human shq1
c4d2hB_ gene regulation Chain: B: rbbp8; crystal structure of the tetramerisation domain of human ctip
c4xgnD_ oxidoreductase Chain: D: 3-hydroxyacyl-coa dehydrogenase; crystal structure of 3-hydroxyacyl-coa dehydrogenase in complex with2 nad from burkholderia thailandensis
c4wm8B_ virus Chain: B: vp2; crystal structure of human enterovirus d68
c4ntfA_ lyase Chain: A: leukotriene c4 synthase; mus musculus ltc4 synthase in s-hexyl-gsh complex form
c4xh9D_ signaling protein Chain: D: neuroepithelial cell-transforming gene 1 protein; crystal structure of human rhoa in complex with dh/ph fragment of the2 guanine nucleotide exchange factor net1
c4oecD_ hydrolase Chain: D: glycerophosphoryl diester phosphodiesterase; crystal structure of glycerophosphodiester phosphodiesterase from2 thermococcus kodakarensis kod1
c4xfdA_ ligase Chain: A: nh(3)-dependent nad(+) synthetase; crystal structure of a nh(3)-dependent nad(+) synthetase from2 pseudomonas aeruginosa
c4r58C_ de novo protein Chain: C: leucine rich repeat protein; crystal structure of computational designed leucine rich repeats2 dlrr_a in space group p21
c4crrA_ hydrolase Chain: A: endo-1,3-beta-glucanase, family gh16; crystal structure of the c-terminal cbm6 of lamc a marine2 laminarianse from zobellia galactanivorans
c4xa8A_ oxidoreductase Chain: A: d-isomer specific 2-hydroxyacid dehydrogenase nad-binding; crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 from xanthobacter autotrophicus py2
c4xghA_ transferase Chain: A: citrate synthase; x-ray crystal structure of citrate synthase from burkholderia2 thailandensis
c4wnoA_ transferase/transferase inhibitor Chain: A: serine/threonine-protein kinase ulk1; structure of ulk1 bound to an inhibitor
c4v02C_ cell cycle Chain: C: probable septum site-determining protein minc; minc:mind cell division protein complex, aquifex aeolicus
c4d4pG_ translation Chain: G: protein ats1, diphthamide biosynthesis protein 3; crystal structure of the kti11 kti13 heterodimer spacegroup p65
c4ux5B_ transcription Chain: B: transcription factor mbp1; structure of dna complex of pcg2
c4tsmC_ cell adhesion Chain: C: maltose-binding protein, pilin chimera,maltose-binding mbp-fusion protein of pila1 from c. difficile r20291 residues 26-166
c2miaA_ hydrolase inhibitor Chain: A: alpha amylase inhibitor; solution structure of allatide o4, conformation 2
c4xdqA_ hydrolase Chain: A: glycoside hydrolase family protein; crystal structure of a glycoside hydrolase family protein (rv03152 ortholog) from mycobacterium thermorestibile
c4ot9A_ transcription Chain: A: nuclear factor nf-kappa-b p100 subunit; crystal structure of the c-terminal domain of p100/nf-kb2
c4wm8A_ virus Chain: A: vp1; crystal structure of human enterovirus d68
c4tvmA_ transferase Chain: A: citrate synthase; structure of citrate synthase from mycobacterium tuberculosis
c3wywA_ transferase Chain: A: glutathione s-transferase; structural characterization of catalytic site of a nilaparvata lugens2 delta-class glutathione transferase
c4wyoB_ ligase/ligase inhibitor Chain: B: acetyl-coa carboxylase; crystal structure of human-yeast chimera acetyl coa carboxylase ct2 domain bound to compound 1
c4xcmB_ hydrolase Chain: B: cell wall-binding endopeptidase-related protein; crystal structure of the putative nlpc/p60 d,l endopeptidase from t.2 thermophilus
c4xcxA_ transferase Chain: A: small rna 2'-o-methyltransferase; methyltransferase domain of small rna 2'-o-methyltransferase
c4qxlA_ motor protein Chain: A: flagellar protein flhe; crystal structure of flhe
c4tvoB_ oxidoreductase Chain: B: malate dehydrogenase; structure of malate dehydrogenase from mycobacterium tuberculosis
c4d6uI_ oxidoreductase Chain: I: cytochrome b-c1 complex subunit rieske, mitochondrial; cytochrome bc1 bound to the 4(1h)-pyridone gsk932121
c4d6tI_ electron transport Chain: I: cytochrome b-c1 complex subunit rieske, mitochondrial; cytochrome bc1 bound to the 4(1h)-pyridone gw844520
c4wm7C_ virus Chain: C: vp3; crystal structure of human enterovirus d68 in complex with pleconaril


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D