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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Sep 27

Fold library idPDB HeaderMoleculeTitle
c3wl7A_ hydrolase Chain: A: oxidized polyvinyl alcohol hydrolase; the complex structure of poph s172c with ligand, aca
c4uv3I_ transport protein Chain: I: curli production assembly/transport component csgg; structure of the curli transport lipoprotein csgg in its2 membrane-bound conformation
c3j7kE_ translation Chain: E: eukaryotic translation initiation factor 3 subunit e; model of the human eif3 pci-mpn octamer docked into the 43s em map
c4weoD_ oxidoreductase Chain: D: putative acetoin(diacetyl) reductase; crystal structure of a putative acetoin(diacetyl) reductase2 burkholderia cenocepacia
c4mtsA_ lyase Chain: A: lactoylglutathione lyase; ni- and zn-bound gloa2 at high resolution
c4tumD_ protein binding Chain: D: ankyrin repeat domain-containing protein 2; crystal structure of ankyrin repeat domain of akr2
c4r80A_ de novo protein Chain: A: or486; crystal structure of a de novo designed beta sheet protein, cystatin2 fold, northeast structural genomics consortium (nesg) target or486
c3wlaA_ hydrolase Chain: A: oxidized polyvinyl alcohol hydrolase; crystal structure of soph native
c4nqqC_ cell adhesion Chain: C: cadherin-3; crystal structure of mouse p-cadherin extracellular domains ec1-ec2
c4okoA_ hydrolase Chain: A: rapid encystment phenotype protein 34 kda; crystal structure of francisella tularensis rep34 (rapid encystment2 phenotype protein 34 kda)
c3j7kM_ translation Chain: M: eukaryotic translation initiation factor 3 subunit m; model of the human eif3 pci-mpn octamer docked into the 43s em map
c4wbtA_ transferase Chain: A: probable histidinol-phosphate aminotransferase; crystal structure of histidinol-phosphate aminotransferase from2 sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
c4lvjA_ dna binding protein/dna Chain: A: plasmid recombination enzyme; mobm relaxase domain (mobv; mob_pre) bound to plasmid pmv158 orit dna2 (22nt). mn-bound crystal structure at ph 5.5
c4nk1B_ oxygen binding Chain: B: hemoglobin-like protein; crystal structure of phosphate-bound hell's gate globin iv
c4wcwB_ translation Chain: B: ribosomal silencing factor rsfs; ribosomal silencing factor during starvation or stationary phase2 (rsfs) from mycobacterium tuberculosis
c4wedA_ transport protein Chain: A: abc transporter, periplasmic solute-binding protein; crystal structure of abc transporter substrate-binding protein from2 sinorhizobium meliloti
c4c4kO_ transferase Chain: O: obscurin; crystal structure of the titin m10-obscurin ig domain 1 complex
c4weqA_ oxidoreductase Chain: A: nad-dependent dehydrogenase; crystal structure of nadp-dependent dehydrogenase from sinorhizobium2 meliloti in complex with nadp and sulfate
c4mt4C_ transport protein Chain: C: cmec; crystal structure of the campylobacter jejuni cmec outer membrane2 channel
c3j7jH_ translation Chain: H: eukaryotic translation initiation factor 3 subunit h; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c4lidA_ viral protein Chain: A: a-100; a100, a dna binding scaffold from sulfolobus spindle-shape virus 1
c3j7jM_ translation Chain: M: eukaryotic translation initiation factor 3 subunit m; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c2msvA_ membrane protein Chain: A: mixed lineage kinase domain-like protein; solution structure of the mlkl n-terminal domain
c3j7kA_ translation Chain: A: eukaryotic translation initiation factor 3 subunit a; model of the human eif3 pci-mpn octamer docked into the 43s em map
c4us3A_ transport protein Chain: A: transporter; crystal structure of the bacterial nss member mhst in an2 occluded inward-facing state
c4u7jB_ ligase Chain: B: argininosuccinate synthase; crystal structure of argininosuccinate synthase from mycobacterium2 thermoresistibile
c4wbsA_ transport protein Chain: A: abc transporter related; crystal structure of an abc transporter related protein from2 burkholderia phymatum
c4pzgB_ protein transport Chain: B: sorting nexin-10; crystal structure of human sorting nexin 10 (snx10)
c2mj6A_ transferase Chain: A: putative two-component system histidine kinase; solution structure of the extracellular sensor domain of drak2 histidine kinase
c4werA_ transferase Chain: A: diacylglycerol kinase catalytic domain protein; crystal structure of diacylglycerol kinase catalytic domain protein2 from enterococcus faecalis v583
c3j7jC_ translation Chain: C: eukaryotic translation initiation factor 3 subunit c; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c3j7jL_ translation Chain: L: eukaryotic translation initiation factor 3 subunit l; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c3j7kH_ translation Chain: H: eukaryotic translation initiation factor 3 subunit h; model of the human eif3 pci-mpn octamer docked into the 43s em map
c3j7jE_ translation Chain: E: eukaryotic translation initiation factor 3 subunit e; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c3j7jF_ translation Chain: F: eukaryotic translation initiation factor 3 subunit f; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map
c4u4cB_ hydrolase Chain: B: protein air2,poly(a) rna polymerase protein 2; the molecular architecture of the tramp complex reveals the2 organization and interplay of its two catalytic activities
c3j7kL_ translation Chain: L: eukaryotic translation initiation factor 3 subunit l; model of the human eif3 pci-mpn octamer docked into the 43s em map
c4tloB_ isomerase Chain: B: alanine racemase; alanine racemase from acinetobacter baumannii
c4wd0A_ isomerase Chain: A: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) crystal structure of hisap form arthrobacter aurescens
c4pviA_ hydrolase Chain: A: gh62 hydrolase; crystal structure of gh62 hydrolase in complex with xylotriose
c3j7kF_ translation Chain: F: eukaryotic translation initiation factor 3 subunit f; model of the human eif3 pci-mpn octamer docked into the 43s em map
c2mnuB_ cell adhesion Chain: B: apt; backbone and side chain 1h, 13c, and 15n chemical shift assignments2 for edb and specific binding aptide
c3j7kC_ translation Chain: C: eukaryotic translation initiation factor 3 subunit c; model of the human eif3 pci-mpn octamer docked into the 43s em map
c4loxA_ hydrolase/dna Chain: A: laglidadg homing endonuclease i-smami; crystal structure of the i-smami laglidadg homing endonuclease bound2 to cleaved dna
c3j7jA_ translation Chain: A: eukaryotic translation initiation factor 3 subunit a; model of the human eif3 pci-mpn octamer docked into the 43s-hcv ires2 em map


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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