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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Aug 30

Fold library idPDB HeaderMoleculeTitle
c4cz5D_ cell cycle Chain: D: cellular tumor antigen p53; truncated tetramerization domain of zebrafish p53 (crystal form i)
c4d1mE_ transcription Chain: E: cellular tumor antigen p53; tetramerization domain of zebrafish p53 (crystal form ii)
c4mjsQ_ transferase/protein binding Chain: Q: protein kinase c zeta type; crystal structure of a pb1 complex
c4p7dA_ toxin Chain: A: antitoxin hicb3; antitoxin hicb3 crystal structure
c4pehC_ hydrolase/rna Chain: C: rna lariat debranching enzyme, putative; dbr1 in complex with synthetic linear rna
c4c1wA_ sugar binding protein Chain: A: neuraminidase; carbohydrate binding domain from streptococcus pneumoniae2 nana sialidase complexed with 3'-sialyllactose
c4uukE_ hydrolase Chain: E: dynamin-1; human dynamin 1 k44a superconstricted polymer stabilized2 with gtp strand 2
c4r2bB_ transport protein Chain: B: extracellular solute-binding protein family 1; crystal structure of sugar transporter oant_3817 from ochrobactrum2 anthropi, target efi-510558, with bound glucose
c4q7jD_ translation/transferase Chain: D: 30s ribosomal protein s1; complex structure of viral rna polymerase
c4uorK_ transferase Chain: K: lipoteichoic acid synthase; structure of lipoteichoic acid synthase ltas from listeria2 monocytogenes
c4plrA_ peptide binding protein Chain: A: arm00008; crystal structures of designed armadillo repeat proteins: implications2 of construct design and crystallization conditions on overall3 structure.
c4qrlA_ structural genomics, unknown function Chain: A: hypothetical protein; crystal structure of a hypothetical protein (bacuni_01346) from2 bacteroides uniformis atcc 8492 at 1.79 a resolution
c4tu3X_ hydrolase/protein transport Chain: X: phosphoinositide phosphatase sac1; crystal structure of yeast sac1/vps74 complex
c4r31A_ transferase Chain: A: uridine phosphorylase; crystal structure of a putative uridine phosphorylase from2 actinobacillus succinogenes 130z (target nysgrc-029667 )
c4p78D_ toxin Chain: D: hica3 toxin; hica3 and hicb3 toxin-antitoxin complex
c2msuA_ cell adhesion Chain: A: fermitin family homolog 2; nmr structure of kindlin-2 f2 339-358
c4pjwA_ cell cycle Chain: A: cohesin subunit sa-2; crystal structure of human stromal antigen 2 (sa2) in complex with2 sister chromatid cohesion protein 1 (scc1), with bound mes
c4q0rB_ hydrolase/dna Chain: B: dna repair protein rad2; protein-nucleic acid complex (complex i)
c4nkbB_ transferase Chain: B: probable serine/threonine-protein kinase zyg-1; crystal structure of the cryptic polo box (cpb)of zyg-1
c4nibA_ hormone Chain: A: insulin a chain; crystal structure of human insulin mutant b20 d-ala, b23 d-ala
c4uopB_ transferase Chain: B: lipoteichoic acid primase; crystal structure of the lipoteichoic acid synthase ltap2 from listeria monocytogenes
c4r01B_ oxidoreductase Chain: B: putative nadh-flavin reductase; crystal structure of sp1627, a putative nadh-flavin reductase, from2 streptococcus pneumoniae tigr4
c4mpiA_ sugar binding protein Chain: A: class i chitinase; crystal structure of the chitin-binding module (cbm18) of a chitinase-2 like protein from hevea brasiliensis
c4pjuB_ cell cycle Chain: B: double-strand-break repair protein rad21 homolog; crystal structure of human stromal antigen 2 (sa2) in complex with2 sister chromatid cohesion protein 1 (scc1)
c4madA_ hydrolase Chain: A: beta-galactosidase; crystal structure of beta-galactosidase c (bgac) from bacillus2 circulans atcc 31382
c4n40A_ cell cycle Chain: A: protein ect2; crystal structure of human epithelial cell-transforming sequence 22 protein
c4p0dA_ structural protein Chain: A: trypsin-resistant surface t6 protein; the t6 backbone pilin of serotype m6 streptococcus pyogenes has a2 modular three-domain structure decorated with variable loops and3 extensions
c4txdA_ rna binding protein Chain: A: csc2; crystal structure of thermofilum pendens csc2
c4r03A_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a hypothetical protein (bdi_3222) from2 parabacteroides distasonis atcc 8503 at 1.50 a resolution
c4r2fA_ transport protein Chain: A: extracellular solute-binding protein family 1; crystal structure of sugar transporter achl_0255 from arthrobacter2 chlorophenolicus a6, target efi-510633, with bound laminaribiose
c2rttA_ hydrolase Chain: A: chic; solution structure of the chitin-binding domain of chi18ac from2 streptomyces coelicolor
c4uw0A_ transferase Chain: A: wbdd; low resolution structure of wbdd with c-terminal bundle2 ordered to residue 505
c2mbeA_ protein binding Chain: A: ubiquitin d; backbone 1h and 15n chemical shift assignments for the first domain of2 fat10
c4phbA_ unknown function Chain: A: uncharacterized protein; structure of the polysaccharide lyase-like protein cthe_2159 from c.2 thermocellum, gadolinium derivative
c4ncdA_ chaperone Chain: A: gram-negative pili assembly chaperone, n-terminal domain crystal structure of class 5 fimbriae chaperone cfaa
c4ogaA_ hormone receptor/hormone/immune system Chain: A: insulin a chain; insulin in complex with site 1 of the human insulin receptor
c4mzvA_ cell adhesion Chain: A: epithelial cell adhesion molecule; crystal structure of extracellular part of human epcam


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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