Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Jun 21

Fold library idPDB HeaderMoleculeTitle
c4o4dA_ transferase Chain: A: inositol hexakisphosphate kinase; crystal structure of an inositol hexakisphosphate kinase ehip6ka in2 complexed with atp and ins(1,4,5)p3
c3j6vO_ ribosome Chain: O: 28s ribosomal protein s15, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c3wccC_ transferase Chain: C: farnesyltransferase, putative; the complex structure of tcsqs with ligand, e5700
c4pqgB_ transferase Chain: B: glycosyltransferase gtf1; crystal structure of the pneumococcal o-glcnac transferase gtfa in2 complex with udp and glcnac
c4p9sA_ oxidoreductase Chain: A: dimethylglycine dehydrogenase; crystal structure of the mature form of rat dmgdh
c3wqyB_ ligase/rna Chain: B: alanine--trna ligase; crystal structure of aminoacyl-trna synthetase in complex with a trna
c3j6vJ_ ribosome Chain: J: 28s ribosomal protein s10, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4ojuA_ structural genomics, unknown function Chain: A: hypothetical leucine rich repeat protein; crystal structure of a hypothetical leucine rich repeat protein2 (baccap_00569) from bacteroides capillosus atcc 29799 at 2.00 a3 resolution
c4p99C_ unknown function Chain: C: mpafp_rii tetra-tandemer; ca2+-stabilized adhesin helps an antarctic bacterium reach out and2 bind ice
c4icxA_ transport protein Chain: A: centrosomal protein of 120 kda; n-terminal c2 domain of human cep120
c4prkB_ oxidoreductase Chain: B: 4-phosphoerythronate dehydrogenase; crystal structure of d-lactate dehydrogenase (d-ldh) from2 lactobacillus jensenii
c4qezC_ hydrolase Chain: C: 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase; crystal structure of 5'-methylthioadenosine/s-adenosylhomocysteine2 nucleosidase from bacillus anthracis
c4qhqA_ transport protein Chain: A: lipoprotein; the structure of a nutrient binding protein from burkholderia2 cenocepacia bound to methionine
c4pqxC_ structural genomics, unknown function Chain: C: uncharacterized protein; crystal structure of a hypothetical protein (baccac_02139) from2 bacteroides caccae atcc 43185 at 2.39 a resolution
c4qfhA_ isomerase Chain: A: glucose-6-phosphate isomerase; structure of a glucose-6-phosphate isomerase from trypanosoma cruzi
c4ne0A_ hydrolase Chain: A: l-arginine beta-hydroxylase; crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
c4cxiA_ transcription Chain: A: kelch-like ech-associated protein 1; btb domain of keap1
c4ow1A_ hydrolase Chain: A: resuscitation-promoting factor rpfc; crystal structure of resuscitation promoting factor c
c4pwuC_ signaling protein Chain: C: modulator protein mzra; crystal structure of a modulator protein mzra (kpn_03524) from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 2.45 a3 resolution
c4ploA_ protein binding Chain: A: netrin-1; crystal structure of chicken netrin-1 (ln-le3) in complex with mouse2 dcc (fn4-5)
c4ptzC_ oxidoreductase Chain: C: fmn reductase ssue; crystal structure of the escherichia coli alkanesulfonate fmn2 reductase ssue in fmn-bound form
c3j6vI_ ribosome Chain: I: 28s ribosomal protein s9, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4m03A_ calcium binding protein Chain: A: serine-rich adhesin for platelets; c-terminal fragment(residues 576-751) of binding region of srap
c4m01D_ cell adhesion Chain: D: serine-rich adhesin for platelets; n terminal fragment(residues 245-575) of binding region of srap
c3j6vP_ ribosome Chain: P: 28s ribosomal protein s16, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c3j6vU_ ribosome Chain: U: 28s ribosomal protein s21, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4m02A_ calcium binding protein Chain: A: serine-rich adhesin for platelets; middle fragment(residues 494-663) of the binding region of srap
c4tkrB_ membrane protein Chain: B: thiamine transporter thia; native-sad phasing for thit from listeria monocytogenes serovar.
c4q6uA_ unknown function Chain: A: uncharacterized protein; crystal structure of a putative uncharacterized protein from2 mycobacterium tuberculosis
c4d25A_ hydrolase Chain: A: bmvlg protein; crystal structure of the bombyx mori vasa helicase (e339q)2 in complex with rna and amppnp
c4puxA_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a hypothetical protein (abaye2633) from2 acinetobacter baumannii aye at 1.43 a resolution
c4lm6A_ photosynthesis Chain: A: cryptophyte phycocyanin alpha chain; light harvesting complex pc612 from the cryptophyte hemiselmis2 virescens m1635
c3wjnA_ transferase Chain: A: octaprenyl diphosphate synthase; crystal structure of octaprenyl pyrophosphate synthase from2 escherichia coli with farnesyl s-thiol-pyrophosphate (fspp)
c1vx4n_ ribosome Chain: N: ribosomal protein el15; structure of the 80s mammalian ribosome bound to eef2. this entry2 contains the large subunit ribosomal proteins.
c4ne0B_ hydrolase Chain: B: l-arginine beta-hydroxylase; crystal structure of non-heme iron oxygenase orfp d157a mutant in2 complex with (3s)-hydroxy-l-arg
c4q0yC_ structural genomics, unknown function Chain: C: uncharacterized protein; crystal structure of a hypothetical protein (clospo_01618) from2 clostridium sporogenes atcc 15579 at 1.70 a resolution
c4nhoA_ hydrolase Chain: A: probable atp-dependent rna helicase ddx23; structure of the spliceosomal dead-box protein prp28
c3j6vQ_ ribosome Chain: Q: 28s ribosomal protein s17, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c3j6vG_ ribosome Chain: G: 28s ribosomal protein s7, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c1vx1n_ ribosome Chain: N: ribosomal protein el15; structure of the translating mammalian ribosome-sec61 complex. this2 entry contains the large subunit ribosomal proteins.
c4liqE_ immune system Chain: E: macrophage colony-stimulating factor 1 receptor; structure of the extracellular domain of human csf-1 receptor in2 complex with the fab fragment of rg7155
c3j6vE_ ribosome Chain: E: 28s ribosomal protein s5, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4qglA_ oxidoreductase Chain: A: acireductone dioxygenase; acireductone dioxygenase from bacillus anthracis with three cadmium2 ions
c4l7vA_ transferase Chain: A: protein-l-isoaspartate o-methyltransferase; crystal structure of protein l-isoaspartyl-o-methyltransferase of2 vibrio cholerae
c3j6vR_ ribosome Chain: R: 28s ribosomal protein s18a, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c1vwxn_ ribosome Chain: N: ribosomal protein el15; structure of the mammalian 60s ribosomal subunit. this entry contains2 the large subunit ribosomal proteins.
c4onyB_ transport protein Chain: B: extracellular solute-binding protein family 5; crystal structure of a abc transporter, periplasmic substrate-binding2 protein from brucella melitensis
c4lmxE_ photosynthesis Chain: E: cryptophyte phycoerythrin (alpha-1/alpha-2 chain); light harvesting complex pe555 from the cryptophyte hemiselmis2 andersenii ccmp644
c4pqkA_ dna binding protein Chain: A: maltose abc transporter periplasmic protein, truncated c-terminal domain of dna binding protein
c4qgrA_ transferase Chain: A: degt/dnrj/eryc1/strs aminotransferase; crystal structure of a degt dnrj eryc1 strs aminotransferase from2 brucella abortus
c4lmsC_ photosynthesis Chain: C: cryptophyte phycocyanin (alpha-2 chain); light harvesting complex pc645 from the cryptophyte chroomonas sp.2 ccmp270
c4ploB_ protein binding Chain: B: netrin receptor dcc; crystal structure of chicken netrin-1 (ln-le3) in complex with mouse2 dcc (fn4-5)
c4q28B_ structural protein Chain: B: periplakin; crystal structure of the plectin 1 and 2 repeats of the human2 periplakin. northeast structural genomics consortium (nesg) target3 hr9083a
c4pl0B_ transport protein Chain: B: microcin-j25 export atp-binding/permease protein mcjd; crystal structure of the antibacterial peptide abc transporter mcjd in2 an outward occluded state
c3j6vK_ ribosome Chain: K: 28s ribosomal protein s11, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4plnD_ protein binding Chain: D: neogenin; crystal structure of chicken netrin-1 (ln-le3) complexed with mouse2 neogenin (fn4-5)
c1vx11_ ribosome Chain: 1: sec61 alpha subunit; structure of the translating mammalian ribosome-sec61 complex. this2 entry contains the large subunit ribosomal proteins.
c3j6vN_ ribosome Chain: N: 28s ribosomal protein s14, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4m2jA_ transferase Chain: A: aminotransferase; crystal structure of plp-dependent cyclase orfr in complex with au
c4pw1B_ structural genomics, unknown function Chain: B: uncharacterized protein; crystal structure of a hypothetical protein (clolep_02462) from2 clostridium leptum dsm 753 at 2.10 a resolution
c4luaA_ transferase Chain: A: n-acetyltransferase; crystal structure of n-acetyltransferase from staphylococcus aureus2 mu50
c4lmsA_ photosynthesis Chain: A: cryptophyte phycocyanin (alpha-1 chain); light harvesting complex pc645 from the cryptophyte chroomonas sp.2 ccmp270
c3j6vL_ ribosome Chain: L: 28s ribosomal protein s12, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4q34A_ hydrolase Chain: A: uncharacterized protein; crystal structure of a putative esterase (bdi_1566) from2 parabacteroides distasonis atcc 8503 at 1.60 a resolution
c4p3yB_ translation/oxidoreductase Chain: B: thiol:disulfide interchange protein; crystal structure of acinetobacter baumannii dsba in complex with ef-2 tu
c3j6vF_ ribosome Chain: F: 28s ribosomal protein s6, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c1vwzn_ ribosome Chain: N: ribosomal protein el15; structure of the idle mammalian ribosome-sec61 complex. this entry2 contains the large subunit ribosomal proteins.
c4pysB_ hydrolase Chain: B: beta-n-acetylhexosaminidase; the crystal structure of beta-n-acetylhexosaminidase from bacteroides2 fragilis nctc 9343
c3j6vV_ ribosome Chain: V: 28s ribosomal protein s24, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c3j6vB_ ribosome Chain: B: 28s ribosomal protein s2, mitochondrial; cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome
c4m00A_ cell adhesion Chain: A: serine-rich adhesin for platelets; crystal structure of the ligand binding region of staphylococcal2 adhesion srap
c2mkxA_ hydrolase Chain: A: autolysin; solution structure of lysm the peptidoglycan binding domain of2 autolysin atla from enterococcus faecalis
c4q5tA_ transport protein Chain: A: lipoprotein; crystal structure of an atmb (putative membrane lipoprotein) from2 streptococcus mutans ua159 at 1.91 a resolution


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D