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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 May 03

Fold library idPDB HeaderMoleculeTitle
c4cxfB_ transcription Chain: B: cnry; structure of cnrh in complex with the cytosolic domain of cnry
c4c95C_ dna replication Chain: C: dna polymerase alpha-binding protein; crystal structure of the carboxy-terminal domain of yeast2 ctf4 bound to sld5
c3wrbB_ oxidoreductase Chain: B: gallate dioxygenase; crystal structure of the anaerobic h124f desb-gallate complex
c4p79A_ cell adhesion Chain: A: claudin-15; crystal structure of mouse claudin-15
c4p17A_ unknown function Chain: A: rabgap/tbc protein; crystal structure of the chlamydomonas flagellar rabgap tbc domain.
c4o8uE_ unknown function Chain: E: uncharacterized protein pf2046; structure of pf2046
c4psmA_ dna binding protein Chain: A: ssdna binding protein; crystal structure of pfuthermo-dbp-rp1 (crystal form ii)
c4psoH_ dna binding protein Chain: H: ssdna binding protein; crystal structure of apethermo-dbp-rp2 bound to ssdna dt10
c4c8hC_ dna replication Chain: C: ctf4; crystal structure of the c-terminal region of yeast ctf4,2 selenomethionine protein.
c4ptbA_ transcription Chain: A: nuclear autoantigen sp-100; crystal structure of human sp100 phd-bromodomain in the free state
c4orfA_ transferase Chain: A: acetyltransferase pat; camp-binding acyltransferase from mycobacterium smegmatis, mutant r95k
c2m0qA_ membrane protein Chain: A: potassium voltage-gated channel subfamily e member 2; solution nmr analysis of intact kcne2 in detergent micelles2 demonstrate a straight transmembrane helix
c4bk9B_ lyase Chain: B: 2-dehydro-3-deoxyphosphogluconate crystal structure of 2-keto-3-deoxy-6-phospho-gluconate2 aldolase from zymomonas mobilis atcc 29191
c4py6C_ protein binding Chain: C: bromodomain protein, putative; crystal structure of bromodomain of pfa0510w from plasmodium2 falciparum
c4bwqB_ transcription Chain: B: polyglutamine-binding protein 1; crystal structure of u5-15kd in a complex with pqbp1
c4l92A_ viral protein Chain: A: receptor binding protein; structure of the rbp from lactococcal phage 1358 in complex with 22 glcnac molecules
c4kdcA_ transferase Chain: A: 3-demethylubiquinone-9 3-methyltransferase; crystal structure of ubig
c4bwqF_ transcription Chain: F: polyglutamine-binding protein 1; crystal structure of u5-15kd in a complex with pqbp1
c3wkxA_ hydrolase Chain: A: non-reducing end beta-l-arabinofuranosidase; crystal structure of gh127 beta-l-arabinofuranosidase hypba1 from2 bifidobacterium longum arabinose complex form
c4bwsE_ transcription Chain: E: polyglutamine-binding protein 1; crystal structure of the heterotrimer of pqbp1, u5-15kd and2 u5-52kd.
c4pr3A_ hydrolase Chain: A: 5'-methylthioadenosine nucleosidase / s- crystal structure of brucella melitensis 5'-methylthioadenosine/s-2 adenosylhomocysteine nucleosidase
c4cxfA_ transcription Chain: A: rna polymerase sigma factor cnrh; structure of cnrh in complex with the cytosolic domain of cnry
c4cdiC_ membrane protein Chain: C: predicted protein; crystal structure of acrb-acrz complex
c4pagA_ transport protein Chain: A: periplasmic binding protein; abc transporter solute binding protein from sulfurospirillum2 deleyianum dsm 6946
c2mi2A_ transport protein Chain: A: sec-independent protein translocase protein tatb; solution structure of the e. coli tatb protein in dpc micelles
c4bwqH_ transcription Chain: H: polyglutamine-binding protein 1; crystal structure of u5-15kd in a complex with pqbp1
c4ouqA_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a hypothetical protein (bf1468) from bacteroides2 fragilis ych46 at 1.55 a resolution
c4onbA_ hydrolase Chain: A: crispr-associated exonuclease, cas4 family; crystal structure of crispr-associated exonuclease (cas4 family) from2 pyrobaculum calidifontis jcm 11548
c4oltA_ hydrolase Chain: A: chitosanase; chitosanase complex structure
c4csqA_ structural protein Chain: A: uncharacterized protein; nmr solution structure of pa3793 from pseudomonas aeruginosa
c4p0eB_ unknown function Chain: B: maf-like protein yhde; yhde e33a (p21212121 space group)
c4kegA_ lipid binding protein Chain: A: maltose-binding periplasmic/palate lung and nasal crystal structure of mbp fused human splunc1
c3wg7T_ oxidoreductase Chain: T: cytochrome c oxidase subunit 6a2, mitochondrial; a 1.9 angstrom radiation damage free x-ray structure of large (420kda)2 protein by femtosecond crystallography
c4bwsB_ transcription Chain: B: polyglutamine-binding protein 1; crystal structure of the heterotrimer of pqbp1, u5-15kd and2 u5-52kd.
c2mdrA_ hydrolase Chain: A: double-stranded rna-specific adenosine deaminase; solution structure of the third double-stranded rna-binding domain2 (dsrbd3) of human adenosine-deaminase adar1
c2m9lA_ toxin Chain: A: beta-theraphotoxin-tp1a; solution structure of protoxin-1
c4bwqD_ transcription Chain: D: polyglutamine-binding protein 1; crystal structure of u5-15kd in a complex with pqbp1
c4okvE_ blood clotting Chain: E: anti-platelet aggregation protein; crystal structure of anopheline anti-platelet protein with fab2 antibody
c3wdjA_ hydrolase Chain: A: type i pullulanase; crystal structure of pullulanase complexed with maltotetraose from2 anoxybacillus sp. lm18-11
c3wa8B_ rna binding protein Chain: B: crispr-associated protein, cse2 family; crystal structure of m. ruber casb


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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