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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2013 Jun 29

Fold library idPDB HeaderMoleculeTitle
c4jyaU_ ribosome Chain: U: 30s ribosomal protein thx; crystal structures of pseudouridinilated stop codons with asls
c3vw5B_ isomerase Chain: B: cellobiose 2-epimerase; crystal structure of sugar epimerase from ruminal bacterium
c4kppA_ membrane protein Chain: A: putative uncharacterized protein; crystal structure of protein
c3vvfA_ transport protein Chain: A: amino acid abc transporter, binding protein; crystal structure of ttc0807 complexed with arginine
c2lufA_ de novo protein Chain: A: retro trp-cage peptide; retro trp-cage peptide
c4dmoB_ transferase Chain: B: n-hydroxyarylamine o-acetyltransferase; crystal structure of the (baccr)nat3 arylamine n-acetyltransferase2 from bacillus cereus reveals a unique cys-his-glu catalytic triad
c4l5pD_ lyase Chain: D: 5-carboxyvanillate decarboxylase; crystal structure of 5-carboxyvanillate decarboxylase from2 sphingomonas paucimobilis complexed with 4-hydroxy-3-methoxy-5-3 nitrobenzoic acid
c4fwvA_ hydrolase Chain: A: ttc1975 peptidase; crystal structure of the n-terminal domain of the lon-like protease2 mtalonc
c4fw9A_ hydrolase Chain: A: ttc1975 peptidase; crystal structure of the lon-like protease mtalonc
c4awaA_ hydrolase/hydrolase inhibitor Chain: A: legumain; crystal structure of active legumain in complex with yvad-cmk2 at ph 5.0
c4kqaC_ transferase Chain: C: protein h03a11.1; crystal structure of the golgi casein kinase
c4jbkA_ dna binding protein/dna Chain: A: interferon-activable protein 202; molecular basis for abrogation of activation of pro-inflammatory2 cytokines
c4jl3B_ transcription/dna Chain: B: transcriptional regulator, tetr family; crystal structure of ms6564-dna complex
c4k0kU_ ribosome Chain: U: 30s ribosomal protein thx; crystal structure of the thermus thermophilus 30s ribosomal subunit2 complexed with a serine-asl and mrna containing a stop codon
c3zpyB_ lyase Chain: B: alginate lyase, family pl7; crystal structure of the marine pl7 alginate lyase alya12 from zobellia galactanivorans
c4l82D_ oxidoreductase Chain: D: rifea.00250.a; structure of a putative oxidoreductase from rickettsia felis
c4k5uD_ immune system Chain: D: variable lymphocyte receptor; recognition of the bg-h antigen by a lamprey variable lymphocyte2 receptor
c2luwA_ hydrolase Chain: A: metalloprotease; solution structure of vep c-ter 100
c4kjsB_ transport protein Chain: B: cation exchanger yfke; structure of native yfke
c4juwU_ ribosome Chain: U: 30s ribosomal protein thx; crystal structure of the ribosome bound to elongation factor g in the2 guanosine triphosphatase state (this file contains the 30s subunit)
c4fqeA_ membrane protein Chain: A: oligogalacturonate-specific porin kdgm; kdgm porin
c4l8eA_ transferase Chain: A: glutathione s-transferase enzyme with thioredoxin-like crystal structure of a glutathione transferase family member from2 xenorhabdus nematophila, target efi-507418, with two gsh per subunit
c4b2zB_ transport protein Chain: B: oxysterol-binding protein homolog 6; structure of osh6 in complex with phosphatidylserine
c4fypA_ plant protein Chain: A: vegetative storage protein 1; crystal structure of plant vegetative storage protein
c4k8wA_ cell adhesion Chain: A: lepa; an arm-swapped dimer of the s. pyogenes pilin specific assembly factor2 sipa
c4kzkA_ sugar binding protein Chain: A: l-arabinose abc transporter, periplasmic l-arabinose- the structure of the periplasmic l-arabinose binding protein from2 burkholderia thailandensis
c4kqxB_ oxidoreductase/oxidoreductase inhibitor Chain: B: ketol-acid reductoisomerase; mutant slackia exigua kari ddv in complex with nad and an inhibitor
c4be3A_ lyase Chain: A: alginate lyase, family pl7; crystal structure of the exolytic pl7 alginate lyase alya52 from zobellia galactanivorans
c4jbmA_ dna binding protein/dna Chain: A: interferon-inducible protein aim2; structure of murine dna binding protein bound with ds dna
c4l11A_ metal transport Chain: A: agap007709-pa; structure of the c-linker/cnbhd of agerg channels
c4kncA_ sugar binding protein Chain: A: alginate biosynthesis protein algx; structural and functional characterization of pseudomonas aeruginosa2 algx
c4kmoB_ transport protein Chain: B: putative vacuolar protein sorting-associated protein; crystal structure of the vps33-vps16 hops subcomplex from chaetomium2 thermophilum
c4l1nA_ structural genomics, unknown function Chain: A: conserved lipoprotein, putative; crystal structure of a putative conserved lipoprotein (nt01cx_1156)2 from clostridium novyi nt at 2.70 a resolution
c4l8nA_ structural genomics, unknown function Chain: A: pdz domain protein; crystal structure of a pdz domain protein (bdi_1242) from2 parabacteroides distasonis atcc 8503 at 2.50 a resolution
c4juxJ_ ribosome Chain: J: 50s ribosomal protein l10; crystal structure of the ribosome bound to elongation factor g in the2 guanosine triphosphatase state (this file contains the 50s subunit)
c4jv5U_ ribosome Chain: U: 30s ribosomal protein thx; crystal structures of pseudouridinilated stop codons with asls
c4axkB_ isomerase Chain: B: 1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino) crystal structure of subhisa from the thermophile corynebacterium2 efficiens
c4i3fA_ hydrolase Chain: A: serine hydrolase ccsp0084; crystal structure of serine hydrolase ccsp0084 from the polyaromatic2 hydrocarbon (pah)-degrading bacterium cycloclasticus zankles
c4hbkA_ oxidoreductase Chain: A: aldo-keto reductase family 1, member b4 (aldose reductase); structure of the aldose reductase from schistosoma japonicum
c3zpmA_ surfactant protein Chain: A: latherin; solution structure of latherin
c4fk9A_ hydrolase Chain: A: cellulose-binding family ii; high resolution structure of the catalytic domain of mannanase2 sacte_2347 from streptomyces sp. sirexaa-e
c4hzhB_ hydrolase Chain: B: prothrombin; structure of recombinant gla-domainless prothrombin mutant s525a
c4l6eA_ ligase, isomerase Chain: A: e3 sumo-protein ligase ranbp2; crystal structure of the ranbd1 fourth domain of e3 sumo-protein2 ligase ranbp2. northeast structural genomics consortium (nesg) target3 hr9193b


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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