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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kalA_

Fold library idPDB HeaderMoleculeTitle
c7kalA_4.00PDB header: protein transportChain: A: PDB Molecule: protein transport channel sec61 complex, alpha subunit


Added to library: Sat Jan 9 20:40:04 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LIKPFTPLLPEVAAPETKVPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDASNRGTLMELGITPIISSGM
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Known secondary structure (DSSP)


TTTTTS





SS


T


SS

S



SSSSS
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFQLLAGTHVNLDLKTDRELYQTAQKLFAIILSFGQACVHVLTGLYGQPSDLGAGICVLLIVQLVVAGLV
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Known secondary structure (DSSP)


S

SSSS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VILLDELLQKGYGLGSGISLFIATNICESIVWKAFSPTTINTGRGPEFEGAIIALFHLLLTWPDKQRALR
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Known secondary structure (DSSP) TTTSSS
S




SSS
SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EAFYRQSLPNIMNLLATLLVFAAVIYLQGFRVEIPVKSARQRGVRGSYPVRLFYTSNMPIMLQSALCSNV
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Known secondary structure (DSSP) T

SS

T
B

SSSTT




BSS
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FLISQMLYSRFSDNLLVRLLGVWEPLHAASGIAYYMSPPLNFKEALLDPVHTVVYITFMLVACALFSKTW
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Known secondary structure (DSSP) TT

SSS


SSS


STS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IEVSGSSPRDVAKQLKDQGLVMAGHREQSMYKELKRVIPTAAAFGGACIGALSVASDLLGALGSGTGILL
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Known secondary structure (DSSP) TT

T

SSS

T
SS
 .........430.......
Sequence AVTIIYGYFEMAAREGD
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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