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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6yalk_

Fold library idPDB HeaderMoleculeTitle
c6yalk_3.00PDB header: translationChain: K: PDB Molecule: 40s ribosomal protein es8;


Added to library: Sat Apr 11 10:45:26 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIV
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Known secondary structure (DSSP)






TT

TTSSTTT
SGGGTT

S

SSSS


STT




T
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEI
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Known secondary structure (DSSP)





S
S

SSSSS







TTS

TTSSTTSS



SSSS


SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERN
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Known secondary structure (DSSP) TTTSTTTSS



B
S
STTTTTSS


TTTT

TT

SSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLS
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Known secondary structure (DSSP) GGG

S

S
SS

SS

TT
TTT




SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGM
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Known secondary structure (DSSP) STTT


SS


SSS







SS







S












 .........360.........370.........380.........390.........400.........410.........420
Sequence KKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGS
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Known secondary structure (DSSP)
SS







TT



STTSS
SSS

SS




SS


SS





S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLD
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Known secondary structure (DSSP) TTS
S
SS
SSTSSSSS


TTTSS
STT

TTSSSS


SSTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence SEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPSKNTVANSPQTLLAGMNKFLSQLE
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Known secondary structure (DSSP) TT




TT
SS
TTT
TT
 .........570.........580.........590.....
Sequence ITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLD
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Known secondary structure (DSSP)

TTTT

SS
STTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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