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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v5bA_

Fold library idPDB HeaderMoleculeTitle
c6v5bA_3.70PDB header: rna binding protein/rnaChain: A: PDB Molecule: ribonuclease 3;


Added to library: Sat Apr 11 08:42:21 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAAVFDVIAEIKRKKAHPDRL
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Known secondary structure (DSSP)

B





SS
B

GGG

TT
S
B

S

STTTTT


S







T

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence HDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDR
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Known secondary structure (DSSP) SSSS



SS
TTS
SS
SS
SSTTTS
SSSS

TT







SSS

TTT
SS
SSSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILE
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Known secondary structure (DSSP)

TTSS







SSS




S

STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIANMLQWEEL
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Known secondary structure (DSSP)





SSS

SS





S


TTS
B



TS
S
SS
S

GGGTSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYV
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Known secondary structure (DSSP) T

S
B

SS
SS
S



BS




S
TT




BB
SS



TTTSTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTH
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Known secondary structure (DSSP) TS
S


SSSTTSSS
S




B


S


B
S

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence HIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
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Known secondary structure (DSSP) TT



S
TS

TT

S

SS
SS
S







SSSSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence KKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQH
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Known secondary structure (DSSP) SS
STTT



SS






SSTT
TT

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVW
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Known secondary structure (DSSP) TTTGGGT



SSSSS
SSS


S
 .........640.........650.........660.........670.........680.........690.........700
Sequence LNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEF
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Known secondary structure (DSSP) S



TSSS

TTSSTT
SST



S
S

SS



SSS
S
STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence LGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLA
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Known secondary structure (DSSP)
TT

SSSST
GGG


SSSS
SS



 .........780.........790.........800.........810.........820.........830.........840
Sequence DLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQ
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Known secondary structure (DSSP) S
TGGGSSS
TTT




SSS





 .........850.........860.........870.........880.........890.........900........
Sequence TVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMR
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Known secondary structure (DSSP) S
TTS
TTSSS

T
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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