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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v46E_

Fold library idPDB HeaderMoleculeTitle
c6v46E_2.25PDB header: viral proteinChain: E: PDB Molecule: hemagglutinin ha1 chain;


Added to library: Sat Jun 20 08:54:02 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRICIGYQSNNSTDTVNTLIEQNVPVTQTMELVETEKHPAYCNTDLGAPLELRDCKIEAVIYGNPKCDIH
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Known secondary structure (DSSP)









S




SS
SSBS




B
SBTTB

SSB
T
TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence LKDQGWSYIVERPSAPEGMCYPGSVENLEELRFVFSSAASYKRIRLFDYSRWNVTRSGTSKACNASTGGQ
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Known secondary structure (DSSP)

TT
BS

TT

BS
SSS

BTTTS
BS


GGGSS




SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SFYRSINWLTKKKPDTYDFNEGAYVNNEDGDIIFLWGIHHPPDTKEQTTLYKNANTLSSVTTNTINRSFQ
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Known secondary structure (DSSP)

SS
BTTTB




SSS

SSSSSS


SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence PNIGPRPLVRGQQGRMDYYWGILKRGETLKIRTNGNLIAPEFGYLLKGESYGRIIQNEDIPIGNCNTKCQ
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Known secondary structure (DSSP)







BTTBS

TT
SS

S





SS


S
 .........290.........300.........310.........320...
Sequence TYAGAINSSKPFQNASRHYMGECPKYVKKASLRLAVGLRNTPS
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Known secondary structure (DSSP) TT


SS
S
S
S




S


S
B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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