Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u05A_

Fold library idPDB HeaderMoleculeTitle
c6u05A_1.95PDB header: transferaseChain: A: PDB Molecule: trna ligase;


Added to library: Sat Nov 9 08:27:03 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTTKYIFVPIATIGCGKTTVFNTLNNLFPQWTHIQNDNISKKAKLKICDLTLLALEDDDQSVVLFDRNNS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)



TTSS
TTSGGGS
TT
SS
TTSSTT





 .........80.........90.........100.........110.........120.........130.........140
Sequence ASRERRQIFTTIDQKRDEHLDDTVDLKYIAINFIPEDLSEEELWDITYNRVIQLDENLVESVMKGFIQRY
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) SGGGTS
TT

S
TT





SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPINTSRSPDDQFDHVIHLKLSKDENSLKSSLENVRIIIDDLVQNFPDLIKEKPADELINECFQKALDYK
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



TTSTTGGG
S





TTSS

TTT
SS


TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PTFVKNMTANTIKKDPTYYGIAMHYSSILENLEIVSHNEHFQNIKSHIQTEFHVTLGHIASSKQDKAGRV
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)



TTTS







S
TTTTTTT
GGGTTB
SSGGGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KWKKLVKTLGKGDPNKPKSALKFFADVKLLQIVINTDKLACIKVEILKIYDTNDVLQSEIEPINKQLHIT
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) S



SSSSTTTTT

B
TT


S
SS
 .........360.........370.........380.........390.........400.........410...
Sequence IGCIPPATAVESNITLEELYDNPDEQELKPDGTYKCGDDTLHVFNFDNPDLKLFSQQLFVAYQ
Predicted secondary structure




























SS confidence






























































Known secondary structure (DSSP)
TTS
TTT

TT

S


STT
S
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D