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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tfqB_

Fold library idPDB HeaderMoleculeTitle
c6tfqB_2.05PDB header: transport proteinChain: B: PDB Molecule: abc transporter substrate-binding protein;


Added to library: Sat Jan 25 11:27:52 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKTELSXGVASEDVTTLDPHFATTTSDRTLVSYIYGALVRFAPGSANPSSIEADLAESWESNADQLVWTF
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Known secondary structure (DSSP)


S
S





TTT

S


S

TT


GGG
SSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLRPDVKWQGGYGNVTADDVVFSLDKARDPKRSAFSGDYAAIQKVEAVDAKTVRITLTRRVPSLLALLSN
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Known secondary structure (DSSP)
TT
B
STT

B

T
TTS
S
GGGGTTTTSS

TTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSGGFIIPKKAFKERGDDFKRRPVGFGPFQVESIQPGQSVTLTANAEYFRGKPKLSKISYRFLNNEAARD
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Known secondary structure (DSSP) SGGG



GGGTTTS


SSSTTT
TT
TT


S
S


 .........220.........230.........240.........250.........260.........270.........280
Sequence LAFESGELDVEQGNQDQRWLQRLTANPENVVDTIEPAELNLLHINITKPPFNDIRVRQALAHTVNAAQIA
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Known secondary structure (DSSP) TS
S

S
TSTT
TTSTTTTSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence KYRGERVNRAVPSVIPSNNLGFDPDAGVLNYDPAQSKKLLAEAGFPNGVTVTXVASQLPGLESLAQLIQA
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Known secondary structure (DSSP)
TTT
SSSS
TTSBT

TTS





TT
TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QVAEGGFTLNLQPVEHAAWHQXIRKDLSPIVLYGAARFPIADYYLTQFYHSASEIGKPTQVVNFSHCNVA
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Known secondary structure (DSSP) TTTT
TTT

S


SBSGGGBTTSTT

SB
S


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DKQIEAARTETDPNKQIELWKEAQKLIVSNVCAIPLTENLGTWARKNKLGWGFELKGSXPSAPLITEQTY
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Known secondary structure (DSSP)

STSTT
SS

SB
TTSS



TT
 ...
Sequence FKD
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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