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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tdaL_

Fold library idPDB HeaderMoleculeTitle
c6tdaL_15.00PDB header: dna binding proteinChain: L: PDB Molecule: chromatin structure-remodeling complex protein rsc8,


Added to library: Sat Mar 21 08:57:55 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQEAQKLEEKALRFLAKQTHPVIIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINT
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Known secondary structure (DSSP)
T




S

SS




SS


SS


STTS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence YRLSPYEYLTITAVRRNVAMDVASIVKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLV
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Known secondary structure (DSSP) T
TTS




S
TTSSS



TTSS




SS
S









TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence YICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNWSDQEMLLLLEGIEMYEDQW
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Known secondary structure (DSSP)
B
SSS

B

SSSSTT

SS

S
TTS
TTS




SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EKIADHVGGHKRVEDCIEKFLSLPIEDNYIREVVGSKLMECVNDAVQTLLDKLGKVSDKSREISEKYIEE
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Known secondary structure (DSSP) SS


S
TTT

SSTTT


S



 .........290.........300.........310.........320.........330.........340.........350
Sequence SQAIIQELVKLTMEKLESKFTKLCDLETQLEMEKLKYVKESEKMLNDRLSLSKQILDLNKSLEELNVSIP
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Known secondary structure (DSSP) TTTTTTSS



 .........360.........370.........380.........390.........400.........410.........420
Sequence SFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITAVRRNVAMDVASI
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Known secondary structure (DSSP) SS
TT

SSS

TT
GGGTS


SS

TT
TTS


TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VKIHAFLEKWGLINYQIDPRTKPSLIGPSFTGHFQVVLDTPQGLKPFLPVKKNWSDQEMLLLLEGIEMYE
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Known secondary structure (DSSP) TSSSSTTS

SS
S








SSS
TT









S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIREVVGSIEESQAIIQELVKLTMEKLESKFTKLCDLET
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Known secondary structure (DSSP) S
T
SS
SSSSTTTS




 .........570.........580.........590......
Sequence QLEMEKLKYVKESEKMLNDRLSLSKQILDLNKSLEE
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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